GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001455-TA|BGIBMGA001455-PA|undefined
         (152 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   4.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    20   9.6  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    20   9.6  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    20   9.6  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    20   9.6  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 27 PQQASTAASTGPSQPTHRASWSY 49
          PQ + ++AST P+  T  + + Y
Sbjct: 69 PQHSGSSASTSPAARTTSSMYPY 91


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/18 (44%), Positives = 9/18 (50%)

Query: 60  LQFIAAHDRIINAWGHTS 77
           L   A  D  +  WGHTS
Sbjct: 284 LDSFAGSDVTVLGWGHTS 301


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 21  TSLTVVPQQASTAASTGPSQPTH 43
           T  T  P +  T  + GP+  TH
Sbjct: 415 TGATTGPNEIVTCTNCGPNPCTH 437


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 21  TSLTVVPQQASTAASTGPSQPTH 43
           T  T  P +  T  + GP+  TH
Sbjct: 401 TGATTGPNEIVTCTNCGPNPCTH 423


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 21  TSLTVVPQQASTAASTGPSQPTH 43
           T  T  P +  T  + GP+  TH
Sbjct: 435 TGATTGPNEIVTCTNCGPNPCTH 457


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 21  TSLTVVPQQASTAASTGPSQPTH 43
           T  T  P +  T  + GP+  TH
Sbjct: 384 TGATTGPNEIVTCTNCGPNPCTH 406


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.128    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,260
Number of Sequences: 429
Number of extensions: 1094
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 152
length of database: 140,377
effective HSP length: 53
effective length of query: 99
effective length of database: 117,640
effective search space: 11646360
effective search space used: 11646360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)