GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001458-TA|BGIBMGA001458-PA|IPR002290|Serine/threonine
protein kinase, IPR000719|Protein kinase, IPR008271|Serine/threonine
protein kinase, active site, IPR011009|Protein kinase-like
         (403 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    91   2e-20
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    65   1e-12
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                63   4e-12
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    59   8e-11
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    58   2e-10
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    58   2e-10
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    56   7e-10
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.5  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    23   6.1  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   6.1  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 90.6 bits (215), Expect = 2e-20
 Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 6/225 (2%)

Query: 80  EKIGELSDDDFEKLGELGQGNGGVV--MKVRHKSTGLIMARKLIHLEVKPAIKKQ-IIRE 136
           E+  +L   D   L  LG G  G V  +++   S+     +++   ++    ++Q I+ E
Sbjct: 357 EEFRDLRLQDLRPLATLGVGGFGRVELVQIAGDSSRSFALKQMKKAQIVETRQQQHIMSE 416

Query: 137 LKVLHECNFAHIVGFYGAFYSDGEISICMEYMDGGSLDLILKKAGRIPESILGTITSAVL 196
            +++ E +   +V  +  F     + + ME   GG L  +L+  G   +      T+ V+
Sbjct: 417 KRIMGEADCDFVVKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVV 476

Query: 197 KGLSYLRDKHAIMHRDVKPSNILVNSNGEIKICDFGVSGQLIDSMAN-SFVGTRSYMSPE 255
           +   YL  ++ I++RD+KP N+L++S G +K+ DFG + +L       +F GT  Y++PE
Sbjct: 477 EAFDYLHSRN-IIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPE 535

Query: 256 RLQGTHYSVQSDIWSLGLSLVEMAIGMYPIPPPD-AKTLAAIFGG 299
            +    + + +D WSLG+ + E+  G  P    D  KT   I  G
Sbjct: 536 VILNKGHDISADYWSLGVLMFELLTGTPPFTGGDPMKTYNIILKG 580


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 64.9 bits (151), Expect = 1e-12
 Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 10/199 (5%)

Query: 94  GELGQGNGGVVMKVRHKSTGLIMARKLIHLEVKPAIKKQIIRELKVLHECNFAHIVGFYG 153
           GE G    G +       T + +A K +        +   + E  ++ +    +++   G
Sbjct: 642 GEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSADKARNDFLTEASIMGQFEHPNVIFLQG 701

Query: 154 AFYSDGEISICMEYMDGGSLDLILK-KAGRIPESILGTITSAVLKGLSYLRDKHAIMHRD 212
                  + I  E+M+ GSLD  L+   G+     L  +   +  G+ YL + + + HRD
Sbjct: 702 VVTKSNPVMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGMQYLAEMNYV-HRD 760

Query: 213 VKPSNILVNSNGEIKICDFGVSGQLIDSMANSFVGTRS------YMSPERLQGTHYSVQS 266
           +   N+LVN+    KI DFG+S + I+S       TR       + +PE +    ++  S
Sbjct: 761 LAARNVLVNAALVCKIADFGLSRE-IESATEGAYTTRGGKIPVRWTAPEAIAFRKFTSAS 819

Query: 267 DIWSLGLSLVE-MAIGMYP 284
           D+WS+G+   E M+ G  P
Sbjct: 820 DVWSMGIVCWEVMSYGERP 838


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 63.3 bits (147), Expect = 4e-12
 Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 12/191 (6%)

Query: 96  LGQGNGGVVMKVRHKSTGLIMARKLIHLEVKPAIKKQIIRELKVLHECNFAHIVGF-YGA 154
           LG G  G+V K  +K  G  +A K+I  E K +      +    L   N   ++    GA
Sbjct: 73  LGSGGFGIVYKALYK--GEQVAAKIIQTE-KYSNMLNSEKHASFLKHSNIVKVLMIEQGA 129

Query: 155 FYSDGEISICMEYMDGGSLDLILKKAGRIPESILGTITSAVLKGLSYLRDKHAIMHRDVK 214
             S   + +C   +     + IL K  RI   IL +IT A    L +  +   I+H DVK
Sbjct: 130 SLSLITMELCGTTLQNRLDEAILIKNERI--CILKSITCA----LQFCHNA-GIVHADVK 182

Query: 215 PSNILVNSNGEIKICDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSLGL 273
           P NIL++ NG+ K+ DFG S  +   +  + F GT  Y +PE ++    +  +DI+SLG+
Sbjct: 183 PKNILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGTPGYTAPEVIKQNRPTPAADIYSLGI 242

Query: 274 SLVEMAIGMYP 284
              +M     P
Sbjct: 243 VAWQMLFRKLP 253


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 58.8 bits (136), Expect = 8e-11
 Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 3/103 (2%)

Query: 148 IVGFYGAFYSDGEISICMEYMDGGSLDLILKKAGRIPESILGTITSAVLKGLSYLRDKHA 207
           +V  +  F +   +   MEY++GG L   +++ G+  E +     S +  GL +L  +  
Sbjct: 47  LVQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGR-G 105

Query: 208 IMHRDVKPSNILVNSNGEIKICDFGVSGQLI--DSMANSFVGT 248
           I++RD+K  N+L++ +G IKI DFG+  + I  D    +F GT
Sbjct: 106 IVYRDLKLDNVLLDQDGHIKIADFGMCKEGISGDKTTKTFCGT 148


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 57.6 bits (133), Expect = 2e-10
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 195 VLKGLSYLRDKHAIMHRDVKPSNILVNSNGEIKICDFGVSGQLIDSMANSFVGTRSYMSP 254
           VL+G+ YL  +  ++HRDVK  N+L++     K+ DFG     +  M  S VGT  +M+P
Sbjct: 706 VLEGIRYLHSQ-GLVHRDVKLKNVLLDIENRAKLTDFGFCITEV-MMLGSIVGTPVHMAP 763

Query: 255 ERLQGTHYSVQSDIWSLGLSLVEMAIGMYPIP 286
           E L G HY    D+++ G+    +  G   +P
Sbjct: 764 ELLSG-HYDSSVDVYAFGILFWYLCAGHVRLP 794


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 57.6 bits (133), Expect = 2e-10
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 195 VLKGLSYLRDKHAIMHRDVKPSNILVNSNGEIKICDFGVSGQLIDSMANSFVGTRSYMSP 254
           VL+G+ YL  +  ++HRDVK  N+L++     K+ DFG     +  M  S VGT  +M+P
Sbjct: 744 VLEGIRYLHSQ-GLVHRDVKLKNVLLDIENRAKLTDFGFCITEV-MMLGSIVGTPVHMAP 801

Query: 255 ERLQGTHYSVQSDIWSLGLSLVEMAIGMYPIP 286
           E L G HY    D+++ G+    +  G   +P
Sbjct: 802 ELLSG-HYDSSVDVYAFGILFWYLCAGHVRLP 832


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 55.6 bits (128), Expect = 7e-10
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 6/107 (5%)

Query: 206 HAIMHRDVKPSNILVNSNGE---IKICDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGT 260
           + ++HRD+KP N+L+ S  +   +K+ DFG++ ++         F GT  Y+SPE L+  
Sbjct: 28  NGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAGTPGYLSPEVLKKE 87

Query: 261 HYSVQSDIWSLGLSLVEMAIGMYPIPPPDAKTL-AAIFGGQNEDHSP 306
            Y    DIW+ G+ L  + +G  P    D   L A I  G  +  SP
Sbjct: 88  PYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYDYPSP 134


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 87  DDDFEKLGELGQGNGGVVMKVRHKSTGLIMARKLIHLEVKPAIK-KQIIRELKVLHECNF 145
           D+D  ++  LG+ +GG   +   + T L+M  +    E    +  K +   + VL   + 
Sbjct: 22  DNDRSRIARLGRDDGGKSRQSSFEVTSLLMREETEDAEDTQTLNLKHLRAAVLVLTNPSN 81

Query: 146 AHIVGFYGAFYSDGEIS 162
             +    GA  S GE S
Sbjct: 82  EVVAVALGALLSKGEES 98


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 8/26 (30%), Positives = 16/26 (61%), Gaps = 1/26 (3%)

Query: 121 IHLEVKPAIKKQIIREL-KVLHECNF 145
           +H +V P  +K ++RE+ K + +  F
Sbjct: 496 VHEDVSPTFEKPLVREIEKTIDDARF 521


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 309 APNSPRPMAIFELLDYIVNEPPPKLPSGIFSDEFKDFVDRCLKKNPDERADLKTLMNH-E 367
           +P   +P+   + L  +  EPP ++ +G    +F+    +CL+ +  +  ++KTL +   
Sbjct: 17  SPLPRKPVNPVQELKALFAEPPVRVSNGGKEQDFRFEAIQCLQSSAFK--EIKTLPDRGM 74

Query: 368 WIRKAE 373
           W  K E
Sbjct: 75  WSSKIE 80


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.134    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,660
Number of Sequences: 429
Number of extensions: 5338
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 11
length of query: 403
length of database: 140,377
effective HSP length: 59
effective length of query: 344
effective length of database: 115,066
effective search space: 39582704
effective search space used: 39582704
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)