GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001454-TA|BGIBMGA001454-PA|undefined
         (70 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8DJA4 Cluster: Tlr1323 protein; n=1; Synechococcus elo...    33   1.5  
UniRef50_A7F7V8 Cluster: Predicted protein; n=1; Sclerotinia scl...    31   3.5  
UniRef50_Q23WL9 Cluster: Putative uncharacterized protein; n=1; ...    31   6.1  

>UniRef50_Q8DJA4 Cluster: Tlr1323 protein; n=1; Synechococcus
           elongatus|Rep: Tlr1323 protein - Synechococcus elongatus
           (Thermosynechococcus elongatus)
          Length = 625

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 5/53 (9%)

Query: 9   FSGNLQAGPASDPVKFGSDRIKVKSKIGQTRLGTNTHKEYLSETNIDKTNRIE 61
           F+G +  G +S P++ G DR+  +    Q RLG N H +   +TN+ K  R++
Sbjct: 309 FNGLMAQGVSSQPLQVG-DRLYEQ----QRRLGKNLHLQVALDTNLSKIERVD 356


>UniRef50_A7F7V8 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 725

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 12/36 (33%), Positives = 22/36 (61%)

Query: 25  GSDRIKVKSKIGQTRLGTNTHKEYLSETNIDKTNRI 60
           G D+I V+    +  LG+ THK Y+   +I++ +R+
Sbjct: 451 GCDKIFVRKDAMRNHLGSRTHKRYIESLSIEEKSRL 486


>UniRef50_Q23WL9 Cluster: Putative uncharacterized protein; n=1;
          Tetrahymena thermophila SB210|Rep: Putative
          uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1523

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 26 SDRIKVKSKIGQTRLGTNTHKEYLSETNIDKTN 58
          S  +K + KI  TR+  NT KE L +  I+K N
Sbjct: 30 SQLVKERKKIDSTRVFVNTGKELLKQARIEKMN 62


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.314    0.131    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,168,825
Number of Sequences: 1657284
Number of extensions: 2034523
Number of successful extensions: 3631
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3629
Number of HSP's gapped (non-prelim): 3
length of query: 70
length of database: 575,637,011
effective HSP length: 49
effective length of query: 21
effective length of database: 494,430,095
effective search space: 10383031995
effective search space used: 10383031995
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 65 (30.3 bits)