Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001460-TA|BGIBMGA001460-PA|IPR002112|Transcription
factor Jun, IPR004827|Basic-leucine zipper (bZIP) transcription
factor, IPR008917|Eukaryotic transcription factor, DNA-binding,
IPR011616|bZIP transcription factor, bZIP_1
(356 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g11260.1 68418.m01315 bZIP protein HY5 (HY5) identical to HY5... 34 0.17
At2g22850.1 68415.m02713 bZIP transcription factor family protei... 33 0.29
At3g54620.1 68416.m06043 bZIP transcription factor family protei... 32 0.51
At5g24800.1 68418.m02928 bZIP transcription factor family protei... 32 0.67
At4g37730.1 68417.m05342 bZIP transcription factor family protei... 31 0.89
At3g17609.2 68416.m02248 bZIP transcription factor family protei... 31 1.2
At3g17609.1 68416.m02247 bZIP transcription factor family protei... 31 1.2
At3g56660.1 68416.m06301 bZIP transcription factor family protei... 31 1.6
At2g40950.1 68415.m05056 bZIP transcription factor family protei... 30 2.7
At5g28770.2 68418.m03535 bZIP transcription factor family protei... 29 4.7
At5g28770.1 68418.m03534 bZIP transcription factor family protei... 29 4.7
At5g08010.1 68418.m00932 expressed protein condensin subunit SMC... 29 4.7
At3g05110.1 68416.m00555 hypothetical protein 29 4.7
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 29 6.3
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 29 6.3
At2g18160.1 68415.m02113 bZIP transcription factor family protei... 29 6.3
At2g18220.1 68415.m02123 expressed protein contains Pfam domain ... 28 8.3
>At5g11260.1 68418.m01315 bZIP protein HY5 (HY5) identical to HY5
protein GI:2251085 from [Arabidopsis thaliana]
Length = 168
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SAQ +R+RKK Y+ LE+RVK +N L R+
Sbjct: 101 SAQQARERKKAYLSELENRVKDLENKNSELEERL 134
>At2g22850.1 68415.m02713 bZIP transcription factor family protein
contains a bZIP transcription factor basic domain
signature (PDOC00036)
Length = 227
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRIKI 175
SA+ SR RK+ ++D L+D + EN+ L R++I
Sbjct: 140 SAKRSRMRKQRHIDNLKDEANRLGLENRELANRLRI 175
>At3g54620.1 68416.m06043 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 403
Score = 32.3 bits (70), Expect = 0.51
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SA+ SR+RK+E ++ + +V Q AE+ TLI R+
Sbjct: 242 SARRSRRRKQEQMNEFDTQVGQLRAEHSTLINRL 275
>At5g24800.1 68418.m02928 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H2
GI:10954096
Length = 277
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SA+ SR+RK+EY+ LE +V +N TL +++
Sbjct: 133 SAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQL 166
>At4g37730.1 68417.m05342 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 305
Score = 31.5 bits (68), Expect = 0.89
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRIKI 175
SA+ SR RK+ ++D L ++V + EN+ L R+++
Sbjct: 208 SAKRSRMRKQSHIDNLREQVNRLDLENRELGNRLRL 243
>At3g17609.2 68416.m02248 bZIP transcription factor family protein /
HY5-like protein (HYH) nearly identical to HY5-like
protein [Arabidopsis thaliana] GI:18042111; similar to
TGACG-motif binding factor GI:2934884 from [Glycine
max]; contains Pfam profile: PF00170 bZIP transcription
factor
Length = 149
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SAQ +R+RKK YV LE R + N L +I
Sbjct: 91 SAQQARERKKVYVSDLESRANELQNNNDQLEEKI 124
>At3g17609.1 68416.m02247 bZIP transcription factor family protein /
HY5-like protein (HYH) nearly identical to HY5-like
protein [Arabidopsis thaliana] GI:18042111; similar to
TGACG-motif binding factor GI:2934884 from [Glycine
max]; contains Pfam profile: PF00170 bZIP transcription
factor
Length = 135
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SAQ +R+RKK YV LE R + N L +I
Sbjct: 77 SAQQARERKKVYVSDLESRANELQNNNDQLEEKI 110
>At3g56660.1 68416.m06301 bZIP transcription factor family protein
similar to AtbZIP transcription factor GI:17065880 from
[Arabidopsis thaliana]; contains Pfam profile: PF00170
bZIP transcription factor
Length = 620
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 140 SAQDSRKRKKEYVDGLEDRVK 160
SA SR+RKK YV+ LED+VK
Sbjct: 185 SAHLSRQRKKHYVEELEDKVK 205
>At2g40950.1 68415.m05056 bZIP transcription factor family protein
similar to AtbZIP transcription factor GI:17065880 from
[Arabidopsis thaliana]; contains Pfam profile: bZIP
transcription factor PF00170
Length = 721
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 140 SAQDSRKRKKEYVDGLEDRVK 160
SAQ SR+RKK YV+ LE++V+
Sbjct: 241 SAQLSRQRKKHYVEELEEKVR 261
>At5g28770.2 68418.m03535 bZIP transcription factor family protein
similar to seed storage protein opaque-2(bZIP
family)GI:168428 from Zea mays; contains Pfam profile
PF00170: bZIP transcription factor; identical to cDNA
bZIP protein BZO2H3 GI:10954098
Length = 314
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIR 171
SA+ SR+RK+ ++ LE +V Q EN L++
Sbjct: 164 SARRSRRRKQAHLSELETQVSQLRVENSKLMK 195
>At5g28770.1 68418.m03534 bZIP transcription factor family protein
similar to seed storage protein opaque-2(bZIP
family)GI:168428 from Zea mays; contains Pfam profile
PF00170: bZIP transcription factor; identical to cDNA
bZIP protein BZO2H3 GI:10954098
Length = 307
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIR 171
SA+ SR+RK+ ++ LE +V Q EN L++
Sbjct: 157 SARRSRRRKQAHLSELETQVSQLRVENSKLMK 188
>At5g08010.1 68418.m00932 expressed protein condensin subunit SMC4,
Drosophila melanogaster, EMBL:AF186472
Length = 566
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 260 KKLEFDYEDGRDYLTPVVKEENYGSYKIEAKIKPDLTEDFLTNTLLSTGRKLGELFDIMP 319
K+LE D DG E + KIEA+++ +L + + KL ++F++ P
Sbjct: 251 KELEDDIHDGEKQCDEKTAENSESISKIEAELEAELERLEINMISSNIETKLSDVFELEP 310
Query: 320 PIPVK 324
V+
Sbjct: 311 DFEVE 315
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 29.1 bits (62), Expect = 4.7
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Query: 143 DSRKRKKEYVDGLEDRVKQCTA-ENQTLIRRIKIXXXXXXXXXXXXKRLQNVLKEMTLDE 201
+S + +KE + +E +KQ A EN+ K K + LK+ + E
Sbjct: 51 ESERMRKE-TELIETSLKQLEARENELREVEAKRKFFDLKEKELEEKEKELELKQRQVQE 109
Query: 202 TVIDDGEFNMDELITFNRPHSDHDYQVVKSLDTHKVLPNGYVDLPIDEDWPP 253
I DG E +T R H+D D K D+ VL + DED P
Sbjct: 110 RSIQDGPSVDAEPLTQQRNHNDED----KEKDSASVLSASVQIIENDEDHEP 157
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SA+ SR+RK+E LE +V E+ +L++++
Sbjct: 234 SARRSRRRKQEQTSDLETQVNDLKGEHSSLLKQL 267
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRI 173
SA+ SR+RK+E LE +V E+ +L++++
Sbjct: 228 SARRSRRRKQEQTSDLETQVNDLKGEHSSLLKQL 261
>At2g18160.1 68415.m02113 bZIP transcription factor family protein
contains a bZIP transcription factor basic domain
signature (PDOC00036)
Length = 171
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/36 (30%), Positives = 24/36 (66%)
Query: 140 SAQDSRKRKKEYVDGLEDRVKQCTAENQTLIRRIKI 175
SA+ SR RK+++VD L ++ Q + +N+ ++ + +
Sbjct: 42 SARRSRMRKQKHVDDLTAQINQLSNDNRQILNSLTV 77
>At2g18220.1 68415.m02123 expressed protein contains Pfam domain
PF03715: Uncharacterised protein family (UPF0120)
Length = 779
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
Query: 294 DLTEDFLTNTLLSTGRKLGELFDIMPPIPVKNEDIVIEEVSDHETRNTTEVR 345
D+ EDF+ LS+ + +LFDI K+ED ++E++D ET+ + + +
Sbjct: 713 DVVEDFV----LSSDEEEEDLFDIGGD---KDEDDAVDEIADPETKTSKKTK 757
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.133 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,575,076
Number of Sequences: 28952
Number of extensions: 302852
Number of successful extensions: 683
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 668
Number of HSP's gapped (non-prelim): 18
length of query: 356
length of database: 12,070,560
effective HSP length: 82
effective length of query: 274
effective length of database: 9,696,496
effective search space: 2656839904
effective search space used: 2656839904
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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