GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001455-TA|BGIBMGA001455-PA|undefined
         (152 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   1.8  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   4.3  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   4.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 33  AASTGPSQPTHR 44
           AA+TGP  PTHR
Sbjct: 913 AAATGPPPPTHR 924


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 6/55 (10%)

Query: 2    LLHRIKNFGYHNPRILANKTSLTVVPQQASTAASTGPSQPTHRASWSYGTQFHCF 56
            LLHR+    Y   R L ++ +L +    A   +S G S P  R S  + T   CF
Sbjct: 981  LLHRVDI--YAPSRTLRSRETLRL----AQPRSSAGRSDPMFRMSAVFNTVSDCF 1029


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 15   RILANKTSLTVVPQQASTAASTG 37
            RI  ++TS   VP  ++TAAS G
Sbjct: 1051 RIHISETSTDKVPNTSATAASAG 1073


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.128    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,368
Number of Sequences: 2123
Number of extensions: 4492
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 3
length of query: 152
length of database: 516,269
effective HSP length: 59
effective length of query: 93
effective length of database: 391,012
effective search space: 36364116
effective search space used: 36364116
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 44 (21.8 bits)