GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001451-TA|BGIBMGA001451-PA|undefined
         (84 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          22   0.91 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   1.2  

>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 22.2 bits (45), Expect = 0.91
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 58  KILYQTGASGRSSERITKV 76
           K+  + GASGR   +ITK+
Sbjct: 94  KVRKRAGASGRREAKITKM 112


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 1.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)

Query: 19  VIRTPLEAFRPSAEIHI 35
           +IRTP EA   S E HI
Sbjct: 147 IIRTPTEASWHSPEAHI 163


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.134    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,875
Number of Sequences: 429
Number of extensions: 411
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 84
length of database: 140,377
effective HSP length: 47
effective length of query: 37
effective length of database: 120,214
effective search space:  4447918
effective search space used:  4447918
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.2 bits)
S2: 37 (19.0 bits)