Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001457-TA|BGIBMGA001457-PA|undefined
(636 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 37 0.010
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 36 0.017
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 33 0.16
SPAC8C9.10c |||ribosome biogenesis protein Rrp14-N|Schizosacchar... 32 0.21
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 32 0.21
SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces pombe... 31 0.37
SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces... 31 0.65
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 31 0.65
SPBP4H10.05c |spe2||S-adenosylmethionine decarboxylase proenzyme... 31 0.65
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 30 0.85
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 30 1.1
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 29 1.5
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 29 1.5
SPBC106.05c |tim11||F0-ATPase subunit E|Schizosaccharomyces pomb... 29 1.5
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 29 1.5
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 29 1.5
SPBC1711.11 |||autophagy associated protein |Schizosaccharomyces... 29 2.0
SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|... 29 2.0
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 29 2.0
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 29 2.0
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 29 2.0
SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr ... 29 2.6
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 29 2.6
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 2.6
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 28 3.4
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 28 3.4
SPAC664.08c |||traub transciption factor family protein |Schizos... 28 3.4
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 28 3.4
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 28 4.5
SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp... 28 4.5
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 28 4.5
SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr... 28 4.5
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 28 4.5
SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 4.5
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 28 4.5
SPAC1783.07c |pap1|caf3, caf3|transcription factor Caf3|Schizosa... 27 6.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 6.0
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 27 6.0
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 7.9
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 27 7.9
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 27 7.9
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 27 7.9
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 36.7 bits (81), Expect = 0.010
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 115 IKKKNSTDLPKNDQN---DTDEKSDEDKMNVDEPVDSPEKNVDMTILSNSTSRVTDNEIV 171
+K K + + ND++ D+ E D+ + + D K D + + + E
Sbjct: 458 VKAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEKTDSKETA 517
Query: 172 ILEDSSDQFDTKMKLEADIEPKANGRKSPRESKSNKIEQIEKSAEYQ 218
+ +D DT K D +AN + +SK K E+IE++A+ Q
Sbjct: 518 DKVEQTDSKDTNEKPAKDDNKEANEKAEKVDSKDVK-EKIEEAADLQ 563
Score = 31.5 bits (68), Expect = 0.37
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 104 KQKLNSAKRKQIKKKNSTDLPKNDQNDTDEK-SDEDKMNVDEPVDSPEKNVDMTILSNST 162
++K + + K+ K +N+ D + D K ++ED + V + E + +I +N
Sbjct: 415 EEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETD---SIEANDK 471
Query: 163 SRVTDN---EIVILEDSSDQFDTKMKLEADIEPKANGRKSPRESKSNKIEQIEKSAEYQK 219
TD+ E + E S + D K K IE K+ + ++K+EQ + +K
Sbjct: 472 DEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEKTDSKETADKVEQTDSKDTNEK 531
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 35.9 bits (79), Expect = 0.017
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 15/128 (11%)
Query: 108 NSAKRKQIKKKNSTDLPKND-QNDTDE------KSDEDKMNVDEPVDSPEKNVDMTIL-- 158
NS + ++ D P ND + D E ++DED + D+ VDS KN +++I
Sbjct: 80 NSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRR 139
Query: 159 ---SNSTSRVTDNEIVILEDSSDQFDTKMKLEADIEPKANGRKSP---RESKSNKIEQIE 212
SNS V + ++ SD D +L ++E RK +E K+ +EQ +
Sbjct: 140 KTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQERKREQMLQEEKNRALEQEK 199
Query: 213 KSAEYQKG 220
+ E G
Sbjct: 200 REREIAFG 207
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 449 IDGSAVGSDDEQDGDEYEVDNEVFVPHGYLSDEEATMEDDDVLSLSPETQKARLKHLEDE 508
I+G S D++ ++ EVD + + +DE+A+ DD V S S + + +K + E
Sbjct: 84 IEGFTSPSTDDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDS-SNKNSEVSIKRRKTE 142
Query: 509 FETE 512
++
Sbjct: 143 SNSQ 146
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 32.7 bits (71), Expect = 0.16
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 99 VAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTD-EKSD--EDKMNVDEPVDSPEK 151
V+ KK K K+KQ KKK T D +D EK + E N+D+ +D EK
Sbjct: 90 VSTNKKAKNKKKKKKQQKKKKVTGKRDLDNQSSDNEKLEGLESSKNIDDDIDEIEK 145
>SPAC8C9.10c |||ribosome biogenesis protein
Rrp14-N|Schizosaccharomyces pombe|chr 1|||Manual
Length = 154
Score = 32.3 bits (70), Expect = 0.21
Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 101 WKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSD--EDKMNVDEPVDSPEKNVDMTIL 158
WK+K+ K+++ K K S D ND +D +KS E + + D +++ + +
Sbjct: 36 WKQKKSTLEEKKERRKMKFSLDGLVNDADDDSQKSSKWEQSSTMSDDTDVSDRHAES--M 93
Query: 159 SNSTSRVTDNEIVILEDSSDQFDTKMKLEADIEPKANGRKSPRESKSNKIEQIEKSAEYQ 218
S ++ ++I L + D K + + P N + S + S +K+++ + A +
Sbjct: 94 SQIRGKLA-SKIQDLREKRKAGDLNQKRQ-NKRPVENEKDSQKGSGKSKVQKKKHKASPR 151
Query: 219 KG 220
G
Sbjct: 152 AG 153
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 32.3 bits (70), Expect = 0.21
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 102 KKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSNS 161
+K+ ++ +A+ + + +K T + +N +EKS K E + +KN N
Sbjct: 1587 EKETEILAARSELVAEKEKTK--EELENQLNEKSQRIK----ELEEQAQKNSSENTHDNI 1640
Query: 162 TSRVTDNEIVILEDSSDQFDTKM-KLEADIEPKANGRKSPRESKS----NKIEQIEKSAE 216
+ L+++S FD K+ K+ A+ E ++ + S E K+ NKI Q+E++ E
Sbjct: 1641 DDMIKQQVEEKLKENSANFDVKLKKVVAETEFRSKAKISVYEKKTRDLQNKITQLEETIE 1700
>SPCC338.08 |ctp1|mug38|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 104 KQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVD 154
+++L S K KQI S+ + N + D +DED++ + VD + +++
Sbjct: 48 EKELESVKTKQISSSASSKVSSNTIQELDSTTDEDEIPGSDTVDEEDPSLN 98
>SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 578
Score = 30.7 bits (66), Expect = 0.65
Identities = 23/118 (19%), Positives = 48/118 (40%), Gaps = 9/118 (7%)
Query: 457 DDEQDGDEYEVDNEVFVPHGYLSDEEATMEDDDVLSLSPETQKARLKHLEDEFET----- 511
DD + E + + +G +EEA M ++++ ++ L+D E
Sbjct: 364 DDATLVKQQEAETDALFDNG--EEEEALMSEEEINGAKFAAVDKQISMLQDTLEAMKAKK 421
Query: 512 --EMKKPTEKLKPRMYGPLWESSDGGKPSKCVDALWNYFSKLAMVIDDPTPFLQPSSE 567
M+KP + + YGP+ + +C S +A ++ + P+L+ + E
Sbjct: 422 MNRMRKPRRRDLTKEYGPITYAMQNELAERCNYLSAEQLSNVAEILREEMPWLRDTDE 479
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 30.7 bits (66), Expect = 0.65
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 8/175 (4%)
Query: 48 NSDT-ETVTKIGKISKENDVQELVIIXXXXXXXXXXXXXXXXIVNPYVKLVDVAWKKKQK 106
NSD E +G EN++ +L + I P++ D A K+
Sbjct: 118 NSDKLENEGSVGSSIDENELVDLDTLLDNDQPEKNESNTASTIRPPWIGNNDHATDKENL 177
Query: 107 LNS-AKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVD----EPVDSPEKNVDMTILSNS 161
L S A + TD N N++D +S+ + + D E DS N+ I+S +
Sbjct: 178 LESDASSSNDSESELTDSADN-MNESDSESEIESSDSDHDDGENSDSKLDNLRNYIVSLN 236
Query: 162 TSRVTDNEIVILEDSSDQFDTKMKLEADIEPKANGRKSPRESKSNKIEQIEKSAE 216
R D SSD D+ ++ + K + ++ +ES+ N I EK+ +
Sbjct: 237 QKRKKDEADAESVLSSDDNDSIEEISIK-KVKYDPHETNKESEYNLIGSSEKTID 290
>SPBP4H10.05c |spe2||S-adenosylmethionine decarboxylase proenzyme
Spe2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 30.7 bits (66), Expect = 0.65
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 355 WPL-SDKDDDVMIIEDELPPIDAEDEIVACDQAPREKLR 392
W L SD DD ++ED L P D E++ D +P L+
Sbjct: 173 WHLFSDLADDYSLLEDSLDPEDETLEVLMTDMSPERSLQ 211
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 30.3 bits (65), Expect = 0.85
Identities = 24/112 (21%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 104 KQKLNSAKRKQIKKKNSTDLPKNDQNDTDE-KSDEDKMNVDEPVDSPEKNVDMTILSNST 162
K+K + + +++K+K L KND+ +E DED +E + ++N + S
Sbjct: 7 KRKKHQSGNEEVKEKRQKPL-KNDKKIAEELPQDEDDYEQEEENEDADQNTSVESESEEL 65
Query: 163 SRVTDNEIVILEDSSDQFDTK-MKLEADIEPKANGRKSPRESKSNKIEQIEK 213
++E V + + T ++ +D++ N +K+ +E + +I+K
Sbjct: 66 DNENEDERVQKSVNLNASSTSDIEKFSDLQLSENIQKAIKEMGFETMTEIQK 117
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/67 (22%), Positives = 35/67 (52%)
Query: 104 KQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSNSTS 163
K K K+++++ D ++ +D D + E++M+ + +DS + V + + S S
Sbjct: 676 KPKRKKHKKQRLEAGEEFDSEDDNSDDMDIEESEEEMDTNMVIDSGSRRVTRSQNATSQS 735
Query: 164 RVTDNEI 170
+ + +EI
Sbjct: 736 QESGSEI 742
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 29.5 bits (63), Expect = 1.5
Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 116 KKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSNSTSRVTDNEIVILED 175
K+K + +LP N ++ +K E +N + S + ++ I S + + N +L+
Sbjct: 47 KQKQNLNLP-NSYTNSSQKVRESTVNSQASLSSNDLRTELLIKSGENAILRAN---LLKQ 102
Query: 176 SSDQFDTKMKLEADIEPKANGRKSPRESKSNKIEQIEKSAEYQK 219
S A +E N K ++ K+E+++K EY K
Sbjct: 103 SEAN-------NAALESLNNSIKQKQDEYQRKLEELKKEIEYAK 139
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 29.5 bits (63), Expect = 1.5
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 103 KKQKLNSAKRKQIKKKNST-DLPKNDQN-DTDEKSDEDKMNVDEPVDSPEKNVDMTILSN 160
KK L+ +K+ +T D+ K+ + ++ EKS++D + + PEK + S
Sbjct: 45 KKNLLDLLSQKEFLPYLTTEDVGKHKKTKESLEKSNDDSQKISKKGAPPEKAHSSSEASG 104
Query: 161 STSRVTDNEIVILE-DSSDQFDTKMKLEADIEPKANGRKSPRESKSNKIEQIEKSAE 216
S S +++ E +SS + + +D E +++ S S S+ E E S+E
Sbjct: 105 SGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSES-ESSSE 160
>SPBC106.05c |tim11||F0-ATPase subunit E|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 96
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 95 KLVDVAWKKKQKL-NSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNV 153
K +D + +++ L SAK + KN+ PK D + K D + ++DE V EKNV
Sbjct: 39 KEIDENYHRQESLIESAKIAYLNTKNTP--PKEDSMLPNLKKDSEDFDMDEFVKELEKNV 96
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 102 KKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPE 150
KK +K+ K+K+ KKK+ K ++ + +K ++ K + + D PE
Sbjct: 190 KKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKKKKKI-KLKDKPE 237
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 98 DVAWKKKQKLNSAKRKQIKKKNSTDL---PKNDQNDTDEKSDEDKMNVDEPVDSPEKN 152
D A ++K+K +S+K+K KKK ST PK + T +K E K E K+
Sbjct: 161 DEAKREKRKKHSSKKKS-KKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKS 217
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 151 KNVDMTILSNSTSRVTDNEIVILEDSSDQFDTKMKLEADIEPKANGR--KSPRESKSNKI 208
KN + IL N TS D+ I +++ T + + K NGR ++P E ++ K
Sbjct: 432 KNQNDQILPNETSESDDDANSISSMENEEERTSDSKSSAKQGKGNGRAKETPEEKRARKK 491
Query: 209 EQIEKSAEYQK 219
+ E AE +K
Sbjct: 492 KTKEDKAEKRK 502
>SPBC1711.11 |||autophagy associated protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 390
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 113 KQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSNSTSRVTDNEIVI 172
KQ+ + TDL K ++ + D PV S ++ ++S R+ N I +
Sbjct: 165 KQLLQNADTDLSKLEKTCVQYMNSVQNFPTDIPVPSNLSISNLDVVSVEFKRLKRNSIFL 224
Query: 173 LEDSSDQFDTKMKLEADIEPKANGRKSPRESKSNKIEQIE 212
+ + T ++ D+E KS +S+ K++Q E
Sbjct: 225 INSFHSKVITSIQ---DLEDYMVVFKSLIKSREQKVKQFE 261
>SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 260
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 8/49 (16%)
Query: 101 WKK-KQKLNSAKRKQIKKKNSTDLP-------KNDQNDTDEKSDEDKMN 141
W+K K+KL+SAK +++KK+S + KN++N+ D+ +MN
Sbjct: 6 WEKLKKKLDSAKSGRVEKKHSNEKKYLKSVKGKNNENENSYIVDKKRMN 54
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 95 KLVDVAWKKKQKLNSAKRKQI----KKKNSTDLPKNDQNDT-----DEKSDEDKMNVDEP 145
++VD + K + N +R+Q KK D+ + N+T D++ D D+ +E
Sbjct: 316 RMVDFCFSKFMEKNQQRREQQDKGENKKRQDDVDQATDNNTNTILEDDEKDNDEEEEEEI 375
Query: 146 VDSPEKNV 153
V++ EKN+
Sbjct: 376 VNAREKNL 383
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 29.1 bits (62), Expect = 2.0
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Query: 298 FTLKLDMRLAPTTRAELSDDKRHQLDNFIKEQKCKEHELYLKCLKDGNSKPLSTGKTWPL 357
F +K M L+ SD ++ + K K ++++ D S S G +
Sbjct: 211 FFIKHQMSLSKYPSPNESDSFLDEVLSTSKSYPLKLNDIFTP--SDAVSSANSLGVSNRN 268
Query: 358 SDKDDDVMIIEDELPPIDAEDEIVACDQAPREKLRPKLLSFHENRRPPYWGTWRK 412
S+ + ++ + P + EI++C ++ K + F+++ RPPY+G++ K
Sbjct: 269 SENEVRQLMSAYQDPSVSKPQEILSC----LSQIPIKFIFFYQDVRPPYFGSYTK 319
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 95 KLVDVAWKKKQKLNSAKRKQI----KKKNSTDLPKNDQNDT-----DEKSDEDKMNVDEP 145
++VD + K + N +R+Q KK D+ + N+T D++ D D+ +E
Sbjct: 316 RMVDFCFSKFMEKNQQRREQQDKGENKKRQDDVDQATDNNTNTILEDDEKDNDEEEEEEI 375
Query: 146 VDSPEKNV 153
V++ EKN+
Sbjct: 376 VNAREKNL 383
>SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 240
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 122 DLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSNSTSRVTDNEIVILEDSSDQFD 181
D +ND D D +++ D + S N + LS S + D++ VI ED +
Sbjct: 158 DEAENDDMDNDLEANADAFDESNLEASLSPNAE---LSPRKSHI-DHDFVIPEDEMLSEE 213
Query: 182 TKMKLEADIEPKANGRKSPRES 203
+ ++E I PK +SPR++
Sbjct: 214 EEQEVEKQILPKFVVPESPRKT 235
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 132 DEKSDEDKMNVDEPVDSPEKNVDM-TILSNSTSRVTDNEIVILEDSSD---QFDTK-MKL 186
DE+SDE++ + ++ D +++ + T +NS + V D + LE + Q +T+
Sbjct: 238 DERSDEEESDNEQVNDEKKQSSEEDTTENNSAAEVIDETVNDLESAVSKGLQIETQPASH 297
Query: 187 EADIEPKANGRKSPRESKSNKIEQIEKSAE 216
+ +++ + + + S S+ IE + S E
Sbjct: 298 DGEVDGEVKEEEENKVSSSSNIEASQSSLE 327
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.7 bits (61), Expect = 2.6
Identities = 32/187 (17%), Positives = 65/187 (34%), Gaps = 11/187 (5%)
Query: 14 PSKKKLKQARLPFKLI-----SDIXXXXXXXXXXXXXLSNSDTETVTKIGKISKENDVQE 68
PSKK +K+ + K S+ +S +E+ + + S +E
Sbjct: 66 PSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEE 125
Query: 69 LVIIXXXXXXXXXXXXXXXXIVNPYVKLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQ 128
+++ +V + KK+ +S+ + S +
Sbjct: 126 VIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESE 185
Query: 129 NDTD--EKSDEDKMNVDEPVDSPEKNVDMTILSNSTSRVTDNEIVILEDSSDQFDTKMKL 186
+ + EK++E K E E + D + S + +D+E +SS + + K K
Sbjct: 186 EEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSE----SESSSEDEKKRKA 241
Query: 187 EADIEPK 193
E E +
Sbjct: 242 EPASEER 248
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 137 EDKMNVDEPVDSPEKNVDMTILSNSTSRVTDNEIVILEDSSDQFDTKMKLEADIE 191
ED ++ EP+ SP + +T R+ +NE + E S D+ + ++EA+ E
Sbjct: 174 EDPPDLVEPLRSPSPTPEQL----ATVRIGENEQIESETSEDKLQREKEMEAEAE 224
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 113 KQIKKKNSTDLPKNDQNDTDEKSDEDKM-NVDEPVDSPEKNVDMTILSNSTSRVTDNEIV 171
KQ K ++ N ++ D +D D NV++ SPE+ + + ++ + + + +
Sbjct: 36 KQEKSDSTLSSSSNHDSNHDTPADVDNSSNVNKNSSSPERELPTSPSHHANTEIDSSSSM 95
Query: 172 ILEDSSDQFDTKM 184
+ SSD F + +
Sbjct: 96 LPPPSSDPFSSPL 108
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 28.3 bits (60), Expect = 3.4
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 448 SIDGSAVGSDDEQDGDEYEVDNEVFVPHGYLSDEEATM-----EDDDVLSLSPETQKARL 502
S++ + +E+D +E E D V H S EA+ EDDD S PE RL
Sbjct: 84 SLNSQSSSPSEEEDSEEDEND-AVSEDHENFSSSEASSISEENEDDDQSSAIPEKDMDRL 142
Query: 503 KHL 505
K +
Sbjct: 143 KKI 145
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 28.3 bits (60), Expect = 3.4
Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 98 DVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTI 157
+VA + K+ + + K+ K++ + D D + +E E D + D+++
Sbjct: 393 EVAAVEAAKIRADEEKKKKEREEQVRLLQESADKDAEMNEASTATSENEDLKD---DLSL 449
Query: 158 LSNSTSRVTDNEIVILEDSSDQFDTKMKLEADIEPKANGRKSPRESKSNKIEQIEKS 214
S+ + +++ E+++ K+K E+ + KA KS + S+ + EK+
Sbjct: 450 ADLSSKKTANSQAT--ENNNTPSKAKVKAESKVRSKAKSDKSRAKLSSDTNKDSEKN 504
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 328 EQKCKEHELYLKCLKDGNSKPLSTGKTWPLSDKDDDVMIIEDELPPIDAEDEIVACDQAP 387
E K KE+E +L C+ + S+ T + K D MI+ + D ++ + +
Sbjct: 691 ETKLKEYEQHLSCVNISKKQVSSSSDTSFGNTKMDSSMILSNSEAVSDEQERELIESEKH 750
Query: 388 REKLRPKLLSFHEN 401
R KL + L N
Sbjct: 751 RMKLESENLHLQAN 764
>SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit
Alp13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 103 KKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTI---LS 159
K QK S +Q+K+ +TD KN++ E +++D + P+ + +V + L
Sbjct: 125 KTQKSESPIPQQVKRDGTTD-AKNEETTKPENNEKDDFEEEPPLPKHKISVPDVLKLWLV 183
Query: 160 NSTSRVTDNEIVI 172
+ +T N+ +I
Sbjct: 184 DDWENITKNQQLI 196
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 118 KNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSNSTSRVTDNEIVILEDSS 177
K TD+ + + DE +E + ++P+ S E+N ++ +++S D+ + ED +
Sbjct: 753 KAMTDMGSDSEQSADENDNESMASEEKPMFSDEEN--LSEIAHSEDEF-DDTVDFFEDEN 809
Query: 178 D 178
D
Sbjct: 810 D 810
>SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 119 NSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSNSTSRVTDN 168
NS + K+++N+ D +D D NV+ + D+ + SN + TDN
Sbjct: 199 NSKGVEKSEENE-DGVTDNDSSNVNSSTNESPNPTDINVCSNDDA--TDN 245
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 126 NDQNDTDEKSDEDKMNVDEPVDSPE-KNVDMTILSNSTSRVTDNEIVILEDSSDQFD 181
+D D DE+ + +K +E + PE N D T + S + D+E + ++ SD +D
Sbjct: 267 DDDEDEDEELEGEKEEEEEEKEKPEISNYDETEGKVNFS-LEDSESLEFDEGSDDYD 322
>SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 350
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 120 STDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSNSTSRVTDNEI 170
S L + +D E S ED N D P P + ++ L +S+ D E+
Sbjct: 229 SGSLKAVENSDVIESSAEDSSNTDNPSTKPSNEMPISPLLSSSVFFKDTEM 279
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 122 DLPKN-DQNDTDEKSDEDKMNVDEPVDSPEKNVDMTILSNSTSRVTDNE 169
D KN ++N +EK DED VDE S E++V+M + + D E
Sbjct: 31 DQDKNPEENVMNEKEDEDVDAVDE--KSGEEDVEMDTMEDENENDEDTE 77
>SPAC1783.07c |pap1|caf3, caf3|transcription factor
Caf3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 552
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 158 LSNSTSRVTDNEIVILEDSSDQFDTKMKLEADIEPKANGRKSPRESKSNKIEQIEKSAE 216
+S+ +SR T +E V L + D +++ D++PK GRK+ + S+K + ++A+
Sbjct: 37 VSDRSSRRTSSEEVDLMPNVDD-----EVDGDVKPKKIGRKNSDQEPSSKRKAQNRAAQ 90
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 115 IKKKNSTDLPKNDQN-DTDEKSDEDKMNVDEPVDSPEKNVDMTILSNSTSRVTDNEIVIL 173
I++ NS P+N+ + D E D+ D DS +++DM + + +
Sbjct: 4069 IQENNSQPPPENEDHLDLPEDLKLDEKEGDVSKDSDLEDMDMEAADENKEEADAEKDEPM 4128
Query: 174 EDSSDQFDTKMKLEADIE 191
+D D + L+ DI+
Sbjct: 4129 QDFEDPLEENNTLDEDIQ 4146
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 104 KQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVD 154
K+K NS R +NS D N +T+E+ DE M + E NV+
Sbjct: 582 KEKKNSKSRVVGNTENSKDEFNNPLFETEEQIDESWMENWNDEEETENNVE 632
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/62 (27%), Positives = 25/62 (40%)
Query: 159 SNSTSRVTDNEIVILEDSSDQFDTKMKLEADIEPKANGRKSPRESKSNKIEQIEKSAEYQ 218
S+ V D EI S + T PK N K S+S+++ QI E +
Sbjct: 178 SDEEDEVDDEEIESFNSFSRKMQTISNSRYRGSPKPNIEKQSCSSESDRVSQISDDEEDE 237
Query: 219 KG 220
+G
Sbjct: 238 EG 239
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 7.9
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 95 KLVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVDSPEKNVD 154
K V VA K +K++S K KKKN+T + +++D S DK D ++ E + D
Sbjct: 21 KRVKVA-KLPKKVDSFSPK--KKKNTT---SSGSSESDSMSQNDKKK-DSSLNESE-DED 72
Query: 155 MTILSNSTSRVTDNEIVILEDSSDQFDTKMKLEADIEPKANGRKSPRESKSNK 207
S S + E E +D+ + K + E A +K +E K+ K
Sbjct: 73 FAGFGESASENDELESAESEAENDEESSSQKSNSK-ESHAQRKKLQKERKAMK 124
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 457 DDEQDGDEYEVDNEVFVPHGYLSDEEAT--MEDDDVLSLSPETQKARLKHLEDEFETEMK 514
+DE + DEYE + H D +T D S PET++ +EFE ++
Sbjct: 133 EDEWESDEYEEVVDGSASHPIEEDSVSTDFQNHDYEKSSDPETERLNDLREREEFEERLR 192
Query: 515 K 515
+
Sbjct: 193 R 193
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 96 LVDVAWKKKQKLNSAKRKQIKKKNSTDLPKNDQNDTDEKSDEDKMNVDEPVD----SPEK 151
L+DV +++QK + Q+ K+N + + D K E+K+ +E E+
Sbjct: 57 LIDVPKEERQKRKQELKDQLLKENEGSISSKKKKRLD-KYIENKLKKEEVASLIAKLAEE 115
Query: 152 NVDMTILSNS 161
+D ++LS+S
Sbjct: 116 RIDTSLLSSS 125
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.308 0.129 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,634,812
Number of Sequences: 5004
Number of extensions: 112436
Number of successful extensions: 455
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 422
Number of HSP's gapped (non-prelim): 63
length of query: 636
length of database: 2,362,478
effective HSP length: 77
effective length of query: 559
effective length of database: 1,977,170
effective search space: 1105238030
effective search space used: 1105238030
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 57 (27.1 bits)
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