BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001455-TA|BGIBMGA001455-PA|undefined (152 letters) Database: human 224,733 sequences; 73,234,838 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value S57235-1|AAB25811.1| 354|Homo sapiens CD68 protein. 31 2.2 BT009923-1|AAP88925.1| 354|Homo sapiens CD68 antigen protein. 31 2.2 BC015557-1|AAH15557.1| 354|Homo sapiens CD68 molecule protein. 31 2.2 AK222492-1|BAD96212.1| 354|Homo sapiens CD68 antigen variant pr... 31 2.2 AK222514-1|BAD96234.1| 354|Homo sapiens CD68 antigen variant pr... 30 3.8 M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestina... 29 6.6 >S57235-1|AAB25811.1| 354|Homo sapiens CD68 protein. Length = 354 Score = 30.7 bits (66), Expect = 2.2 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Query: 12 HNPRILANKTSLTVVPQQASTAASTGPSQPTHR-ASWSYG 50 HNP ++ ++TV P STA S GPS TH A+ S+G Sbjct: 79 HNPTTTSHG-NVTVHPTSNSTATSQGPSTATHSPATTSHG 117 >BT009923-1|AAP88925.1| 354|Homo sapiens CD68 antigen protein. Length = 354 Score = 30.7 bits (66), Expect = 2.2 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Query: 12 HNPRILANKTSLTVVPQQASTAASTGPSQPTHR-ASWSYG 50 HNP ++ ++TV P STA S GPS TH A+ S+G Sbjct: 79 HNPTTTSHG-NVTVHPTSNSTATSQGPSTATHSPATTSHG 117 >BC015557-1|AAH15557.1| 354|Homo sapiens CD68 molecule protein. Length = 354 Score = 30.7 bits (66), Expect = 2.2 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Query: 12 HNPRILANKTSLTVVPQQASTAASTGPSQPTHR-ASWSYG 50 HNP ++ ++TV P STA S GPS TH A+ S+G Sbjct: 79 HNPTTTSHG-NVTVHPTSNSTATSQGPSTATHSPATTSHG 117 >AK222492-1|BAD96212.1| 354|Homo sapiens CD68 antigen variant protein. Length = 354 Score = 30.7 bits (66), Expect = 2.2 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Query: 12 HNPRILANKTSLTVVPQQASTAASTGPSQPTHR-ASWSYG 50 HNP ++ ++TV P STA S GPS TH A+ S+G Sbjct: 79 HNPTTTSHG-NVTVHPTSNSTATSQGPSTATHSPATTSHG 117 >AK222514-1|BAD96234.1| 354|Homo sapiens CD68 antigen variant protein. Length = 354 Score = 29.9 bits (64), Expect = 3.8 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Query: 12 HNPRILANKTSLTVVPQQASTAASTGPSQPTHR-ASWSYG 50 HNP ++ ++TV P STA S GPS TH A+ S+G Sbjct: 79 HNPTTTSHG-NVTVHPTGNSTATSQGPSTATHSPATTSHG 117 >M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestinal mucin mRNA, partial cds, clone SMUC 41. ). Length = 278 Score = 29.1 bits (62), Expect = 6.6 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 10 GYHNPRILANKTSLTVVPQQASTAASTGPSQPTHRAS 46 G P ++ T+ TV P T STGP PTH ++ Sbjct: 95 GTQTPTMIPISTTTTVTPTPTPTTGSTGP--PTHTST 129 Database: human Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 73,234,838 Number of sequences in database: 224,733 Lambda K H 0.322 0.128 0.425 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,495,970 Number of Sequences: 224733 Number of extensions: 710184 Number of successful extensions: 1464 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 1464 Number of HSP's gapped (non-prelim): 6 length of query: 152 length of database: 73,234,838 effective HSP length: 84 effective length of query: 68 effective length of database: 54,357,266 effective search space: 3696294088 effective search space used: 3696294088 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (22.0 bits) S2: 61 (28.7 bits)
- SilkBase 1999-2023 -