Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001461-TA|BGIBMGA001461-PA|IPR001071|Cellular
retinaldehyde binding/alpha-tocopherol transport, IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal,
IPR011074|Phosphatidylinositol transfer protein-like, N-terminal
(520 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 45 1e-04
Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical pr... 41 0.002
U58734-6|AAB52505.3| 383|Caenorhabditis elegans Hypothetical pr... 40 0.004
Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical pr... 39 0.010
Z81493-7|CAE46664.1| 342|Caenorhabditis elegans Hypothetical pr... 36 0.069
Z81493-6|CAB04038.1| 335|Caenorhabditis elegans Hypothetical pr... 36 0.069
AF077545-3|AAC26304.1| 396|Caenorhabditis elegans Hypothetical ... 33 0.49
Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 30 3.4
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 30 3.4
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 30 3.4
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 30 3.4
Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical pr... 30 4.5
AF016674-3|AAB66128.1| 558|Caenorhabditis elegans Hypothetical ... 29 6.0
Z70205-6|CAH60748.1| 421|Caenorhabditis elegans Hypothetical pr... 29 7.9
>Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical
protein T13H5.2 protein.
Length = 408
Score = 45.2 bits (102), Expect = 1e-04
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 138 VIMDVKDISLKFITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLKPFMK 197
VI D+ +S+ I + V + ++ P +++I IVN P F+ L++++ P +
Sbjct: 172 VIFDLDGLSMVQIDLAALKVVTTMLSQLQEMFPDVIRKIFIVNTPTFIQVLWSMISPCLA 231
Query: 198 QEITNMIHFHTPN-SQTLYDFVKKEDLPSDYGGTRKSMVEFNKDAMELLESRNCYYDLDN 256
++ + + Q L + + +E L +GGTRK+ E+ M YD N
Sbjct: 232 KQTQQKVKILGNDWKQHLKENIGEEVLFERWGGTRKAETEYGNVRMGGKIPAELKYDPAN 291
Query: 257 ---AKSALELFVSIRNET 271
A+ +L VS R+ T
Sbjct: 292 DLPAEKLTKLNVSARSTT 309
Score = 29.5 bits (63), Expect = 6.0
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 378 PMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKI 412
P +++I ++NTP + ++S+ P L ++K+
Sbjct: 204 PDVIRKIFIVNTPTFIQVLWSMISPCLAKQTQQKV 238
>Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical
protein F28H7.8 protein.
Length = 410
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 178 IVNAPPFVDKLYALLKPFMKQEITNMIHFHTPN-SQTLYDFVKKEDLPSDYGG 229
++N+P +++ L++ L PF+ ++ I F N + L D V KE LP YGG
Sbjct: 199 VINSPSYINVLWSALSPFIPEQSKQRIVFAGSNWKEELLDIVDKECLPERYGG 251
>U58734-6|AAB52505.3| 383|Caenorhabditis elegans Hypothetical
protein T27A10.7 protein.
Length = 383
Score = 39.9 bits (89), Expect = 0.004
Identities = 20/97 (20%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 137 MVIMDVKDISLKFITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLKPFM 196
++IMD+ S+ + + V L ++ P ++I+I+N P + +YA++ P +
Sbjct: 164 IIIMDLDGFSMDLLYTPTLKVYMSLLTMLQNIFPDFARRIYIINCPAMMSAVYAMVSPVL 223
Query: 197 KQEITNMIHFHTPN-SQTLYDFVKKEDLPSDYGGTRK 232
+ + F + L + + +E++ +GG +K
Sbjct: 224 SSQTREKVRFLDKDWKNHLIEEIGEENIFMHWGGVKK 260
Score = 38.7 bits (86), Expect = 0.010
Identities = 15/59 (25%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 382 KQIHVINTPLIVDKIYSLFKPLLKSDVKEKIHFHTPN-SNTLFDYVHKDDLPKDLGGIR 439
++I++IN P ++ +Y++ P+L S +EK+ F + N L + + ++++ GG++
Sbjct: 201 RRIYIINCPAMMSAVYAMVSPVLSSQTREKVRFLDKDWKNHLIEEIGEENIFMHWGGVK 259
>Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical
protein F18A11.2 protein.
Length = 388
Score = 38.7 bits (86), Expect = 0.010
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 378 PMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIHFHT-PNSNTLFDYVHKDDLPKDLG 436
P L++I ++N P V+ ++ P L D KEKI + P + + K LP DLG
Sbjct: 181 PQLLQKIIIVNAPSFVNVLHQACSPFLPEDYKEKIVITSEPAIGAIQKHADKCFLPSDLG 240
Query: 437 G 437
G
Sbjct: 241 G 241
Score = 36.7 bits (81), Expect = 0.040
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 167 DAMPIRLKQIHIVNAPPFVDKLYALLKPFMKQEITNMIHFHT-PNSQTLYDFVKKEDLPS 225
D P L++I IVNAP FV+ L+ PF+ ++ I + P + K LPS
Sbjct: 178 DHYPQLLQKIIIVNAPSFVNVLHQACSPFLPEDYKEKIVITSEPAIGAIQKHADKCFLPS 237
Query: 226 DYGG 229
D GG
Sbjct: 238 DLGG 241
>Z81493-7|CAE46664.1| 342|Caenorhabditis elegans Hypothetical
protein F01D5.7b protein.
Length = 342
Score = 35.9 bits (79), Expect = 0.069
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 402 PLLKSDVKEKIHFHTPNSNTLFDYVHKDDLPKDLGGIRDSLDIYTKKMKEMMLTKRYVSL 461
P + S++ K+ FH P+ + K D KDL +RD D + + L R
Sbjct: 33 PPIPSEIIRKLAFHPPDKGATYRIELKSDPEKDLESVRDCHD------EPVQLVVRDRVH 86
Query: 462 TDMKLDKAMFDHRFSRVVDMKKNPDCNYEDYEVIIKVVLRCR 503
++K+ ++ S +V +K +P+C ++ EV +VVL C+
Sbjct: 87 PEVKV-FSVTTSEDSHLVCVKCSPNCYSKNPEVANQVVLFCQ 127
>Z81493-6|CAB04038.1| 335|Caenorhabditis elegans Hypothetical
protein F01D5.7a protein.
Length = 335
Score = 35.9 bits (79), Expect = 0.069
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 402 PLLKSDVKEKIHFHTPNSNTLFDYVHKDDLPKDLGGIRDSLDIYTKKMKEMMLTKRYVSL 461
P + S++ K+ FH P+ + K D KDL +RD D + + L R
Sbjct: 33 PPIPSEIIRKLAFHPPDKGATYRIELKSDPEKDLESVRDCHD------EPVQLVVRDRVH 86
Query: 462 TDMKLDKAMFDHRFSRVVDMKKNPDCNYEDYEVIIKVVLRCR 503
++K+ ++ S +V +K +P+C ++ EV +VVL C+
Sbjct: 87 PEVKV-FSVTTSEDSHLVCVKCSPNCYSKNPEVANQVVLFCQ 127
>AF077545-3|AAC26304.1| 396|Caenorhabditis elegans Hypothetical
protein H41C03.1 protein.
Length = 396
Score = 33.1 bits (72), Expect = 0.49
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 168 AMPIRLKQIHIVNAPPFVDKLYALLKPFMKQEITNMIHFHTPNSQ---TLYDFVKKEDLP 224
A P + + ++NAP F+ L+ + P + + N + + NS ++ +++P
Sbjct: 175 AYPEWINTLFLINAPSFMTLLWKAIGPLLPERTRNKVRICSGNSDWKTSVQKHAHIDNIP 234
Query: 225 SDYGGTRKSMVEFNKDAM 242
+GGT +V+ N D M
Sbjct: 235 KHWGGT---LVDKNGDGM 249
Score = 32.7 bits (71), Expect = 0.64
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 376 AMPMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIHFHTPNSN---TLFDYVHKDDLP 432
A P + + +IN P + ++ PLL + K+ + NS+ ++ + H D++P
Sbjct: 175 AYPEWINTLFLINAPSFMTLLWKAIGPLLPERTRNKVRICSGNSDWKTSVQKHAHIDNIP 234
Query: 433 KDLGG 437
K GG
Sbjct: 235 KHWGG 239
>Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical
protein T23G5.2a protein.
Length = 719
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/62 (22%), Positives = 33/62 (53%)
Query: 138 VIMDVKDISLKFITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLKPFMK 197
+++D+ +S++ + + V K+ + E P + Q+ +V AP L+ L+ PF+
Sbjct: 394 LVVDLDGLSMRHLWRPGVQCLLKIIEIVEANYPETMGQVLVVRAPRVFPVLWTLISPFID 453
Query: 198 QE 199
++
Sbjct: 454 EK 455
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
protein F16B12.6 protein.
Length = 1392
Score = 30.3 bits (65), Expect = 3.4
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 236 EFNKDAMELLESRNCYYDLDNAKSALELFVSIRNETPELFTNRDPLSPSIQETMKIVKMA 295
EFN D ++ E+ N YYD S +++++R++ +L T D + I + + +
Sbjct: 724 EFNDDPIDKAENPNAYYDEPRVLSTGHVYLTVRHK--KLVTVMDHVLEWIANSNIVEERG 781
Query: 296 VYETTDKKH 304
V T H
Sbjct: 782 VLNDTKPSH 790
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 149 FITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLKPFMKQEI 200
+ TK+ S+ L KY +P ++ ++PPF P MKQEI
Sbjct: 608 YATKYCHSLKLHLKKYNHRRVPEGIEMSGGDSSPPFTSDATITFSPLMKQEI 659
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 149 FITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLKPFMKQEI 200
+ TK+ S+ L KY +P ++ ++PPF P MKQEI
Sbjct: 630 YATKYCHSLKLHLKKYNHRRVPEGIEMSGGDSSPPFTSDATITFSPLMKQEI 681
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 149 FITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLKPFMKQEI 200
+ TK+ S+ L KY +P ++ ++PPF P MKQEI
Sbjct: 630 YATKYCHSLKLHLKKYNHRRVPEGIEMSGGDSSPPFTSDATITFSPLMKQEI 681
>Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical
protein R03D7.8 protein.
Length = 596
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 361 YNSILGKTISKYQGGAMPM-RLK-QIHVINTPLIVDKIYSLFKPLLKSDVKEKIHFHTPN 418
+ +I+GK++ G PM R K IH + P+ + + ++ + ++ + ++ + PN
Sbjct: 459 FAAIIGKSVLAVYSGFSPMIREKGHIHHLFRPVTAEHMNAVERHIIFNQPSNRVRMYRPN 518
Query: 419 SNTLFDYVHK 428
NT D+ K
Sbjct: 519 PNTEGDWFGK 528
>AF016674-3|AAB66128.1| 558|Caenorhabditis elegans Hypothetical
protein C03H5.5 protein.
Length = 558
Score = 29.5 bits (63), Expect = 6.0
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 203 MIHFHTPNSQTLYDFVKKEDLPSDYGGTRKSMVEFNKDAMELLESRNCYYD-LDNAKSAL 261
M TPN T K D+ +Y M+ N LLE +NCYYD L+ + L
Sbjct: 82 MSELPTPNEDT-----KATDIVLEYLAHFSKMIAENN----LLEIQNCYYDRLETVQKQL 132
Query: 262 ELFVSIRNETPELFTNRDPLSPSIQETMKIVKMAVY 297
+ P+ T R +SP Q+ M + K Y
Sbjct: 133 PPSFT----WPDEITVRKSISPENQDFMVLYKELKY 164
>Z70205-6|CAH60748.1| 421|Caenorhabditis elegans Hypothetical
protein C11H1.9a protein.
Length = 421
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 378 PMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIHFHTPNS-NTLFDYVHKDDLPKDLG 436
P + + ++N + Y + K ++ + EK H + TL + ++ DD+P LG
Sbjct: 199 PELVTPVDMVNIAKWIHVPYKIAKAMMPTGFSEKFRLHDRHFIETLTEDINIDDIPVSLG 258
Query: 437 G 437
G
Sbjct: 259 G 259
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.137 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,945,037
Number of Sequences: 27539
Number of extensions: 565590
Number of successful extensions: 1246
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1218
Number of HSP's gapped (non-prelim): 30
length of query: 520
length of database: 12,573,161
effective HSP length: 85
effective length of query: 435
effective length of database: 10,232,346
effective search space: 4451070510
effective search space used: 4451070510
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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