Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001460-TA|BGIBMGA001460-PA|IPR002112|Transcription
factor Jun, IPR004827|Basic-leucine zipper (bZIP) transcription
factor, IPR008917|Eukaryotic transcription factor, DNA-binding,
IPR011616|bZIP transcription factor, bZIP_1
(356 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1021 + 25364349-25364465,25367237-25367324,25367851-253680... 33 0.26
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 33 0.46
03_06_0301 - 32974276-32974638,32974842-32974967,32975056-329751... 33 0.46
07_03_1473 + 26756338-26757583,26759067-26759472,26760867-267609... 32 0.61
02_01_0365 + 2621302-2621711,2622442-2622620,2623381-2623496,262... 32 0.61
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 32 0.81
01_01_0626 - 4713943-4714515,4714645-4714853,4717310-4717628 32 0.81
05_04_0300 - 19969066-19969535,19971216-19972686 31 1.1
02_01_0773 - 5760034-5760386,5760889-5760925,5761069-5761225,576... 31 1.1
02_01_0558 + 4109929-4110042,4110989-4111097,4111404-4111563,411... 31 1.4
03_02_0743 + 10876178-10876699 31 1.9
02_05_0941 + 32953065-32953089,32954252-32954406,32954486-329545... 31 1.9
02_02_0373 - 9534016-9534226,9534251-9534297,9534453-9534500,953... 31 1.9
08_02_0371 + 16365528-16365728,16366471-16366812 30 3.3
07_03_1447 + 26587436-26587497,26588479-26589130,26589247-265893... 30 3.3
01_01_0518 - 3810290-3810397,3810469-3810851,3810949-3811069 30 3.3
07_01_0586 - 4354613-4354996,4355537-4355662,4355752-4355827,435... 29 4.3
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 29 5.7
05_05_0337 - 24176184-24176858 29 5.7
02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098 29 5.7
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458... 29 7.5
09_01_0111 + 1727021-1727206,1727324-1727373,1727440-1727491,172... 29 7.5
08_02_1501 + 27568934-27569287,27569372-27569458 29 7.5
07_03_1729 + 29091765-29092358,29092468-29092539,29093187-29093330 29 7.5
01_06_1033 + 33955883-33956374 29 7.5
09_02_0358 + 7818189-7818368,7818786-7819067 28 9.9
06_03_1449 - 30239342-30239377,30239804-30239881,30241802-30242152 28 9.9
06_03_1431 - 30105385-30105420,30105847-30105924,30107845-30108195 28 9.9
06_03_1419 + 30048230-30048580,30050596-30050673,30051100-30051135 28 9.9
03_05_0952 + 29103879-29103983,29104103-29104600,29104693-291047... 28 9.9
02_03_0349 + 18010414-18014283 28 9.9
01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399... 28 9.9
>12_02_1021 +
25364349-25364465,25367237-25367324,25367851-25368004,
25368196-25368271,25368350-25368475,25369400-25369744
Length = 301
Score = 33.5 bits (73), Expect = 0.26
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SA+ SRKRK+ +++ LE +V Q +EN +L +R+
Sbjct: 127 SARRSRKRKQAHLNDLESQVSQLRSENASLQKRL 160
>06_03_0672 +
23359510-23361253,23389969-23390203,23392078-23392234,
23392535-23392597
Length = 732
Score = 32.7 bits (71), Expect = 0.46
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SAQ +R+RKK Y+ LE RVK N L R+
Sbjct: 667 SAQQARERKKAYMSELEARVKDLERSNSELEERL 700
>03_06_0301 -
32974276-32974638,32974842-32974967,32975056-32975131,
32975935-32976130,32976666-32976759,32977773-32978195
Length = 425
Score = 32.7 bits (71), Expect = 0.46
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SA+ SR RK +++ LE +V Q EN +L+RR+
Sbjct: 245 SARRSRSRKAAHLNELEAQVSQLRVENSSLLRRL 278
>07_03_1473 +
26756338-26757583,26759067-26759472,26760867-26760930,
26760975-26761055,26763350-26763588,26763689-26763947,
26764359-26764538,26764937-26765092,26765174-26765350
Length = 935
Score = 32.3 bits (70), Expect = 0.61
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SA SR+RKK+YV+ LE +VK A L RI
Sbjct: 124 SAHQSRQRKKQYVEELEGKVKVMQATIADLTARI 157
>02_01_0365 +
2621302-2621711,2622442-2622620,2623381-2623496,
2623626-2623964,2624113-2624307,2624505-2624594,
2625288-2625518,2625632-2625952
Length = 626
Score = 32.3 bits (70), Expect = 0.61
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 204 IDDGEFNMDELITFNRPHSDHDYQVVKSLDTHKVLPNGYVDLPIDEDWPPNLKKRMK 260
ID GE + E++T RP D DY + + P G + DEDW N +K+ +
Sbjct: 321 IDFGEDGLAEILTHQRPRRDVDYTQLNEQMFGE--PIGNDEQSEDEDWGLNKRKKRR 375
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 31.9 bits (69), Expect = 0.81
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 248 DEDWPPNLKKRMKKLEFDYEDGRDYLTPV---VKEENYGSYKIEAKIKPDLTEDFLTNTL 304
D+D P+ KKR K LE+D ++ D P+ +E++Y S K +AK +D +
Sbjct: 440 DDDITPS-KKRNKALEYDTDEDEDDADPMKSDSEEDDYDSEKEKAKKNSSDAKDTASKKK 498
Query: 305 LSTG 308
+TG
Sbjct: 499 AATG 502
>01_01_0626 - 4713943-4714515,4714645-4714853,4717310-4717628
Length = 366
Score = 31.9 bits (69), Expect = 0.81
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 299 FLTNTLLSTGRKLGELFDIMPPIPVKNEDIVIEEVSDHETRN 340
F+ T S ++ LFD++P +P+ +V+E++ H T++
Sbjct: 154 FIRQTNSSRRKRRSSLFDMVPEMPMDESPVVVEQLMLHSTQD 195
>05_04_0300 - 19969066-19969535,19971216-19972686
Length = 646
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SAQ SR+RKK YV+ LE++VK + L RI
Sbjct: 185 SAQLSRQRKKRYVEELEEKVKSMHSVINDLNSRI 218
>02_01_0773 -
5760034-5760386,5760889-5760925,5761069-5761225,
5762584-5762773,5762873-5763154,5763582-5763645
Length = 360
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRR 172
SAQ +R+RKK Y++ LE +VK +N L R
Sbjct: 186 SAQQARERKKAYLNDLEVKVKDLEKKNSELEER 218
>02_01_0558 +
4109929-4110042,4110989-4111097,4111404-4111563,
4111721-4111796,4111984-4112109,4112233-4112484
Length = 278
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SA+ SRKRK+ ++ LE +V Q EN +L +++
Sbjct: 135 SARRSRKRKQAHLADLESQVDQLRGENASLFKQL 168
>03_02_0743 + 10876178-10876699
Length = 173
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTL 169
SAQ SR +K++YVDGL +Q EN +
Sbjct: 36 SAQRSRIKKQQYVDGLAVEAEQLRRENDAM 65
>02_05_0941 +
32953065-32953089,32954252-32954406,32954486-32954587,
32955089-32955140,32955237-32955349,32955542-32955610,
32955942-32956049,32956517-32956661,32957245-32957476,
32957567-32957853,32957951-32958087,32958520-32958667,
32959464-32959595,32960239-32960367,32960707-32960834,
32960911-32961075,32961462-32961587,32962088-32962161,
32962285-32962534,32962875-32963054,32963128-32963361,
32964771-32964840,32965065-32965177,32965403-32965511,
32965639-32965688,32965823-32965889,32966131-32966203,
32966393-32966448,32966729-32966831,32967377-32967458,
32967717-32967779,32967918-32967977,32968356-32968448,
32968561-32968623,32968699-32968797
Length = 1363
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 251 WPPNLKKRMKKLEFDYEDGRDYLTPVVKEENYGSYKIEAKIKPDLTEDFLTNTLLS 306
W P+ + + + E +Y + + + Y ++KI KP L E+FL N L+
Sbjct: 194 WSPSSRTALAEAELEYSENH------ISKSMYAAFKITNLSKPGLLEEFLPNLCLA 243
>02_02_0373 -
9534016-9534226,9534251-9534297,9534453-9534500,
9534772-9534972,9535090-9535215,9535386-9535461,
9535617-9535776,9536074-9536182,9537225-9537398
Length = 383
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SA+ SRKRK+ ++ LE +V Q EN +L +++
Sbjct: 155 SARRSRKRKQAHLADLETQVDQLRGENASLFKQL 188
>08_02_0371 + 16365528-16365728,16366471-16366812
Length = 180
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTL 169
SA+ SR RK++++D L +V Q ENQ L
Sbjct: 49 SAKRSRLRKQQHLDDLTSQVNQLKMENQQL 78
>07_03_1447 +
26587436-26587497,26588479-26589130,26589247-26589335,
26589794-26589858,26589967-26590022,26590107-26590227,
26590316-26590390,26590689-26590742,26590830-26590924,
26591004-26591178,26591293-26591537
Length = 562
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 294 DLTEDFLTNTLLSTGRKLGELF---DIMPPIPVKNEDIVIEEVSDHETRNTTE 343
D+ +L T G KLG + +I+PP+PV ++E ++D + N E
Sbjct: 360 DVFNSYLEKTPPLNGGKLGFYYKDHEILPPLPVGFHRYIVENLNDVTSNNLVE 412
>01_01_0518 - 3810290-3810397,3810469-3810851,3810949-3811069
Length = 203
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SAQ +R+RKK Y+ LE + K N L +R+
Sbjct: 123 SAQQARERKKAYMTELEAKAKDLELRNAELEQRV 156
>07_01_0586 -
4354613-4354996,4355537-4355662,4355752-4355827,
4356444-4356651,4356813-4356906,4357430-4357504,
4358200-4358622
Length = 461
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SA+ SR RK + LE++V EN +L+RR+
Sbjct: 274 SARRSRSRKAARLKDLEEQVSLLRVENSSLLRRL 307
>11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 145 RKRKKEYVDGLEDRVKQCTAENQTLIRRIK 174
R++KK + LE+ VK+ A NQ L++R++
Sbjct: 1074 RQKKKAHTAHLEEEVKRLRAINQQLVKRLQ 1103
>05_05_0337 - 24176184-24176858
Length = 224
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 145 RKRKKEYVDGLEDRVKQCTAENQTLIRRIK 174
R++KK + LE+ VK+ A NQ L++R++
Sbjct: 87 REKKKAHAAFLEEEVKKLRAANQQLLKRLQ 116
>02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098
Length = 142
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRIK 174
SA SR RK+ YV LE V++ EN L R K
Sbjct: 82 SALRSRARKRAYVQELEKEVRRLVNENLKLKRHCK 116
>10_08_0429 + 17845303-17845431,17845508-17845684,17845782-17845895,
17846386-17846520,17847659-17847790,17847919-17848071,
17848574-17848709,17849338-17849443,17849538-17849730,
17849803-17849963,17850227-17850442,17850732-17850997,
17851505-17851779,17851871-17852327,17853973-17854055,
17854260-17854469,17854897-17855373,17855462-17855743,
17855910-17856236,17856418-17856507,17856788-17856899,
17857004-17857104,17857524-17857568
Length = 1458
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 30 DLKNASNIKLAAANLLSQSKLNDLKESRNEYEY 62
D+K +K A++L S SK+ND++E + +Y
Sbjct: 1081 DMKLLQEVKFNASHLCSLSKINDIEELEAKLKY 1113
>09_01_0111 +
1727021-1727206,1727324-1727373,1727440-1727491,
1727553-1727598,1727671-1727690,1727897-1727983,
1729290-1729466,1729542-1729565,1729639-1729725,
1729799-1729870,1730622-1732496
Length = 891
Score = 28.7 bits (61), Expect = 7.5
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 248 DEDWPPNLKKRMKKLEFDYEDGRDYLTPVVKEENYGSYKIEAKIKPDLTEDFLTNTLLST 307
D + P +++ K L DG D + PVV + + G + +KP+ + L L T
Sbjct: 767 DIELPYSIENCEKALVEKDSDGEDSVAPVVTKLSSGESQYSESLKPEEAQGVLYIDLGMT 826
Query: 308 GRKLGEL 314
GEL
Sbjct: 827 AAVQGEL 833
>08_02_1501 + 27568934-27569287,27569372-27569458
Length = 146
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTL 169
SA+ SR RK+ Y+ LE V+ AEN L
Sbjct: 83 SAERSRARKQAYLQELEQEVRLLRAENAAL 112
>07_03_1729 + 29091765-29092358,29092468-29092539,29093187-29093330
Length = 269
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTL 169
SA SR RK+ Y + LE+++ + ENQ L
Sbjct: 189 SAARSRARKQAYTNELENKISRLEEENQRL 218
>01_06_1033 + 33955883-33956374
Length = 163
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 145 RKRKKEYVDGLEDRVKQCTAENQTLIRRIK 174
R++KK + LE+ VK+ NQ L+RR++
Sbjct: 29 REKKKAHAAFLEEEVKKLRTTNQQLLRRLQ 58
>09_02_0358 + 7818189-7818368,7818786-7819067
Length = 153
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTL 169
SA+ SR RK++++D L +V Q +NQ L
Sbjct: 42 SARRSRMRKQQHLDELTSQVNQLKNQNQQL 71
>06_03_1449 - 30239342-30239377,30239804-30239881,30241802-30242152
Length = 154
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRIK 174
SA SR RK+ YV+ LE V++ +N L ++ K
Sbjct: 108 SALRSRARKRAYVEELEKEVRRLVDDNLNLKKQCK 142
>06_03_1431 - 30105385-30105420,30105847-30105924,30107845-30108195
Length = 154
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRIK 174
SA SR RK+ YV+ LE V++ +N L ++ K
Sbjct: 108 SALRSRARKRAYVEELEKEVRRLVDDNLNLKKQCK 142
>06_03_1419 + 30048230-30048580,30050596-30050673,30051100-30051135
Length = 154
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRIK 174
SA SR RK+ YV+ LE V++ +N L ++ K
Sbjct: 108 SALRSRARKRAYVEELEKEVRRLVDDNLNLKKQCK 142
>03_05_0952 +
29103879-29103983,29104103-29104600,29104693-29104794,
29105552-29105898,29105967-29106153,29106242-29106417,
29106976-29107065,29107066-29107322,29107593-29107687,
29107801-29107920,29108111-29108230,29108410-29108508,
29108588-29108689,29108884-29109111
Length = 841
Score = 28.3 bits (60), Expect = 9.9
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 250 DWPPNLKKRMKKLEFDYEDGRDYLTPVVKEENYGSYKIEAKIKPDLTEDFLTNTLLSTGR 309
D P ++ + K E D D + + +E+++ K+ A+ + D DF+ + T
Sbjct: 26 DSPTSVLEDEKISECKNGDASDTVEAIKQEDDH--LKVLAEERAD---DFVDASSSLTVE 80
Query: 310 KLGELFDIMP-PIPVKNEDIVIEEVSDHETRNTTEVRS 346
D+ P P+PVK ED ++E V + + + + S
Sbjct: 81 LAANNGDLSPHPVPVKEEDQLLEPVKEEKADDFVDATS 118
>02_03_0349 + 18010414-18014283
Length = 1289
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 13 TIKDMKDLKSIKIINAADLKNASNIKLAAANLLSQSK 49
TI ++K+L+ I ++ + L+N NI+ AA +L Q +
Sbjct: 732 TIVELKNLRDIHHLHVSGLENVCNIEEAAEIMLDQKE 768
>01_07_0111 -
41137822-41138973,41139453-41139540,41139850-41139969,
41140165-41140211,41140796-41141029,41141305-41141505,
41141506-41143407,41144140-41145303,41145574-41145879
Length = 1737
Score = 28.3 bits (60), Expect = 9.9
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 10 LPVTIKDMKDLKSIKIINAADL-----KNASNIKLAAANLLSQSKLNDLKESRNEYEYEH 64
LP +I ++K L+ + I L K S KL+ NL S SKL L +S N EH
Sbjct: 700 LPESINNLKCLQHLDISGCCALQKLPGKFGSLAKLSFVNLSSCSKLTKLPDSLNLESLEH 759
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.133 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,884,067
Number of Sequences: 37544
Number of extensions: 334475
Number of successful extensions: 624
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 597
Number of HSP's gapped (non-prelim): 33
length of query: 356
length of database: 14,793,348
effective HSP length: 83
effective length of query: 273
effective length of database: 11,677,196
effective search space: 3187874508
effective search space used: 3187874508
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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