Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001453-TA|BGIBMGA001453-PA|undefined
(77 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36270.1 68415.m04452 bZIP transcription factor family protei... 29 0.37
At5g47490.1 68418.m05864 expressed protein 29 0.49
At5g47480.1 68418.m05863 expressed protein 27 1.5
At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transport... 26 2.6
At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transport... 26 3.5
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 26 3.5
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 26 3.5
At2g44340.1 68415.m05515 VQ motif-containing protein contains PF... 25 4.6
At2g44140.1 68415.m05490 autophagy 4a (APG4a) identical to autop... 25 4.6
At2g42750.1 68415.m05294 DNAJ heat shock N-terminal domain-conta... 25 4.6
At1g29950.2 68414.m03661 expressed protein 25 4.6
At1g29950.1 68414.m03660 expressed protein 25 4.6
At4g14890.1 68417.m02287 ferredoxin family protein similar to SP... 25 6.0
At5g44210.1 68418.m05409 ERF domain protein 9 (ERF9) identical t... 25 8.0
At5g14970.1 68418.m01756 expressed protein 25 8.0
>At2g36270.1 68415.m04452 bZIP transcription factor family protein /
ABA-responsive element-binding protein, putative similar
to ABA-responsive element binding protein 1 (AREB1)
GI:9967417 from [Arabidopsis thaliana]; contains a bZIP
transcription factor basic domain signature (PDOC00036)
Length = 442
Score = 29.1 bits (62), Expect = 0.37
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 2 DIWND--RGISAGEGGDGEDLSVTTTVDYSNVTGTTESVGQPYFDNSTKRDYTAAVG 56
++W++ RG +G GGD S ++ + G + QP F T D+ G
Sbjct: 159 EVWSEIHRGGGSGNGGDSNGRSSSSNGQNNAQNGGETAARQPTFGEMTLEDFLVKAG 215
>At5g47490.1 68418.m05864 expressed protein
Length = 1361
Score = 28.7 bits (61), Expect = 0.49
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 16 DGEDLSVTTTVDYSNVTGTTESVGQPYFDNSTKRDYTAAVGQPAYLHCRVKNLADRAAQG 75
DG D S+ + Y N T E+V D + +R TA+ + N + + G
Sbjct: 250 DGHDASMNSQESYENSTSNWENVAANNSDVAYQRQSTASAVAGTVENVSTWNQVSQVSNG 309
Query: 76 FP 77
+P
Sbjct: 310 YP 311
>At5g47480.1 68418.m05863 expressed protein
Length = 1350
Score = 27.1 bits (57), Expect = 1.5
Identities = 16/62 (25%), Positives = 24/62 (38%)
Query: 16 DGEDLSVTTTVDYSNVTGTTESVGQPYFDNSTKRDYTAAVGQPAYLHCRVKNLADRAAQG 75
DG+D +V + Y N TG ESV D + + T + N + G
Sbjct: 255 DGQDATVNSQESYINSTGNWESVAADNSDVAYLKQSTTSAMAGTAESVSTWNQVSQVGNG 314
Query: 76 FP 77
+P
Sbjct: 315 YP 316
>At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transporter,
putative similar to multidrug-resistant protein CjMDR1
[Coptis japonica] GI:14715462, MDR-like p-glycoprotein
[Arabidopsis thaliana] GI:24324262; contains Pfam
profiles PF00005: ABC transporter, PF00664: ABC
transporter transmembrane region
Length = 1286
Score = 26.2 bits (55), Expect = 2.6
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 9 ISAGEGGDGEDLSVTTTVDYSNVTGTTESVGQPYFDNSTKRDYTAAVGQ 57
I+ G+GGD + + ++ + SN G + Q Y +R + GQ
Sbjct: 1138 IAYGKGGDASESEIVSSAELSNAHGFISGLQQGYDTMVGERGIQLSGGQ 1186
>At3g62150.1 68416.m06983 multidrug resistant (MDR) ABC transporter,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]; contains Pfam
profiles PF00005: ABC transporter, PF00664: ABC
transporter transmembrane region
Length = 1292
Score = 25.8 bits (54), Expect = 3.5
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 9 ISAGEGGDGEDLSVTTTVDYSNVTGTTESVGQPYFDNSTKRDYTAAVGQ 57
I+ G+GGD + + + + SN G + Q Y +R + GQ
Sbjct: 1144 IAYGKGGDATETEIVSAAELSNAHGFISGLQQGYDTMVGERGVQLSGGQ 1192
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 25.8 bits (54), Expect = 3.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 2 DIWNDRGISAGEGGDGEDLSVTTTVDYSNVTGTTESV 38
DI +GI G +G+D +T V +N+ G + S+
Sbjct: 679 DINKRKGIIVGNDQEGDDSVITANVPLNNMFGYSTSL 715
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 25.8 bits (54), Expect = 3.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 2 DIWNDRGISAGEGGDGEDLSVTTTVDYSNVTGTTESV 38
DI +GI G +G+D +T V +N+ G + S+
Sbjct: 679 DINKRKGIIVGNDQEGDDSVITANVPLNNMFGYSTSL 715
>At2g44340.1 68415.m05515 VQ motif-containing protein contains
PF05678: VQ motif
Length = 188
Score = 25.4 bits (53), Expect = 4.6
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 13 EGGDGEDLSVTTTVDYSNVTGTTESVGQPYFDNSTKRDYTAA 54
E G G D S + T Y ++ G + VG+ YF + R +++
Sbjct: 113 EWGSG-DQSTSNTNTYFDLEGLIQDVGEDYFSSFPMRSSSSS 153
>At2g44140.1 68415.m05490 autophagy 4a (APG4a) identical to
autophagy 4a [Arabidopsis thaliana]
gi|19912143|dbj|BAB88383
Length = 467
Score = 25.4 bits (53), Expect = 4.6
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 5 NDRGISAGEGGDGEDLSVTTTVDYSNVTGTTESVGQPYFDNST 47
+D+ + G ++ S T +SNV ++ SV QPY ++ST
Sbjct: 22 HDKSPLVSDSGPSDNKSKFTL--WSNVFTSSSSVSQPYRESST 62
>At2g42750.1 68415.m05294 DNAJ heat shock N-terminal
domain-containing protein low similarity to GFA2
[Arabidopsis thaliana] GI:21429604; contains Pfam
profile PF00226: DnaJ domain
Length = 344
Score = 25.4 bits (53), Expect = 4.6
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 28 YSNVTGTTESVGQPYFDNSTKRDYTAAVGQPAYLHCRVKNLADRAAQGF 76
Y + G T + P+ D+ST RD+ V + A + C KN A+ A F
Sbjct: 137 YDEIHGYTVTAINPFLDDSTPRDH-VFVDEFACIGC--KNCANVAPDIF 182
>At1g29950.2 68414.m03661 expressed protein
Length = 251
Score = 25.4 bits (53), Expect = 4.6
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 5 NDRGISAGEGGDGEDLSV--TTTVDYSNVTGTTESVGQPYFDNS 46
ND +GGD E++S T++ DY N T + Y +N+
Sbjct: 133 NDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNN 176
>At1g29950.1 68414.m03660 expressed protein
Length = 251
Score = 25.4 bits (53), Expect = 4.6
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 5 NDRGISAGEGGDGEDLSV--TTTVDYSNVTGTTESVGQPYFDNS 46
ND +GGD E++S T++ DY N T + Y +N+
Sbjct: 133 NDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNN 176
>At4g14890.1 68417.m02287 ferredoxin family protein similar to
SP|P00252 Ferredoxin I from Nostoc muscorum, SP|P00248
Ferredoxin from Mastigocladus laminosus, SP|P00244
Ferredoxin I from Aphanizomenon flos-aquae; contains
Pfam profile PF00111 2Fe-2S iron-sulfur cluster binding
domain
Length = 154
Score = 25.0 bits (52), Expect = 6.0
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 19 DLSVTTTVDYSNVTGTTESVGQPYFDNSTKRDYTAAVGQPAYLHCRVKNLAD 70
+L V T VTGT + G D+ +R YT C +K + +
Sbjct: 90 NLGVCMTCPAKLVTGTVDQSGGMLSDDVVERGYTLLCASYPTSDCHIKMIPE 141
>At5g44210.1 68418.m05409 ERF domain protein 9 (ERF9) identical to
ERF domain protein 9 GI:11414988 from [Arabidopsis
thaliana]
Length = 200
Score = 24.6 bits (51), Expect = 8.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 5 NDRGISAGEGGDGEDLSVTT 24
N R I+ EGG G+ +++TT
Sbjct: 7 NGRSIAVSEGGGGKTMTMTT 26
>At5g14970.1 68418.m01756 expressed protein
Length = 355
Score = 24.6 bits (51), Expect = 8.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 8 GISAGEGGDGEDLSVTTTVDY 28
GI EGGDG V T+ DY
Sbjct: 304 GIRTTEGGDGTGRKVDTSRDY 324
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.131 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,898,294
Number of Sequences: 28952
Number of extensions: 66410
Number of successful extensions: 121
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 111
Number of HSP's gapped (non-prelim): 15
length of query: 77
length of database: 12,070,560
effective HSP length: 57
effective length of query: 20
effective length of database: 10,420,296
effective search space: 208405920
effective search space used: 208405920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 51 (24.6 bits)
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