GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001455-TA|BGIBMGA001455-PA|undefined
         (152 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069727-1|AAL39872.1|  820|Drosophila melanogaster LP03135p pro...    29   3.6  
AE013599-2866|AAF57571.3|  862|Drosophila melanogaster CG10062-P...    29   3.6  

>AY069727-1|AAL39872.1|  820|Drosophila melanogaster LP03135p
           protein.
          Length = 820

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 23  LTVVPQQASTAASTGPSQPTHRASWSYGTQFHCFITPL 60
           +T++P Q  + +ST P        W +   F  FI PL
Sbjct: 518 VTLMPMQGRSGSSTNPDMVIAALVWLFSLMFAGFIAPL 555


>AE013599-2866|AAF57571.3|  862|Drosophila melanogaster CG10062-PA
           protein.
          Length = 862

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 23  LTVVPQQASTAASTGPSQPTHRASWSYGTQFHCFITPL 60
           +T++P Q  + +ST P        W +   F  FI PL
Sbjct: 560 VTLMPMQGRSGSSTNPDMVIAALVWLFSLMFAGFIAPL 597


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.128    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,221,825
Number of Sequences: 52641
Number of extensions: 216955
Number of successful extensions: 626
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 624
Number of HSP's gapped (non-prelim): 2
length of query: 152
length of database: 24,830,863
effective HSP length: 79
effective length of query: 73
effective length of database: 20,672,224
effective search space: 1509072352
effective search space used: 1509072352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 58 (27.5 bits)