GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001459-TA|BGIBMGA001459-PA|undefined
         (51 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24310 Cluster: Polyprotein; n=1; Drosophila melanogast...    42   0.003
UniRef50_A6RNP7 Cluster: Predicted protein; n=1; Botryotinia fuc...    30   7.7  

>UniRef50_Q24310 Cluster: Polyprotein; n=1; Drosophila
           melanogaster|Rep: Polyprotein - Drosophila melanogaster
           (Fruit fly)
          Length = 1053

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 20/40 (50%), Positives = 26/40 (65%)

Query: 7   EEIVTSYVLAHVAQFDCRLHHMAFTNGNTTRNKLLQEIKA 46
           EEI  + VLAH+A  D RL  + FT+   TR+KL  E+KA
Sbjct: 144 EEIAVTTVLAHMANIDSRLQRVLFTSNVRTRSKLQAELKA 183


>UniRef50_A6RNP7 Cluster: Predicted protein; n=1; Botryotinia
          fuckeliana B05.10|Rep: Predicted protein - Botryotinia
          fuckeliana B05.10
          Length = 245

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 2  EDLSHEEIVTSYVLAHVAQFDCRLHHMAFTNGNTTR--NKLL 41
          + L HEE++  +++ H   F+   H  +F   N     NKLL
Sbjct: 28 KSLGHEEVIEQHIIQHSTSFEITQHSTSFERQNVINWYNKLL 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.319    0.128    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,096,711
Number of Sequences: 1657284
Number of extensions: 1303928
Number of successful extensions: 2320
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2319
Number of HSP's gapped (non-prelim): 2
length of query: 51
length of database: 575,637,011
effective HSP length: 32
effective length of query: 19
effective length of database: 522,603,923
effective search space: 9929474537
effective search space used: 9929474537
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)