GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001460-TA|BGIBMGA001460-PA|IPR002112|Transcription
factor Jun, IPR004827|Basic-leucine zipper (bZIP) transcription
factor, IPR008917|Eukaryotic transcription factor, DNA-binding,
IPR011616|bZIP transcription factor, bZIP_1
         (356 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    26   1.4  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   5.6  

>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 6/49 (12%)

Query: 276 VVKEENYGSYKI----EAKIKPDLTEDFLTNTL--LSTGRKLGELFDIM 318
           V + +NY  Y++    EA+++     +  +++L  L T RKLG+ FDI+
Sbjct: 31  VARYDNYRLYRVTPHSEAQLRSVAAMEQASDSLIFLETARKLGDRFDIV 79


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 277 VKEENYGSYKIEAKIKPDLTEDFLTNTLLSTGRKLGELFDIMPPIP 322
           V E N G  ++   I+P   +D +  +L +    LGEL  + P IP
Sbjct: 588 VHESNDGQRQV-LHIQPFTAKDLVVRSLANRICDLGELTYLYPTIP 632


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.133    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 321,883
Number of Sequences: 2123
Number of extensions: 12407
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 2
length of query: 356
length of database: 516,269
effective HSP length: 65
effective length of query: 291
effective length of database: 378,274
effective search space: 110077734
effective search space used: 110077734
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 48 (23.4 bits)