Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001456-TA|BGIBMGA001456-PA|IPR008991|Translation protein
SH3-like
(420 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g33520.1 68414.m04148 KOW domain-containing protein / D111/G-... 42 6e-04
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 38 0.017
At5g12230.1 68418.m01435 expressed protein 37 0.022
At4g25020.1 68417.m03589 KOW domain-containing protein / D111/G-... 37 0.029
At4g26630.1 68417.m03837 expressed protein 36 0.067
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 36 0.067
At4g40020.1 68417.m05666 hypothetical protein 35 0.088
At2g08986.1 68415.m01009 hypothetical protein 35 0.088
At5g53440.1 68418.m06641 expressed protein 35 0.12
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 35 0.12
At2g22795.1 68415.m02704 expressed protein 35 0.12
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 35 0.12
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 34 0.20
At3g42580.1 68416.m04420 Ulp1 protease family protein contains P... 33 0.27
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 33 0.36
At4g37490.1 68417.m05305 G2/mitotic-specific cyclin (CYC1) / B-l... 33 0.36
At3g50670.1 68416.m05542 U1 small nuclear ribonucleoprotein 70 (... 33 0.47
At3g11560.3 68416.m01412 expressed protein 33 0.47
At3g11560.2 68416.m01411 expressed protein 33 0.47
At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing ... 33 0.47
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 33 0.47
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 32 0.62
At3g11860.1 68416.m01454 expressed protein ; expression supporte... 32 0.62
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 32 0.62
At2g04330.1 68415.m00429 hypothetical protein contains Pfam prof... 32 0.62
At1g56660.1 68414.m06516 expressed protein 32 0.62
At5g42820.2 68418.m05216 U2 snRNP auxiliary factor small subunit... 32 0.82
At5g42820.1 68418.m05215 U2 snRNP auxiliary factor small subunit... 32 0.82
At3g57930.1 68416.m06457 expressed protein 32 0.82
At3g26560.1 68416.m03315 ATP-dependent RNA helicase, putative si... 32 0.82
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 32 0.82
At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family p... 31 1.1
At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family p... 31 1.1
At1g11120.1 68414.m01273 expressed protein 31 1.1
At5g55670.1 68418.m06941 RNA recognition motif (RRM)-containing ... 31 1.4
At3g18420.1 68416.m02342 tetratricopeptide repeat (TPR)-containi... 31 1.4
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 31 1.4
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 31 1.4
At5g55840.1 68418.m06958 pentatricopeptide (PPR) repeat-containi... 31 1.9
At3g28770.1 68416.m03591 expressed protein 31 1.9
At2g07981.1 68415.m01008 hypothetical protein 31 1.9
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 31 1.9
At5g53800.1 68418.m06685 expressed protein 30 2.5
At5g47430.1 68418.m05844 expressed protein 30 2.5
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 30 2.5
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 30 2.5
At4g35940.1 68417.m05113 expressed protein 30 2.5
At3g25840.1 68416.m03219 protein kinase family protein contains ... 30 2.5
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 30 2.5
At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta... 30 2.5
At5g55820.1 68418.m06956 expressed protein 30 3.3
At5g40450.1 68418.m04905 expressed protein 30 3.3
At5g11260.1 68418.m01315 bZIP protein HY5 (HY5) identical to HY5... 30 3.3
At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein... 30 3.3
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 30 3.3
At3g19670.1 68416.m02492 FF domain-containing protein / WW domai... 30 3.3
At3g09400.1 68416.m01116 protein phosphatase 2C family protein /... 30 3.3
At1g22450.1 68414.m02806 cytochrome c oxidase subunit 6b, putati... 30 3.3
At5g53930.1 68418.m06710 expressed protein 29 4.4
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 29 4.4
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 29 4.4
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 29 4.4
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi... 29 4.4
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 29 4.4
At2g02740.1 68415.m00217 transcription factor, putative similar ... 29 4.4
At5g60030.1 68418.m07527 expressed protein 29 5.8
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 29 5.8
At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar... 29 5.8
At2g30990.1 68415.m03780 expressed protein contains Pfam profile... 29 5.8
At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4) cont... 29 5.8
At2g17787.1 68415.m02061 expressed protein 29 5.8
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 29 5.8
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 29 5.8
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 29 7.7
At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing ... 29 7.7
At5g18750.1 68418.m02226 DNAJ heat shock N-terminal domain-conta... 29 7.7
At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit... 29 7.7
At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit... 29 7.7
At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit... 29 7.7
At4g19060.1 68417.m02808 disease resistance protein-related cont... 29 7.7
At3g52220.1 68416.m05737 expressed protein 29 7.7
At3g11890.2 68416.m01458 expressed protein 29 7.7
At3g11890.1 68416.m01457 expressed protein 29 7.7
At2g39320.1 68415.m04827 OTU-like cysteine protease family prote... 29 7.7
At2g26410.1 68415.m03169 calmodulin-binding family protein simil... 29 7.7
At2g02160.1 68415.m00152 zinc finger (CCCH-type) family protein ... 29 7.7
At1g75150.1 68414.m08729 expressed protein ; expression supporte... 29 7.7
At1g72760.1 68414.m08413 protein kinase family protein contains ... 29 7.7
At1g51080.1 68414.m05742 expressed protein 29 7.7
At1g29470.1 68414.m03605 dehydration-responsive protein-related ... 29 7.7
>At1g33520.1 68414.m04148 KOW domain-containing protein /
D111/G-patch domain-containing protein contains Pfam
profiles PF01585: G-patch domain, PF00467: KOW motif
Length = 462
Score = 42.3 bits (95), Expect = 6e-04
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 136 ESTLDDYDSVPIQDFGMAMLRGMGWTPNKDLPK 168
+ TL+D++SVP+ FG A++ G GW P K + K
Sbjct: 145 DPTLEDFESVPVDGFGAALMAGYGWKPGKGIGK 177
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 37.5 bits (83), Expect = 0.017
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 256 TKSEFDKESKVINAXXXXXXXXXXXVPQSSKEKDIESSPKRETKKEKYEHTDRREREDWS 315
TK+E D++ KV V +S K + SS + E+K+EK E + E
Sbjct: 293 TKNEEDEKEKV------QSSEEESKVKESGKNEKDASSSQDESKEEKPERKKKEESSSQG 346
Query: 316 NGKNRKEDRHRRDSSSTGEERSQ 338
GK + ++ ++ SS+ EE +
Sbjct: 347 EGKEEEPEKREKEDSSSQEESKE 369
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 286 KEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEE 335
++K ESS + E K+E+ E ++ + K + + +++SS+ EE
Sbjct: 336 RKKKEESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEKEASSSQEE 385
>At5g12230.1 68418.m01435 expressed protein
Length = 221
Score = 37.1 bits (82), Expect = 0.022
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 286 KEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSS 330
K KD + RE KK K++H DR + +D ++RK+D++ S
Sbjct: 131 KHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDS 175
>At4g25020.1 68417.m03589 KOW domain-containing protein /
D111/G-patch domain-containing protein contains Pfam
profiles PF01585: G-patch domain, PF00467: KOW motif
Length = 375
Score = 36.7 bits (81), Expect = 0.029
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 5 KISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTER 64
K+SF K+ + ++KD C+ ++K E D + + KP +I
Sbjct: 2 KLSFSLPPKSKSRVSLNSDRKD---CIGAGNLKQFVTEF--DPSETLTDSKPKYVIPPIE 56
Query: 65 LKQIAQKVESALDEPEVVKSDSPKTVEIP-----ENETLEQMAVRELMEDTKKKVNIETS 119
++ + + ++D P S EIP +N + +R+ +E+ +K +E
Sbjct: 57 DRRRSYR---SIDLPLPSASGLQFEAEIPSGDGSDNNITYGLNLRQKVENVEKPEPVEKM 113
Query: 120 AI-TVPLPAKPVTDGEKESTLDDYDSVPIQDFGMAMLRGMGWTPNKDL 166
+ ++ + + D ++ +D++S P+ FG A+L G GW P + +
Sbjct: 114 LLKSMRTDLESLPDAPEK---EDFESFPVDGFGEALLAGYGWKPGQGI 158
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 35.5 bits (78), Expect = 0.067
Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 12 KTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQK 71
+TK+ + D KK E ++ ++ K G ++ +T I + TL+ ++ + +K
Sbjct: 144 ETKETDITEADHKKAGKEDIQHEADKANGTKD--GNTGDI--KEEGTLVDEDKGTDMDEK 199
Query: 72 VESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTK---KKVNIETSAITVPLPAK 128
VE+ + +V + + + EN+T E A + ++++K +K E + +K
Sbjct: 200 VENGDENKQVENVEGKEKEDKEENKTKEVEAAKAEVDESKVEDEKEGSEDENDNEKVESK 259
Query: 129 PVTDGEKESTLDDYDSVPIQDFGMAMLRGMG 159
+ EKE T DD + + G + RG G
Sbjct: 260 DAKEDEKEETNDDKEDEKEESKG-SKKRGKG 289
>At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit GB:CAA77136 from [Nicotiana plumbaginifolia]
Length = 589
Score = 35.5 bits (78), Expect = 0.067
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 3/113 (2%)
Query: 229 EDNGRAM-VNIVMKNET-VNLSEFMMHPVTKSEFDKESKVINAXXXXXXXXXXXVPQSSK 286
E NG + ++ NE ++L H +KS + K ++ +K
Sbjct: 5 EGNGDGVAISTENHNENYISLESSPFHEDSKSRESHDLKKDSSKISEKDNENGRDKDGNK 64
Query: 287 EKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRD-SSSTGEERSQ 338
++D E RE +++ R D K+R+ DRH RD ERS+
Sbjct: 65 DRDREKDRDREKSRDRDREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRERSE 117
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 286 KEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQXXXXXXX 345
+++ E S KR+ + + H R+R+ + +E RHRR S S RS+
Sbjct: 109 RDRSRERSEKRDDLDDDH-HRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSEH 167
Query: 346 RY 347
R+
Sbjct: 168 RH 169
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 35.1 bits (77), Expect = 0.088
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 233 RAMVNIVMKNETVNLSEFMMHPVTKSEFDKESKVINAXXXXXXXXXXXVPQSSKEKDIES 292
R VN + N+ + + M+ + + +++ + +N V + +EK+ +
Sbjct: 346 RVKVNEAVANDNIKKLKKMLSEIEVAMEEEKQRSLNRQESMPKEVVEVVEKKIEEKE-KK 404
Query: 293 SPKRETKKEKYEHT-DRREREDWSNGKNRKEDRHR 326
K+E KKEK E +++E + K +KE H+
Sbjct: 405 EEKKENKKEKKESKKEKKEHSEKKEDKEKKEQTHQ 439
>At2g08986.1 68415.m01009 hypothetical protein
Length = 1218
Score = 35.1 bits (77), Expect = 0.088
Identities = 30/137 (21%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 6 ISFGF-MKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTER 64
+ FG+ MK +++K V + K + + + ++K + +++ D P T+
Sbjct: 1046 MDFGYTMKALRSKKKVYTKPKIHTDF--DYTMKYMRSKKKVDTKPKTHMDFGYTMNALRS 1103
Query: 65 LKQIAQKVESALDEPEVVKS-DSPKTVEIPENETLEQMAVRELMEDTKKKVNIETSAITV 123
K++ K ++ +D +K+ S K VE+ L+ + + L+EDTK K +++
Sbjct: 1104 KKKVDTKPKTHMDFGYTMKALRSKKKVELKPQPDLKGVRIESLLEDTKPKTHMDLGYTMK 1163
Query: 124 PLPAKPVTDGEKESTLD 140
L +K D + ++ +D
Sbjct: 1164 ALRSKKKVDTKPKTHMD 1180
Score = 33.1 bits (72), Expect = 0.36
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 2/132 (1%)
Query: 25 KDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPN-TLITTERLKQIAQKVESALDEPEVVK 83
K +E + +K V + +DT M+ T+ K++ K ++ +D + +K
Sbjct: 478 KKKVELKPQPDLKGVRIVSLLEDTKPKTHMEFGYTMKAFRSKKKVDTKPKTHMDFGDTMK 537
Query: 84 S-DSPKTVEIPENETLEQMAVRELMEDTKKKVNIETSAITVPLPAKPVTDGEKESTLDDY 142
+ S K VE+ L+ ++ L+EDTK K + + L +K S L+D
Sbjct: 538 ALKSKKNVELKPQPDLKSLSSDSLLEDTKPKTHTDFDYTMKALRSKKKVGVRIVSLLEDT 597
Query: 143 DSVPIQDFGMAM 154
D G M
Sbjct: 598 KPKTHMDLGYTM 609
Score = 32.7 bits (71), Expect = 0.47
Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Query: 6 ISFGF-MKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTER 64
+ FG+ MK +++K V + K I + ++K + +++ D P T+
Sbjct: 263 MDFGYTMKALRSKKKV--DTKPKIHTDFDYTVKALRSKKKVDTKPKTHMDFGYTMKALRS 320
Query: 65 LKQIAQKVESALDEPEVVKS-DSPKTVEIPENETLEQMAVRELMEDTKKKVNIETSAITV 123
K + K ++ +D +KS K VE+ + L+ + + L+EDTK K +++
Sbjct: 321 KKTVDIKPKTHMDFGYTMKSLRRKKKVELKQQPDLKGVRIVSLLEDTKPKTHMDFGYTMK 380
Query: 124 PLPAKPVTDGEKESTLD 140
L +K D + ++ +D
Sbjct: 381 ALISKKKVDTKPKTHMD 397
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 86 SPKTVEIPENETLEQMAVRELMEDTKKKVNIETSAITVPLPAKPVTDGEKESTLDDYDSV 145
S K VE+ L+ + + L+EDTK K ++E +K D + ++ +D D++
Sbjct: 477 SKKKVELKPQPDLKGVRIVSLLEDTKPKTHMEFGYTMKAFRSKKKVDTKPKTHMDFGDTM 536
>At5g53440.1 68418.m06641 expressed protein
Length = 1181
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDR-HRRDSSSTGEE 335
+ +++D + +R+ + YEH DR DW ++R DR H RD + E+
Sbjct: 331 ERDRDRDRDRDRERDRDRRDYEH-DRYHDRDWDRDRSRDRDRDHERDRTHDREK 383
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
+SS++KD E RE ++K +R +E + +++ DR RR+ RS+
Sbjct: 81 RSSRDKDRERDKVREGSRDKESDRERSSKERDRSDRDKPRDRERREREKRSSSRSR 136
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 286 KEKDIESSPKRETK--KEKYEHTDRREREDWSNGKNRKEDR 324
KE D E S K + ++K +RRERE S+ ++R+E++
Sbjct: 100 KESDRERSSKERDRSDRDKPRDRERREREKRSSSRSRREEK 140
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 34.7 bits (76), Expect = 0.12
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 261 DKESKVINAXXXXXXXXXXXVPQSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNR 320
DKE++ I +KEK+ ESS + ETK+++ E ++ E K +
Sbjct: 541 DKENEKIEKEEASSQEESKENETETKEKE-ESSSQEETKEKENEKIEKEESAPQEETKEK 599
Query: 321 KEDRHRRDSSSTGEERSQ 338
+ ++ ++ S++ EE +
Sbjct: 600 ENEKIEKEESASQEETKE 617
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEER 336
++ K + ES+P+ ETK+++ E ++ E K ++ + ++ SS+ E +
Sbjct: 581 ENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQ 634
Score = 29.5 bits (63), Expect = 4.4
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 291 ESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
ESS + ETK ++ E ++ E K + + ++ SS+ EE +
Sbjct: 532 ESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKE 579
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 284 SSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
S E D+E +R+ ++ + RE E GK+RK DR R + ER +
Sbjct: 99 SDSEDDVEEEDERDKRRVNEKERGHREHER-DRGKDRKRDREREERKDKEREREK 152
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 286 KEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
+++D E +++ ++E+ + +RRERE K R ++R RR+ +R +
Sbjct: 134 RKRDREREERKDKEREREKDRERREREREEREKERVKERERREREDGERDRRE 186
Score = 32.3 bits (70), Expect = 0.62
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
+ K+++ + E +KE+ + +RRERED G+ + +R + S ER +
Sbjct: 149 EREKDRERREREREEREKERVKERERRERED---GERDRREREKERGSRRNRERER 201
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 286 KEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERS 337
+E++ E +RE ++ + DRRERE G R +R R S G E S
Sbjct: 162 EEREKERVKERERREREDGERDRREREK-ERGSRRNRERER--SREVGNEES 210
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 33.9 bits (74), Expect = 0.20
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Query: 29 ECVEEKSIKVVGAEEIKDDTPLIIPMKPNT--LITTERLKQIAQKVESALDEPEVV--KS 84
+ VE + + V T P++ T L+ E K I + E+ ++ PEVV K
Sbjct: 23 KAVESEEVTTVSESLPAPVTESQAPVEVTTKDLVVEETEKPIEETEEAQVETPEVVEIKK 82
Query: 85 DSPKTVEIP---ENETLEQMAVRELMEDTKKKVNIETSAITVPLPAKPVTDGEK 135
D VE P E+E+ + V E+ ++ E + + V KP + EK
Sbjct: 83 DEEAPVETPVVVEDESKTEEVVEAKKEEEVEEKKTEEAPVVVEEEKKPEAEEEK 136
>At3g42580.1 68416.m04420 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 903
Score = 33.5 bits (73), Expect = 0.27
Identities = 23/107 (21%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 14 KKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTE-RLKQIAQKV 72
K+ ++P + ++ ++ + S V G E+ D P+++P + E L + ++
Sbjct: 560 KRNDEPTSGDGEEVLKEAQSPSFVVEGVEDTADQVPIVVPDRTLEAFDDEANLNNVVEEK 619
Query: 73 ESALDEPEVVKSDSPK---TVEIPENETLEQMA--VRELMEDTKKKV 114
ES + E + V K V + ++T E +A V + ++ ++KV
Sbjct: 620 ESPIPEKDTVPEHPGKKDDVVHMGVSQTEENVAHDVEKEKKNVRRKV 666
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 33.1 bits (72), Expect = 0.36
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 285 SKEKDI-ESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEER 336
+KEKD E +RE ++EK E RERE K R+ ++ R+ ++R
Sbjct: 133 AKEKDRHEKQKEREREREKLEREKEREREKIEREKEREREKMEREIFEREKDR 185
>At4g37490.1 68417.m05305 G2/mitotic-specific cyclin (CYC1) / B-like
cyclin (CYC1) identical to SP|P30183 G2/mitotic-specific
cyclin (B-like cyclin) {Arabidopsis thaliana}
Length = 428
Score = 33.1 bits (72), Expect = 0.36
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 58 TLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPE-----NETLEQMAVRELMEDTKK 112
TL+ + LK+ K +A+ +P+ V + PK V++ E +E L +A RE + TKK
Sbjct: 65 TLLVEDNLKKPVVK-RNAVPKPKKV-AGKPKVVDVIEISSDSDEELGLVAARE-KKATKK 121
Query: 113 KVNIETSAITVPLPAKPVTDGEKESTLDDYDSVPIQD 149
K TS +T A + +++ + D DS +++
Sbjct: 122 KATTYTSVLTARSKAACGLEKKQKEKIVDIDSADVEN 158
>At3g50670.1 68416.m05542 U1 small nuclear ribonucleoprotein 70
(U1-70k)
Length = 427
Score = 32.7 bits (71), Expect = 0.47
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 282 PQSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
P+ +EK E +RE +E H RER S + R ED+H RD G +R +
Sbjct: 261 PREEREKSREKGKERERSRE-LSHEQPRER---SRDRPR-EDKHHRDRDQGGRDRDR 312
>At3g11560.3 68416.m01412 expressed protein
Length = 872
Score = 32.7 bits (71), Expect = 0.47
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 57 NTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRE-LMEDTKKKVN 115
N LI E K++ + + ++DE E++ D+P++ E+ L Q +E +ME T +K+
Sbjct: 696 NELIELE--KRVKRSTDQSVDEEELISEDTPQSSSRTESVQLVQTPKKENMMEKTLQKLR 753
Query: 116 IETSAI 121
T+ +
Sbjct: 754 EATTDV 759
>At3g11560.2 68416.m01411 expressed protein
Length = 872
Score = 32.7 bits (71), Expect = 0.47
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 57 NTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRE-LMEDTKKKVN 115
N LI E K++ + + ++DE E++ D+P++ E+ L Q +E +ME T +K+
Sbjct: 696 NELIELE--KRVKRSTDQSVDEEELISEDTPQSSSRTESVQLVQTPKKENMMEKTLQKLR 753
Query: 116 IETSAI 121
T+ +
Sbjct: 754 EATTDV 759
>At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing
protein
Length = 561
Score = 32.7 bits (71), Expect = 0.47
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 286 KEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
+++D E +E + K DR + D S G++ ++DR RR S + RSQ
Sbjct: 87 RDRDREKDVDKEERNGKDRERDRDKDRD-SKGRDHEKDRSRRSRSRSERHRSQ 138
Score = 32.3 bits (70), Expect = 0.62
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 281 VPQSSKEKDIESSPKRETKKEKYEHTD-RREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
V KE+ S + + KKE+ E D RR + S+ ++R DR R S+ E R +
Sbjct: 31 VKSEGKERSRSSRHRGDKKKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDR 89
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 286 KEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHR-RDSSSTGEERSQ 338
+E+D S + +++ + D+ ER NGK+R+ DR + RDS E+ +
Sbjct: 75 RERDRHRSSREHRDRDREKDVDKEER----NGKDRERDRDKDRDSKGRDHEKDR 124
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 32.7 bits (71), Expect = 0.47
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 18/132 (13%)
Query: 19 PVVDEKK-DYIECVEEKSIKVVGAEE---IKDDTPLIIPMKPNTLITTE----RLKQIAQ 70
PV DEK E EK AE+ +K++ +++ K L E L++ +
Sbjct: 43 PVSDEKAVPEKEVTPEKEAPAAEAEKSVSVKEEETVVVAEKVVVLTAEEVQKKALEEFKE 102
Query: 71 KVESALDEPEVVKSDSP----KTVEIP-ENETLEQMAVRELMEDTKKKVNIETSAITVPL 125
V AL++ E +P KT E E ET E+ E E+T +V +E
Sbjct: 103 LVREALNKREFTAPVTPVKEEKTEEKKTEEETKEEEKTEEKKEETTTEVKVEEEK----- 157
Query: 126 PAKPVTDGEKES 137
PA P + EK S
Sbjct: 158 PAVPAAEEEKSS 169
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 32.3 bits (70), Expect = 0.62
Identities = 13/56 (23%), Positives = 30/56 (53%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
Q K+K+ + K+E +K+ E +++++E K K ++ ++D +ER +
Sbjct: 63 QEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKE 118
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQXXXX 342
+ ++KD E K++ ++++ E D+ E+E K RKE + E++ +
Sbjct: 76 KEKEKKDKEEKEKKDKERKEKEKKDKLEKE--KKDKERKEKERKEKERKAKEKKDKEESE 133
Query: 343 XXXRY 347
RY
Sbjct: 134 AAARY 138
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/49 (22%), Positives = 28/49 (57%)
Query: 288 KDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEER 336
KD + K++ ++++ + +R+E+E + K+D+ R++ +ER
Sbjct: 73 KDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKER 121
>At3g11860.1 68416.m01454 expressed protein ; expression supported
by MPSS
Length = 252
Score = 32.3 bits (70), Expect = 0.62
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 43 EIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMA 102
E+ D+ + + P+ + ++ + ES + +V+ +D KT P + Q+
Sbjct: 98 EVTQDSTFVHTVVPSLPLPEHFIRHKPETSESQAELRDVL-ADPHKTTHKPASSQ-SQVE 155
Query: 103 VRELMEDTKKKVNIETSAITVPLP 126
R++MEDT ++T ++PLP
Sbjct: 156 FRDVMEDTHGTTPLQTEMSSLPLP 179
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 32.3 bits (70), Expect = 0.62
Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
++ K ++ + + E K+ + E T+R++RE+ + R+E+R R + + E +
Sbjct: 452 EARKREEAKRREEEEAKRREEEETERKKREE-EEARKREEERKREEEEAKRREEER 506
Score = 32.3 bits (70), Expect = 0.62
Identities = 12/56 (21%), Positives = 30/56 (53%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
+ +++++ E + E K++ E R+ERE+ + +++R RR+ + E +
Sbjct: 514 EQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEER 569
Score = 31.9 bits (69), Expect = 0.82
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 286 KEKDIESSPKR-ETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEE 335
+ K+ E + KR E K+ + E RRE E+ K +E+ +R+ EE
Sbjct: 446 RRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKREE 496
Score = 31.9 bits (69), Expect = 0.82
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 283 QSSKEKDIESSPKRETKKEKYEH--TDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
+ +EK+ E + KRE ++++ E +R+ RE+ + +E R R + EE ++
Sbjct: 520 EEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAK 577
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/46 (26%), Positives = 26/46 (56%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRD 328
+ +E++ E + KRE ++EK E ++ E+ + + +R RR+
Sbjct: 506 RKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRRE 551
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 286 KEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
+E++IE K E + K E RRE E+ + + +R +R+ + +
Sbjct: 439 EEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEE 491
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 283 QSSKEKDIESSPKRETKKEKY--EHTDRREREDWSNGKNRKEDRHRRDSSSTGEERS 337
+ ++K E + KRE + K E R+ERED K R+E+ RR+ EE +
Sbjct: 622 EMERKKREEEARKREEEMAKIREEERQRKEREDVER-KRREEEAMRREEERKREEEA 677
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/56 (21%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
+ +K ++ E + E ++ + + RE+E+ K R+E+R R++ +R +
Sbjct: 497 EEAKRREEERKKREEEAEQARKREEEREKEE-EMAKKREEERQRKEREEVERKRRE 551
>At2g04330.1 68415.m00429 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 564
Score = 32.3 bits (70), Expect = 0.62
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 1/123 (0%)
Query: 15 KAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVES 74
K K KK+ ++ +K+ A+ + M N TT L A
Sbjct: 41 KKAKVQAPAKKEKVQAPAKKAKVQAPAKTTATAQTIATAMATNAAPTTAALTTTAPTTAP 100
Query: 75 ALDEPEVVKSDSPKTVE-IPENETLEQMAVRELMEDTKKKVNIETSAITVPLPAKPVTDG 133
+ P + S ++ IP ET E M E+ ++ +K+ ET A PV +
Sbjct: 101 TTESPMLDDSTFYDALKHIPAEETQENMQTDEVEDENEKEEGKETETNKELACANPVEEA 160
Query: 134 EKE 136
E++
Sbjct: 161 ERQ 163
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 32.3 bits (70), Expect = 0.62
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 283 QSSKEKDIESSPKRETKKEKYE--HTD-RREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
++ KEKD ES P+ + KK E H D +E+E+ +K + +D S T E++ +
Sbjct: 136 KNKKEKD-ESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEEKKKK 193
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/55 (21%), Positives = 31/55 (56%)
Query: 282 PQSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEER 336
P++ K+++ ++ K+++K E E + ++++ KN+K+D + EE+
Sbjct: 401 PEAEKKEEDDTEEKKKSKVEGGESEEGKKKKKKDKKKNKKKDTKEPKMTEDEEEK 455
>At5g42820.2 68418.m05216 U2 snRNP auxiliary factor small subunit,
putative strong similarity to U2 snRNP auxiliary factor,
small subunit [Oryza sativa] GI:3850816
Length = 283
Score = 31.9 bits (69), Expect = 0.82
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 285 SKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEER 336
S+ + I KRE +E+ E D R+R+ NGK + R D G R
Sbjct: 198 SRSRSISPRRKREHSRER-ERGDVRDRDRHGNGKRSSDRSERHDRDGGGRRR 248
>At5g42820.1 68418.m05215 U2 snRNP auxiliary factor small subunit,
putative strong similarity to U2 snRNP auxiliary factor,
small subunit [Oryza sativa] GI:3850816
Length = 283
Score = 31.9 bits (69), Expect = 0.82
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 285 SKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEER 336
S+ + I KRE +E+ E D R+R+ NGK + R D G R
Sbjct: 198 SRSRSISPRRKREHSRER-ERGDVRDRDRHGNGKRSSDRSERHDRDGGGRRR 248
>At3g57930.1 68416.m06457 expressed protein
Length = 141
Score = 31.9 bits (69), Expect = 0.82
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 2 EGKKISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIK-DDTPLIIPMKPNTLI 60
E +KI F K + +KPV DE+++ EE+ +K EE K DDT + K N
Sbjct: 23 EEEKIP-AFRKRGRPQKPVKDEEEE-----EEELVKKTDEEEDKDDDTNGSVTSKENVTE 76
Query: 61 TTERLKQIAQKVESALDEPE 80
+ K+ + ES + E E
Sbjct: 77 NGRKRKKPVESKESNITEEE 96
>At3g26560.1 68416.m03315 ATP-dependent RNA helicase, putative
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00575: S1 RNA binding domain
Length = 1168
Score = 31.9 bits (69), Expect = 0.82
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 286 KEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHR 326
K K++E +RE ++ + E R+R+ +G++R DR+R
Sbjct: 106 KVKELEKEIEREAEERRREEDRNRDRDRRESGRDRDRDRNR 146
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKED-RHR---RDSSSTGEER 336
+S +++D + + R+ ++++ H DR G++R+ D RHR R GE+R
Sbjct: 135 ESGRDRDRDRNRDRDDRRDR--HRDRERNRGDEEGEDRRSDRRHRERGRGDGGEGEDR 190
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 31.9 bits (69), Expect = 0.82
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 286 KEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
K +I SS E KK++ E ++E ED K +KED +++ EE ++
Sbjct: 173 KHAEIISSKTEEEKKKEEEDKKKKEEED----KKKKEDEKKKEEEKKKEEENK 221
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKED 323
+ K+K+ E K+E +K+K E + E G+ +KE+
Sbjct: 191 EDKKKKEEEDKKKKEDEKKKEEEKKKEEENKKKEGEKKKEE 231
>At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 385
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNR---KEDRHRRDSSSTGEERSQ 338
+ K+++ E R ++E+ DRR R D+ + R ++DR R D S RS+
Sbjct: 258 EREKDRERERGRDRYRERERDYGNDRRSRRDYDSRSRRNDYEDDRSRHDRRSRSRSRSR 316
>At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 393
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNR---KEDRHRRDSSSTGEERSQ 338
+ K+++ E R ++E+ DRR R D+ + R ++DR R D S RS+
Sbjct: 266 EREKDRERERGRDRYRERERDYGNDRRSRRDYDSRSRRNDYEDDRSRHDRRSRSRSRSR 324
>At1g11120.1 68414.m01273 expressed protein
Length = 367
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 74 SALDEPEVVK---SDSPKTVEIPENETLEQMAVRELMEDTKKKVNIETSAITVPLPAKP- 129
S +DE VVK S++ +N T+E+ + ++ E+ +KK I P+ KP
Sbjct: 129 SVIDEETVVKEVLSETTLLTSSNDNSTVEKTTLTKIQEEEEKKPGIVVDVAQEPVLTKPS 188
Query: 130 VTDGEKESTLDD 141
+ + EK S + +
Sbjct: 189 LVEPEKGSEVSE 200
>At5g55670.1 68418.m06941 RNA recognition motif (RRM)-containing
protein
Length = 710
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 287 EKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGE 334
E+DI P+ + Y+ +RR R+D G+ R+ + H +D + E
Sbjct: 589 ERDI---PREKDVGHGYDMPERRHRDDRDTGREREREHHHKDRERSRE 633
>At3g18420.1 68416.m02342 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile: PF00515 tetratricopeptide
repeat domain (TPR domain)
Length = 316
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 15 KAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTP 49
KAE PV +K Y E EEK ++ E+ D TP
Sbjct: 81 KAESPVTTIEKTYEEVKEEKLSEITPLSELLDSTP 115
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 31.1 bits (67), Expect = 1.4
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 28 IECVEEKSIKVVGAE----EIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVK 83
+E V+ +S++ V AE ++KD L + KP T+E+++ +K E EVVK
Sbjct: 213 VESVDVQSVRDVSAEIAEEKVKDVEALEVEPKPE---TSEKVETQLEKARELETEVEVVK 269
Query: 84 SDSPKTVEIPENETLEQMAVRELMEDTKKKVNIETSAITVPLPAKPVTDGEKESTLDDYD 143
++ +T E E +E E + +K I + + E ST+ + +
Sbjct: 270 AE--ETAEATEQAKVELEGKLEDVIVEEKDSEINSKDEKTSESGSALCSEEILSTIQESN 327
Query: 144 SVPIQD 149
+ PI++
Sbjct: 328 TDPIKE 333
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 31.1 bits (67), Expect = 1.4
Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 9/129 (6%)
Query: 217 YSGYYGKVLSLDEDNGRAMVNIVMKNETVNLSEFMMHPVTKSEFDKESKVINAXXXXXXX 276
Y G+V +E R + + E NL S ++ +++
Sbjct: 716 YDDLVGRVKEKEEKEARKLQRLA--EEFTNLLHTFKEITVASNWEDSKQLVEESQEYRSI 773
Query: 277 XXXXVPQSSKEKDIESSPKRETKKEKY--EHTDRREREDWSNGKNRKEDRHRRDSS---- 330
V Q E+ I S ++ +KE+ E R+E+E K + +D+ RR+
Sbjct: 774 GDESVSQGLFEEYITSLQEKAKEKERKRDEEKVRKEKERDEKEKRKDKDKERREKERERE 833
Query: 331 -STGEERSQ 338
G+ERS+
Sbjct: 834 KEKGKERSK 842
>At5g55840.1 68418.m06958 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 1274
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 225 LSLDEDNGRAMVNIVMKNETVNLSEFMMHPVTKSEFDKESK 265
+SLD+D AMV+++ +N S ++H ++K ES+
Sbjct: 855 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 895
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 30.7 bits (66), Expect = 1.9
Identities = 69/349 (19%), Positives = 133/349 (38%), Gaps = 21/349 (6%)
Query: 2 EGKKISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNT-LI 60
+GKK K K + V K++ ++ +++S KV E+ + + K N L
Sbjct: 749 KGKKKESKENKKTKTNENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLS 808
Query: 61 TTERLKQIAQKV--ESALDEPEVVKSDSPKTVEIPENETLE-QMAVRELMEDTKKKVNIE 117
+TE + ++ ++ D+ E S + E EN ++ + +E +D K ++E
Sbjct: 809 STENRDEAKERSGEDNKEDKEESKDYQSVEAKEKNENGGVDTNVGNKEDSKDLKDDRSVE 868
Query: 118 TSAI---TVPLPAKPVTDGEKESTLDDYDSVPIQDFGMAMLRGMGWTPNKDLPKYKQPQL 174
A ++ + V +K ST + D D + +G G + KYK+ +
Sbjct: 869 VKANKEESMKKKREEVQRNDKSSTKEVRDFANNMDIDVQ--KGSG-----ESVKYKKDE- 920
Query: 175 RPKGLGLGAXXXXXXXXXXXXXXNGEELTIVKNSFVKITTGKYSGYYGKVLSLDEDNGRA 234
+ +G ++ KNS +K Y L EDN +
Sbjct: 921 KKEGNKEENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKE 980
Query: 235 MV---NIVMKNETVNLSEFMMHPVTKSEFDKESKVINAXXXXXXXXXXXVPQSSKEKDIE 291
N +K E + E + S+ ++E K + S++K E
Sbjct: 981 TTKSENSKLKEENKDNKEKKESEDSASK-NREKKEYEEKKSKTKEEAKKEKKKSQDKKRE 1039
Query: 292 S--SPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
S +R++KKEK E D + ++ K +KE + + ++ +
Sbjct: 1040 EKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHE 1088
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRR 327
+ KE + S K+E KKE ++ ++ ED K +E + R+
Sbjct: 1068 KEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRK 1112
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEE 335
+ +KEK + K + K++K EH D + + + K +K +H S EE
Sbjct: 1065 EETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKK--KHEESKSRKKEE 1115
>At2g07981.1 68415.m01008 hypothetical protein
Length = 413
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 86 SPKTVEIPENETLEQMAVRELMEDTKKKVNIETSAITVPLPAKPVTDGEKESTLD 140
S K VE+ L+ + + L+EDTK K +I+ L +K D + ++ +D
Sbjct: 246 SKKKVELKPQPDLKGVRIESLLEDTKPKTHIDFGYTMKALRSKKKVDTKPKTHMD 300
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 30.7 bits (66), Expect = 1.9
Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 4 KKISFGFMKTKKAEKPVVDEKKDYIE--CVEEKSIKVVGAEEIKDDTPLIIPMKPNTLIT 61
K+ S F K++EK + + K +E V+ +K E +KP +
Sbjct: 55 KEESDFFADLKESEKKALSDLKSKLEEAIVDNTLLKTKKKESSPMKEKKEEVVKPEAEVE 114
Query: 62 TERLKQIAQKVESALDEPEVVKSDSPK--TVEIPENETL---EQM--AVRELMEDTKKKV 114
++ + +KVE VV ++PK TVE E + E++ V ++ E+TK++
Sbjct: 115 KKKEEAAEEKVEEEKKSEAVVTEEAPKAETVEAVVTEEIIPKEEVTTVVEKVEEETKEEE 174
Query: 115 NIETSAITVPLPAKPVTDGEKESTLD 140
+T + A+ + +++ ++D
Sbjct: 175 KKTEDVVTEEVKAETIEVEDEDESVD 200
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 284 SSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRD-SSSTGEERSQ 338
S E +ES + E ++ + DR +R+ S+ K+ + R RRD SSS+ + S+
Sbjct: 60 SGSESGLESGSESEKEERRRSRKDRGKRK--SDRKSSRSRRRRRDYSSSSSDSESE 113
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 30.3 bits (65), Expect = 2.5
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 1 MEGKKISFGFMKTKKAEKPVVDEKKDYIECVEEKSIKVVGAEEI----KDDTPLI--IPM 54
M+G IS G +K K E + KD V +E K+ + LI +P
Sbjct: 18 MDGPFISVGILKDKIFETKHLGTGKDLDIVVSNAQTNEEYLDEAMLIPKNTSVLIRRVPG 77
Query: 55 KPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENE 96
+P + T + +I KVE E P E PE+E
Sbjct: 78 RPRITVITTQEPRIQNKVEDVQAETTNFPVADPSAAEFPEDE 119
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 293 SPKRETKKEKYEHTDRRERE-DWSNGKNRKEDR-HRRDSSSTGEERSQ 338
SP R++K++ + D R+R+ D +++ DR H R E+RS+
Sbjct: 685 SPSRDSKRKSERYPDERDRQRDRERSRHQDVDREHDRTRDRRDEDRSR 732
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 30.3 bits (65), Expect = 2.5
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Query: 243 ETVNLSEFMMHPVTKSEFDKESK-VINAXXXXXXXXXXXVPQSSKEKDIESSPKR---ET 298
E LSE M PVTK + K+ K ++ K ++ KR E+
Sbjct: 681 EKEELSE-MGKPVTKGKEKKDKKGKAKQKAEEIEVTGKEENETDKHGKMKKERKRKKSES 739
Query: 299 KKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
KKE E + ++ + S K RK + S GEE +Q
Sbjct: 740 KKEGGEGEETQKEANESTKKERKRKKSESKKQSDGEEETQ 779
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 30.3 bits (65), Expect = 2.5
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 11 MKTKKAEKPVVDE--KKDYIECVEEKSIKVVGAEEI-KDDTPLIIPMKPNTLITTERLKQ 67
M+T+K E P V E K + + E ++ EI K + P + + I L +
Sbjct: 181 METEKPEAPKVPEIPKPELPKLPEVPKLEAPKVPEIQKPELPKMPELPKMPEIQKPELPK 240
Query: 68 IAQ--KVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVNIETSAITVPL 125
+ + K+E A PE+ K + PK E+P+ +++ + ++ E K ++ VP
Sbjct: 241 LPEVPKLE-APKVPEIQKPELPKMPELPKMPEIQKPELPKMPEIQKPEL---PKVPEVPK 296
Query: 126 PAKPVTDGEKESTLDDYDSVP 146
P P +S + +P
Sbjct: 297 PELPTVPEVPKSEAPKFPEIP 317
>At4g35940.1 68417.m05113 expressed protein
Length = 451
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 285 SKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEE 335
S K +E K+E ++ K +D+++++D K +KE + ++ G+E
Sbjct: 25 SSIKGVEEKAKKEQRR-KDRRSDKKDKKDKKERKEKKEKKEKKRKEREGKE 74
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 285 SKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRR 327
S +KD + +R+ KKEK E R+ERE G ++ + RR
Sbjct: 45 SDKKDKKDKKERKEKKEKKE-KKRKEREGKEVGSEKRSHKRRR 86
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 30.3 bits (65), Expect = 2.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTD---RRERE-----DWSNGKNRKEDRHRRDSSSTGE 334
+ K ++IES +R +KE+ D R+ERE D +N + R DR R +S
Sbjct: 291 EREKRREIESDRERRKEKERERSIDRDRRKEREGDYLRDRANERGRSRDRTRYNSRERKR 350
Query: 335 ERSQ 338
E+ +
Sbjct: 351 EKER 354
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQXXXX 342
+ + +D RE K+EK +R +DW G+ ++DR + SS +
Sbjct: 333 ERGRSRDRTRYNSRERKREK----EREGEKDWERGRETQKDREKYISSDVDYGEMRHKQS 388
Query: 343 XXXRY 347
RY
Sbjct: 389 RNTRY 393
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 291 ESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEER 336
E S +E+++E+ E D R D+ + ++DRH R++ +R
Sbjct: 462 EESRDKESRRERDED-DHRSHRDYKERRRERDDRHGREARHERRDR 506
>At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta
antigen-related contains weak similarity to C protein
immunoglobulin-A-binding beta antigen [Streptococcus
agalactiae] gi|18028989|gb|AAL56250
Length = 731
Score = 30.3 bits (65), Expect = 2.5
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 53 PMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTK- 111
P +P + ++E+ K++ + PEV S+ K +++PE ++ ++ E ++ +
Sbjct: 489 PSRPE-IYSSEKAKEV--QAPEMPSRPEVFSSEKAKEIQVPEMPSIPEIQNSEKAKEVQA 545
Query: 112 -KKVNIETSAITVPLPAKPVTDGEKESTLDDYDS 144
++ + T A+ L VT+ E DD DS
Sbjct: 546 NNRMGLTTPAVAEGLNKSVVTN---EHIEDDSDS 576
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/54 (24%), Positives = 31/54 (57%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEER 336
+ K+K+ E + K+E +K+K E +R+ + ++ K ++E+ +R + +R
Sbjct: 1570 EDRKKKEAEMAWKQEMEKKKKEEERKRKEFEMADRKRQREEEDKRLKEAKKRQR 1623
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 32 EEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVE 91
+EK+ + V A + DD I + TER I +K+E + P V+++ + + +
Sbjct: 1253 QEKNAEPVEATQNLDDAEQI---SREVTVDTEREADITEKIEKVQEGPTVIETPTIQGED 1309
Query: 92 IPENETLE-QMAVRELMEDTKKKVNI 116
I +LE + V + +DT++ ++
Sbjct: 1310 IESETSLELKEEVDQSSKDTEEHEHV 1335
>At5g11260.1 68418.m01315 bZIP protein HY5 (HY5) identical to HY5
protein GI:2251085 from [Arabidopsis thaliana]
Length = 168
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 284 SSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQXXXXX 343
SS E+ S+P E K+ + R ++ KE R S+TG+ER+Q
Sbjct: 16 SSSERSSSSAPHLEIKEGIESDEEIRRVPEFGGEAVGKETSGRESGSATGQERTQATVGE 75
Query: 344 XXR 346
R
Sbjct: 76 SQR 78
>At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 595
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 286 KEKDI-ESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEER 336
KEK + E+S E ++Y T + E + SN ++RK+ GE R
Sbjct: 533 KEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESR 584
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 282 PQSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
P++ +E++ E K E +KE+ E + E E+ + KE+ + ++ ++
Sbjct: 79 PENVEEEESEEEEKEEEEKEEEEEEEGEEEEEEEEEEEEKEEEENVGGEESSDDSTR 135
>At3g19670.1 68416.m02492 FF domain-containing protein / WW
domain-containing protein weak similarity to
huntingtin-interacting protein HYPA/FBP11 [Homo sapiens]
GI:3341980; contains Pfam profiles PF01846: FF domain,
PF00397: WW domain
Length = 960
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 287 EKDIESSPKRETKKEKYEHTDRREREDWSNGK 318
E ++E KR K+E EHT E ED G+
Sbjct: 928 EAEVEGKEKRRRKEEAREHTKEEELEDGECGR 959
>At3g09400.1 68416.m01116 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2c
(GI:3608412) [Mesembryanthemum crystallinum]; contains
Pfam PF00481 : Protein phosphatase 2C domain
Length = 650
Score = 29.9 bits (64), Expect = 3.3
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 7 SFGFMKTKKAEKPVVDEKKDY--IECVEEKSIKVVGAEEIKD---DTPLIIPM--KPNTL 59
SF K KK+E + K + + C ++ IK + + D DT IP +T+
Sbjct: 163 SFTKPKLKKSESKIFTFKNVFTNLSCSKKSVIKPINGFDSFDGSSDTDRYIPEINSLSTI 222
Query: 60 ITTE---RLKQIAQKVESALDEPEV 81
+++ R+K+ K ESAL+EP++
Sbjct: 223 VSSHEKPRIKEEEDKTESALEEPKI 247
>At1g22450.1 68414.m02806 cytochrome c oxidase subunit 6b, putative
(COX6b) nearly identical to subunit 6b of cytochrome c
oxidase [Arabidopsis thaliana] GI:6518353
Length = 191
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 41 AEEIK-DDTPLIIPMKPNTLITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLE 99
AEE+K + P++ + E+ + + E A + P + ++ +T E E +
Sbjct: 44 AEEVKTEQAKEESPVEEAVSVVEEKSESAPESTEVASEAPAAAEDNAEETPAAAE-ENND 102
Query: 100 QMAVRELMEDTKKKVNIETSAITVPLP 126
+ A E+ E+T ++ +ET+ P
Sbjct: 103 ENASEEVAEETPDEIKLETAPADFRFP 129
>At5g53930.1 68418.m06710 expressed protein
Length = 529
Score = 29.5 bits (63), Expect = 4.4
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 11/60 (18%)
Query: 284 SSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKE----DRHRRD--SSSTGEERS 337
SS E D +S R KK+K R +R+D + GK +K+ R +RD SSST E+S
Sbjct: 78 SSSESDDDSDDDRLLKKKK-----RSKRKDENVGKKKKKVVSRKRRKRDLSSSSTSSEQS 132
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 29.5 bits (63), Expect = 4.4
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 62 TERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVNIETSAI 121
T R +++ QK E E EV + + I E M EL+ED + ++ +E +A+
Sbjct: 412 TIRAEKMRQK-EEMRKEKEVARLKAANERAIARKIAKESM---ELIEDERLEL-MEVAAL 466
Query: 122 TVPLPAKPVTDGEKESTLDDY 142
T LP+ D E LD+Y
Sbjct: 467 TKGLPSMLALDFETLQNLDEY 487
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/65 (21%), Positives = 26/65 (40%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQXXXX 342
+ K+K + +++ +KE+ H DR D K++ R + +S E
Sbjct: 85 EREKDKSRDRVKEKDKEKERNRHKDRENERDNEKEKDKDRARVKERASKKSHEDDDETHK 144
Query: 343 XXXRY 347
RY
Sbjct: 145 AAERY 149
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKE 322
+ KEKD+ ++ +++T + K E R+ + S GK+ K+
Sbjct: 824 EKKKEKDVIAAMEQDTDELKQETPSRKRKSQKSKGKSNKK 863
>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
protein similar to Hsc70-interacting protein (Hip) from
{Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
contains Pfam profile PF00515: tetratricopeptide repeat
(TPR) domain
Length = 441
Score = 29.5 bits (63), Expect = 4.4
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 25 KDYIECVEEKSIKVVGAEEIKDDTP--LIIPMKPNTLITTERLKQIAQKVESALDEPEVV 82
+DY+E + K I EE KD P ++ + + TE +K KVE +E E+V
Sbjct: 32 RDYLESLGAK-IPTGVHEEDKDTKPRSFVVEESDDDMDETEEVKP---KVEEEEEEDEIV 87
Query: 83 KSD---SPKTVEIPENETLEQM 101
+SD TVE P+N+ ++M
Sbjct: 88 ESDVELEGDTVE-PDNDPPQKM 108
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 291 ESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQXXXXXXXRY 347
E +++ KKEK E +R+ RE K+ + S S EE+ + +Y
Sbjct: 4 EGEERKKEKKEKKERKERKRREAEELAVREKKISKKHKSKSKEEEKPEKSKKKSKKY 60
>At2g02740.1 68415.m00217 transcription factor, putative similar to
DNA-binding protein p24 [Solanum tuberosum] GI:9651810,
Plant Transcriptional Regulator Pbf-2 [Solanum
tuberosum] (GI:21730639, GI:21730638, GI:21730640,
GI:21730637)
Length = 268
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 223 KVLSLDEDNGRAMVNIVMKNETVNLSEFMMHPVTKSEF 260
KV L + +GR N+ ++N+ +N+ E + P+TK+EF
Sbjct: 185 KVEPLPDGSGR-FFNLSVQNKLLNVDESVYIPITKAEF 221
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/41 (26%), Positives = 25/41 (60%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKED 323
+++K++D+ +E +++ + DR+ER+ + KN ED
Sbjct: 157 KNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDED 197
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 29.1 bits (62), Expect = 5.8
Identities = 25/131 (19%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 19 PVVDEKKDYIECVEEKSIKVVGAEEIKDDTPLIIPMKPNTLITTERLKQIAQKVESALDE 78
PV + + +EEK IK ++I++ T + N +E + + +K++ +
Sbjct: 258 PVGKDCNAVVAELEEKLIK--NEDDIEEKTEEMKEQDNNQANKSEEEEDVKKKIDEN-ET 314
Query: 79 PEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVNIETSAITVPLPAKPVTDGEKEST 138
PE V ++S + + E ++ V+E ++ ++ E + + V + EKE
Sbjct: 315 PEKVDTESKEVESVEETTQEKEEEVKEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKEKV 374
Query: 139 LDDYDSVPIQD 149
D + +++
Sbjct: 375 KGDEEKEKVKE 385
Score = 28.7 bits (61), Expect = 7.7
Identities = 17/82 (20%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 256 TKSEFDKESKVINAXXXXXXXXXXXVPQSSKEKDIESSPKRETKKEKYEHTDRREREDWS 315
T + D ESK + + V + KE+ +E K + K ++ + ++ E E+
Sbjct: 314 TPEKVDTESKEVESVEETTQEKEEEVKEEGKER-VEEEEKEKEKVKEDDQKEKVEEEEKE 372
Query: 316 NGKNRKE-DRHRRDSSSTGEER 336
K +E ++ + + S+ G+++
Sbjct: 373 KVKGDEEKEKVKEEESAEGKKK 394
>At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar to
SP|P23394 Pre-mRNA splicing factor RNA helicase PRP28
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00270: DEAD/DEAH box helicase, PF00271: Helicase
conserved C-terminal domain
Length = 733
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/39 (28%), Positives = 25/39 (64%)
Query: 286 KEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDR 324
+++D + R+ ++E+ DRRER+ + +NR+++R
Sbjct: 98 RDRDRDRDRDRDRERERDRERDRRERDREPDRRNREKER 136
>At2g30990.1 68415.m03780 expressed protein contains Pfam profile:
PF05097 protein of unknown function (DUF688)
Length = 573
Score = 29.1 bits (62), Expect = 5.8
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 16 AEKPVVDEKK--DYIECVEEKSIKVVGAEEIKDDTPL--IIPMKPNTLITTERLKQIAQK 71
+E PV ++ D + V++K + + I ++P I+P+K ++ K I Q
Sbjct: 381 SETPVAEKTLYVDIVHLVDKKVQEESKKQPILKESPSLDIVPVKDEEADISQP-KSIEQ- 438
Query: 72 VESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTK-KKVNIE 117
E+ + + K S K E P+++ + + +++E TK KK+++E
Sbjct: 439 -ENGNRDEDFTKFSSQKVEECPDHQAIVALPESDVVEITKEKKIDLE 484
>At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4)
contains Pfam domain PF00098: Zinc knuckle; identical to
cDNA CAX-interacting protein 4 GI:27651998
Length = 332
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 287 EKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRR 327
E + + KR+++KEK RR D S+ ++ ++DR ++
Sbjct: 247 EDEDDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDDRRQK 287
>At2g17787.1 68415.m02061 expressed protein
Length = 324
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 286 KEKDIES--SPKRETKKEKYEHTDRREREDWSN--GKNRKEDRHRRDSSSTG 333
KE IES K E KK++ + ++R+D N G++RK RH+R G
Sbjct: 15 KESLIESIKGAKEEVKKDRKHKRNEKDRKDRDNEAGRSRKH-RHKRRRKDEG 65
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 286 KEKDIESSPK----RETKKEKYEHTDRRERE-DWSNGKNRKEDRHRRDSSSTGEERSQ 338
KE D++S+ K KK H + R+ + + N KEDR +R EERS+
Sbjct: 747 KENDLKSAEKVKGVESNKKSTDPHVKKDSRDVERPHRTNSKEDRGKRKEKEKEEERSR 804
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 286 KEKDIESSPK----RETKKEKYEHTDRRERE-DWSNGKNRKEDRHRRDSSSTGEERSQ 338
KE D++S+ K KK H + R+ + + N KEDR +R EERS+
Sbjct: 717 KENDLKSAEKVKGVESNKKSTDPHVKKDSRDVERPHRTNSKEDRGKRKEKEKEEERSR 774
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 28.7 bits (61), Expect = 7.7
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 223 KVLSLDEDNGRAMVNIVMKNETVNLSEFMMHPVTKSEFDKESKVINAXXXXXXXXXXXVP 282
KV ++DED+ + KNE E K E KE+ + V
Sbjct: 182 KVENVDEDDKEEALK--EKNEAELAEE---EETNKGEEVKEANKEDDVEADTKVAEPEVE 236
Query: 283 QSSKEKDIESSPKRETKK-EKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
E E+ K E K+ EK E D +E E + + KED + +S+ E++ +
Sbjct: 237 DKKTESKDENEDKEEEKEDEKEESMDDKEDEKEESNDDDKED-EKEESNDDKEDKKE 292
>At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing
protein KIAA0332 - Homo sapiens, EMBL:AB002330
Length = 946
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/57 (21%), Positives = 26/57 (45%)
Query: 282 PQSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
P+ S ++ + R+ +E++ DR+ + + K H RD + +ER +
Sbjct: 882 PRKSSTRERDHDLGRDRDRERHRDRDRQHDLNRDRDRREKSSSHDRDDNDRSKERDR 938
>At5g18750.1 68418.m02226 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 884
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTG 333
+ KE+D ES+ + + +K+ +E D+ E NG NR + +SS+G
Sbjct: 341 KEDKEEDAESAEESDFRKKSHE--DQPFTETLPNGLNRTKKSKAAKNSSSG 389
>At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 565
Score = 28.7 bits (61), Expect = 7.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 287 EKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
E ++S PKRE++ + E + ++RE K R +DR RDS + R +
Sbjct: 30 EDQLDSKPKRESRDHERETSRSKDRE---REKGRDKDR-ERDSEVSRRSRDR 77
>At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 542
Score = 28.7 bits (61), Expect = 7.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 287 EKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
E ++S PKRE++ + E + ++RE K R +DR RDS + R +
Sbjct: 30 EDQLDSKPKRESRDHERETSRSKDRE---REKGRDKDR-ERDSEVSRRSRDR 77
>At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 573
Score = 28.7 bits (61), Expect = 7.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 287 EKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
E ++S PKRE++ + E + ++RE K R +DR RDS + R +
Sbjct: 30 EDQLDSKPKRESRDHERETSRSKDRE---REKGRDKDR-ERDSEVSRRSRDR 77
>At4g19060.1 68417.m02808 disease resistance protein-related
contains Pfam domain, PF00931: NB-ARC domain, a novel
signalling motif found in plant resistance gene products
Length = 383
Score = 28.7 bits (61), Expect = 7.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 284 SSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGE 334
S + +ES + + + EK + + E E WS+GK R + S+ G+
Sbjct: 9 SEIDDKLESKSEFDKELEKIKSSFNEEYEKWSSGKQRGSSSKHGNQSTHGD 59
>At3g52220.1 68416.m05737 expressed protein
Length = 237
Score = 28.7 bits (61), Expect = 7.7
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 287 EKDIESSPKRETKKEKYEHTDRREREDWS-NGKNRKEDRHRRDSSS 331
+++ E R K+E++E R+ +D + K +KE + R DS S
Sbjct: 191 KREKEERHDRREKRERHEKRSARDSDDRKKHKKEKKEKKRRHDSDS 236
>At3g11890.2 68416.m01458 expressed protein
Length = 527
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 89 TVEIPENETLEQMAVRELMEDTKKKVNIETSAITVPLPAKPVTDGE-KESTLDDYDSVPI 147
T+E P + RE ME T+ + T ++PLP P + E +++ D + + P+
Sbjct: 52 TLEKPAISPQLEAGFRESMEVTQDSTFVHTVVPSLPLPETPQSQAELRDALADTHFTTPV 111
>At3g11890.1 68416.m01457 expressed protein
Length = 500
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 89 TVEIPENETLEQMAVRELMEDTKKKVNIETSAITVPLPAKPVTDGE-KESTLDDYDSVPI 147
T+E P + RE ME T+ + T ++PLP P + E +++ D + + P+
Sbjct: 52 TLEKPAISPQLEAGFRESMEVTQDSTFVHTVVPSLPLPETPQSQAELRDALADTHFTTPV 111
>At2g39320.1 68415.m04827 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 189
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/53 (22%), Positives = 28/53 (52%)
Query: 286 KEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGEERSQ 338
++K+ E+ K E +KE+ + +++D + K KED+ + +E+ +
Sbjct: 125 RKKENEAKKKEEEEKERKDMEKEEKKKDKEDKKKDKEDKKKAKVQKEKKEKKE 177
>At2g26410.1 68415.m03169 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 516
Score = 28.7 bits (61), Expect = 7.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 283 QSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSS 331
+S+ + I+ +TK K E T+RR + +N K+D SSS
Sbjct: 335 KSASQSSIQWPVNNDTKSRKIEVTNRRHSIGGGSSENAKDDESVGSSSS 383
>At2g02160.1 68415.m00152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 669
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 290 IESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSSSTGE-ERSQXXXXXXXRY 347
I K ++++++ DRRE W + + E R D E ERS+ RY
Sbjct: 308 IADGDKEALREQRFDSYDRREDRGWGHRRVSSEREDRLDRRVYAEDERSENILESDLRY 366
>At1g75150.1 68414.m08729 expressed protein ; expression supported
by MPSS
Length = 753
Score = 28.7 bits (61), Expect = 7.7
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 67 QIAQKVESALDEPE----VVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVNIETSAIT 122
++++ ES ++P+ V + DSP + E E++ V E E KK+ +ET
Sbjct: 123 RVSETTESEKEDPDFETTVHEFDSPMEELGEKGEDEEEIRVPETKEAGKKRPIVETRD-- 180
Query: 123 VPLPAKPVTDGEKESTLDDYDSVPIQDFGMAMLR 156
+ D +++ DD+D +P+ M M +
Sbjct: 181 -GEGKERKRDKKRKKKSDDFDELPVSTASMNMTK 213
>At1g72760.1 68414.m08413 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 697
Score = 28.7 bits (61), Expect = 7.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 59 LITTERLKQIAQKVESALDEPEVVKSDSPKTVEIPENETLEQMAVRELMEDTKKKVNIET 118
+IT + + KVE A++ + + P E PE ETLE + + +KK +
Sbjct: 578 IITAQPAMGLGHKVEMAVENNNLREILDPTVSEWPEEETLELAKLALQCCELRKKDRPDL 637
Query: 119 SAITVP 124
+ + +P
Sbjct: 638 ALVLLP 643
>At1g51080.1 68414.m05742 expressed protein
Length = 285
Score = 28.7 bits (61), Expect = 7.7
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 223 KVLSLDEDNGRAMVNIVMKNETVNLSEFMMHPVTKSEFDKESKV----INAXXXXXXXXX 278
K+L +++ RA+ ++ E VN ++ + +D E K+ IN
Sbjct: 125 KILHGSDESMRALTSVRKSREEVNSVSMLLEISERFGWDNEDKIGWSKIN-FELLGTSKG 183
Query: 279 XXVPQSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGKNRKEDRHRRDSS 330
+P+ K + E ++ + + ++E E+ NG RK+ R R S
Sbjct: 184 GRIPRLRKANEEEEERGEMVRRREIK---KKEEEEDENGWRRKQRRERMRQS 232
>At1g29470.1 68414.m03605 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 28.7 bits (61), Expect = 7.7
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 281 VPQSSKEKDIESSPKRETKKEKYEHTDRREREDWSNGK-NRKEDRHRRDSSSTGEERSQ 338
V ++++EK E EK E + R+ D NG +RK +D+ S +E Q
Sbjct: 89 VTETNEEKTDPEKSGEENSGEKTESAEERKEFDDKNGDGDRKNGDGEKDTESESDETKQ 147
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.306 0.127 0.347
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,653,492
Number of Sequences: 28952
Number of extensions: 348816
Number of successful extensions: 1499
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1194
Number of HSP's gapped (non-prelim): 317
length of query: 420
length of database: 12,070,560
effective HSP length: 83
effective length of query: 337
effective length of database: 9,667,544
effective search space: 3257962328
effective search space used: 3257962328
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 61 (28.7 bits)
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