Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001450-TA|BGIBMGA001450-PA|IPR004182|GRAM
(374 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107480-1|AAI07481.1| 738|Homo sapiens GRAMD1B protein protein. 115 2e-25
BC105932-1|AAI05933.1| 738|Homo sapiens GRAMD1B protein protein. 115 2e-25
BC105931-1|AAI05932.1| 738|Homo sapiens GRAMD1B protein protein. 115 2e-25
BC105741-1|AAI05742.1| 738|Homo sapiens GRAMD1B protein protein. 115 2e-25
AB033027-1|BAA86515.1| 761|Homo sapiens KIAA1201 protein protein. 115 2e-25
AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens ... 104 6e-22
BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing ... 103 1e-21
AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein. 103 1e-21
BC008590-1|AAH08590.1| 432|Homo sapiens GRAM domain containing ... 99 1e-20
AY116970-1|AAM77213.1| 432|Homo sapiens HCV NS3-transactivated ... 99 1e-20
AK024966-1|BAB15045.1| 432|Homo sapiens protein ( Homo sapiens ... 99 1e-20
BC035040-1|AAH35040.1| 662|Homo sapiens GRAM domain containing ... 97 7e-20
BC038451-1|AAH38451.1| 353|Homo sapiens GRAMD2 protein protein. 93 1e-18
AB020689-1|BAA74905.2| 1291|Homo sapiens KIAA0882 protein protein. 66 1e-10
AK127020-1|BAC86789.1| 1015|Homo sapiens protein ( Homo sapiens ... 64 8e-10
BC129994-1|AAI29995.1| 1232|Homo sapiens TBC1 domain family, mem... 63 1e-09
AB014576-1|BAA31651.1| 1262|Homo sapiens KIAA0676 protein protein. 63 1e-09
BC122564-1|AAI22565.1| 632|Homo sapiens TBC1 domain family, mem... 63 2e-09
AL591849-3|CAI40161.1| 1178|Homo sapiens novel protein protein. 63 2e-09
AL391315-4|CAI39548.1| 1178|Homo sapiens novel protein protein. 63 2e-09
AK123957-1|BAC85735.1| 632|Homo sapiens protein ( Homo sapiens ... 63 2e-09
CR456470-1|CAG30356.1| 578|Homo sapiens dJ439F8.1 protein. 37 0.10
BC129837-1|AAI29838.1| 578|Homo sapiens death-inducing-protein ... 37 0.10
BC080189-1|AAH80189.1| 101|Homo sapiens DIP protein protein. 37 0.10
AL096766-2|CAI18820.1| 578|Homo sapiens protein ( Human DNA seq... 37 0.10
AL021392-1|CAI20966.1| 578|Homo sapiens protein ( Human DNA seq... 37 0.10
AB018310-1|BAA34487.2| 598|Homo sapiens KIAA0767 protein protein. 37 0.10
AC016738-3|AAY14824.1| 897|Homo sapiens unknown protein. 36 0.18
AB024057-1|BAA75489.1| 897|Homo sapiens vascular Rab-GAP/TBC-co... 36 0.18
AB017114-1|BAA76517.1| 733|Homo sapiens AD 3 protein. 36 0.18
>BC107480-1|AAI07481.1| 738|Homo sapiens GRAMD1B protein protein.
Length = 738
Score = 115 bits (277), Expect = 2e-25
Identities = 55/131 (41%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
Query: 52 KARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYVTKLLI 111
K R + F++ F Q+ E+++ YSCAL D+LLQG LY+++N+ FYSN+F + T L +
Sbjct: 92 KQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTV 151
Query: 112 PTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLMMHVWKTARTPELAVP 171
+ +TKEK AR+IPNA+ VCT E+H F S +RD TY +M +W+ A + P
Sbjct: 152 RLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCP 211
Query: 172 KAQLYGNVVRC 182
K +L+ V +C
Sbjct: 212 K-ELWHFVHQC 221
>BC105932-1|AAI05933.1| 738|Homo sapiens GRAMD1B protein protein.
Length = 738
Score = 115 bits (277), Expect = 2e-25
Identities = 55/131 (41%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
Query: 52 KARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYVTKLLI 111
K R + F++ F Q+ E+++ YSCAL D+LLQG LY+++N+ FYSN+F + T L +
Sbjct: 92 KQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTV 151
Query: 112 PTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLMMHVWKTARTPELAVP 171
+ +TKEK AR+IPNA+ VCT E+H F S +RD TY +M +W+ A + P
Sbjct: 152 RLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCP 211
Query: 172 KAQLYGNVVRC 182
K +L+ V +C
Sbjct: 212 K-ELWHFVHQC 221
>BC105931-1|AAI05932.1| 738|Homo sapiens GRAMD1B protein protein.
Length = 738
Score = 115 bits (277), Expect = 2e-25
Identities = 55/131 (41%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
Query: 52 KARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYVTKLLI 111
K R + F++ F Q+ E+++ YSCAL D+LLQG LY+++N+ FYSN+F + T L +
Sbjct: 92 KQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTV 151
Query: 112 PTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLMMHVWKTARTPELAVP 171
+ +TKEK AR+IPNA+ VCT E+H F S +RD TY +M +W+ A + P
Sbjct: 152 RLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCP 211
Query: 172 KAQLYGNVVRC 182
K +L+ V +C
Sbjct: 212 K-ELWHFVHQC 221
>BC105741-1|AAI05742.1| 738|Homo sapiens GRAMD1B protein protein.
Length = 738
Score = 115 bits (277), Expect = 2e-25
Identities = 55/131 (41%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
Query: 52 KARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYVTKLLI 111
K R + F++ F Q+ E+++ YSCAL D+LLQG LY+++N+ FYSN+F + T L +
Sbjct: 92 KQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTV 151
Query: 112 PTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLMMHVWKTARTPELAVP 171
+ +TKEK AR+IPNA+ VCT E+H F S +RD TY +M +W+ A + P
Sbjct: 152 RLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCP 211
Query: 172 KAQLYGNVVRC 182
K +L+ V +C
Sbjct: 212 K-ELWHFVHQC 221
>AB033027-1|BAA86515.1| 761|Homo sapiens KIAA1201 protein protein.
Length = 761
Score = 115 bits (277), Expect = 2e-25
Identities = 55/131 (41%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
Query: 52 KARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYVTKLLI 111
K R + F++ F Q+ E+++ YSCAL D+LLQG LY+++N+ FYSN+F + T L +
Sbjct: 115 KQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTV 174
Query: 112 PTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLMMHVWKTARTPELAVP 171
+ +TKEK AR+IPNA+ VCT E+H F S +RD TY +M +W+ A + P
Sbjct: 175 RLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCP 234
Query: 172 KAQLYGNVVRC 182
K +L+ V +C
Sbjct: 235 K-ELWHFVHQC 244
>AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens
cDNA FLJ90433 fis, clone NT2RP3000721. ).
Length = 713
Score = 104 bits (249), Expect = 6e-22
Identities = 54/159 (33%), Positives = 90/159 (56%), Gaps = 2/159 (1%)
Query: 25 GSAPSV-RVSALGSVSGNDETKDSKQPSKARQKKFQRHFPQVGPEEKVLNYYSCALVGDL 83
G P +LGS + +K K R + F++ F ++ E+++ YSCAL ++
Sbjct: 52 GGVPGTPSTQSLGSRNFIRNSKMLSPTYKQRNEDFRKLFSKLPEAERLIVDYSCALQREI 111
Query: 84 LLQGHLYITKNYFAFYSNVFGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERHVF 143
LLQG LY+++N+ FYSN+F + T + I V + KEK A++IPNA+ +CT E+H F
Sbjct: 112 LLQGRLYLSENWICFYSNIFRWETTISIQLKEVTCLKKEKTAKLIPNAIQICTESEKHFF 171
Query: 144 GSLLSRDSTYKLMMHVWKTARTPELAVPKAQLYGNVVRC 182
S +RD + L+ +W+ A + P+ +L+ V +C
Sbjct: 172 TSFGARDRCFLLIFRLWQNALLEKTLSPR-ELWHLVHQC 209
>BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing 1A
protein.
Length = 724
Score = 103 bits (246), Expect = 1e-21
Identities = 48/131 (36%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Query: 52 KARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYVTKLLI 111
K R + F++ F ++ E+++ YSCAL ++LLQG LY+++N+ FYSN+F + T + I
Sbjct: 87 KQRNEDFRKLFSKLPEAERLIVDYSCALQREILLQGRLYLSENWICFYSNIFRWETTISI 146
Query: 112 PTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLMMHVWKTARTPELAVP 171
V + KEK A++IPNA+ +CT E+H F S +RD + L+ +W+ A + P
Sbjct: 147 QLKEVTCLKKEKTAKLIPNAIQICTESEKHFFTSFGARDRCFLLIFRLWQNALLEKTLSP 206
Query: 172 KAQLYGNVVRC 182
+ +L+ V +C
Sbjct: 207 R-ELWHLVHQC 216
>AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein.
Length = 651
Score = 103 bits (246), Expect = 1e-21
Identities = 48/131 (36%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Query: 52 KARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYVTKLLI 111
K R + F++ F ++ E+++ YSCAL ++LLQG LY+++N+ FYSN+F + T + I
Sbjct: 17 KQRNEDFRKLFSKLPEAERLIVDYSCALQREILLQGRLYLSENWICFYSNIFRWETTISI 76
Query: 112 PTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLMMHVWKTARTPELAVP 171
V + KEK A++IPNA+ +CT E+H F S +RD + L+ +W+ A + P
Sbjct: 77 QLKEVTCLKKEKTAKLIPNAIQICTESEKHFFTSFGARDRCFLLIFRLWQNALLEKTLSP 136
Query: 172 KAQLYGNVVRC 182
+ +L+ V +C
Sbjct: 137 R-ELWHLVHQC 146
>BC008590-1|AAH08590.1| 432|Homo sapiens GRAM domain containing 3
protein.
Length = 432
Score = 99 bits (238), Expect = 1e-20
Identities = 53/125 (42%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 39 SGNDETKDSKQPSKARQKKFQRHFPQ----VGPEEKVLNYYSCALVGDLLLQGHLYITKN 94
S ND + K+ S + Q K HF + V EE + ++CAL ++L QG L++++N
Sbjct: 89 SKNDPKTERKKSSSSSQYKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSEN 148
Query: 95 YFAFYSNVFGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYK 154
+ F+S VFG TK+ IP SV I K K A ++PNA+ + T +R++F SLLSRDSTYK
Sbjct: 149 WICFHSKVFGKDTKISIPAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYK 208
Query: 155 LMMHV 159
L+ V
Sbjct: 209 LLKSV 213
>AY116970-1|AAM77213.1| 432|Homo sapiens HCV NS3-transactivated
protein 2 protein.
Length = 432
Score = 99 bits (238), Expect = 1e-20
Identities = 53/125 (42%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 39 SGNDETKDSKQPSKARQKKFQRHFPQ----VGPEEKVLNYYSCALVGDLLLQGHLYITKN 94
S ND + K+ S + Q K HF + V EE + ++CAL ++L QG L++++N
Sbjct: 89 SKNDPKTERKKSSSSSQYKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSEN 148
Query: 95 YFAFYSNVFGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYK 154
+ F+S VFG TK+ IP SV I K K A ++PNA+ + T +R++F SLLSRDSTYK
Sbjct: 149 WICFHSKVFGKDTKISIPAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYK 208
Query: 155 LMMHV 159
L+ V
Sbjct: 209 LLKSV 213
>AK024966-1|BAB15045.1| 432|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21313 fis, clone COL02176. ).
Length = 432
Score = 99 bits (238), Expect = 1e-20
Identities = 53/125 (42%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 39 SGNDETKDSKQPSKARQKKFQRHFPQ----VGPEEKVLNYYSCALVGDLLLQGHLYITKN 94
S ND + K+ S + Q K HF + V EE + ++CAL ++L QG L++++N
Sbjct: 89 SKNDPKTERKKSSSSSQYKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSEN 148
Query: 95 YFAFYSNVFGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYK 154
+ F+S VFG TK+ IP SV I K K A ++PNA+ + T +R++F SLLSRDSTYK
Sbjct: 149 WICFHSKVFGKDTKISIPAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYK 208
Query: 155 LMMHV 159
L+ V
Sbjct: 209 LLKSV 213
>BC035040-1|AAH35040.1| 662|Homo sapiens GRAM domain containing 1C
protein.
Length = 662
Score = 97.5 bits (232), Expect = 7e-20
Identities = 43/115 (37%), Positives = 72/115 (62%)
Query: 47 SKQPSKARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYV 106
S K R ++++R F + E+++ Y+CAL D+LLQG LY+++N+ FYSN+F +
Sbjct: 60 SSSTYKDRNEEYRRQFTHLPDTERLIADYACALQRDILLQGRLYLSENWLCFYSNIFRWE 119
Query: 107 TKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLMMHVWK 161
T + I ++ +TKEK AR+IPNA+ + T E+ F S +RD +Y + +W+
Sbjct: 120 TTISIALKNITFMTKEKTARLIPNAIQIVTESEKFFFTSFGARDRSYLSIFRLWQ 174
>BC038451-1|AAH38451.1| 353|Homo sapiens GRAMD2 protein protein.
Length = 353
Score = 93.1 bits (221), Expect = 1e-18
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Query: 56 KKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYVTKLLIPTTS 115
+++ + F V EE VL SCAL D LLQG LYI+ N+ F++++FG K++IP S
Sbjct: 71 QQYHKLFKDVPLEEVVLKVCSCALQRDFLLQGRLYISPNWLCFHASLFGKDIKVVIPVVS 130
Query: 116 VLRITKEKVARIIPNAVGVCTR-DERHVFGSLLSRDSTYKLMMHV 159
V I K K+AR++PN + + T ++++F SLLSRDS Y L+ V
Sbjct: 131 VQMIKKHKMARLLPNGLAITTNTSQKYIFVSLLSRDSVYDLLRRV 175
>AB020689-1|BAA74905.2| 1291|Homo sapiens KIAA0882 protein protein.
Length = 1291
Score = 66.5 bits (155), Expect = 1e-10
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 46 DSKQPSKARQKKFQRHFPQVGPEEKVLNYYSCAL-VGDLLLQGHLYITKNYFAFYSNVFG 104
D + K KF R F + EEK++NYYSC+ G + QG +Y++ N+ FYS + G
Sbjct: 161 DDTEKFKEAIVKFHRLFG-MPEEEKLVNYYSCSYWKGKVPRQGWMYLSINHLCFYSFLMG 219
Query: 105 YVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLM 156
KL+I + ++ K ++P+ + V TR H F L+ + T+KLM
Sbjct: 220 REAKLVIRWVDITQLEK-NATLLLPDVIKVSTRSSEHFFSVFLNINETFKLM 270
Score = 36.7 bits (81), Expect = 0.13
Identities = 23/104 (22%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 51 SKARQKKFQRHFPQVGPEEKVLNYYSCAL---VGDLLLQGHLYITKNYFAFYSNVFGYVT 107
++A+ ++++ F ++ +EK+ + C L + + G ++++ NY F S +
Sbjct: 313 ARAKSERYRALF-RLPKDEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEEN-LC 370
Query: 108 KLLIPTTSVLRITKEKVARIIPNAVGVCTRDE-RHVFGSLLSRD 150
L+IP V + K + ++P+ + + TR+ +F +L RD
Sbjct: 371 SLIIPLREVTIVEKADSSSVLPSPLSISTRNRMTFLFANLKDRD 414
>AK127020-1|BAC86789.1| 1015|Homo sapiens protein ( Homo sapiens
cDNA FLJ45076 fis, clone BRAWH3027574, weakly similar
to Homo sapiens vascular Rab-GAP/TBC-containing (VRP).
).
Length = 1015
Score = 64.1 bits (149), Expect = 8e-10
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 68 EEKVLNYYSCAL-VGDLLLQGHLYITKNYFAFYSNVFGYVTKLLIPTTSVLRITKEKVAR 126
EEK++NYYSC+ G + QG +Y++ N+ FYS + G KL+I + ++ K
Sbjct: 4 EEKLVNYYSCSYWKGKVPRQGWMYLSINHLCFYSFLMGREAKLVIRWVDITQLEK-NATL 62
Query: 127 IIPNAVGVCTRDERHVFGSLLSRDSTYKLM 156
++P+ + V TR H F L+ + T+KLM
Sbjct: 63 LLPDVIKVSTRSSEHFFSVFLNINETFKLM 92
Score = 36.7 bits (81), Expect = 0.13
Identities = 23/104 (22%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 51 SKARQKKFQRHFPQVGPEEKVLNYYSCAL---VGDLLLQGHLYITKNYFAFYSNVFGYVT 107
++A+ ++++ F ++ +EK+ + C L + + G ++++ NY F S +
Sbjct: 135 ARAKSERYRALF-RLPKDEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEEN-LC 192
Query: 108 KLLIPTTSVLRITKEKVARIIPNAVGVCTRDE-RHVFGSLLSRD 150
L+IP V + K + ++P+ + + TR+ +F +L RD
Sbjct: 193 SLIIPLREVTIVEKADSSSVLPSPLSISTRNRMTFLFANLKDRD 236
>BC129994-1|AAI29995.1| 1232|Homo sapiens TBC1 domain family, member
9B (with GRAM domain) protein.
Length = 1232
Score = 63.3 bits (147), Expect = 1e-09
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 41 NDETKDSKQPSKARQKKFQRHFPQVGPE-EKVLNYYSCAL-VGDLLLQGHLYITKNYFAF 98
N + + + P K ++ + + PE EK++NYYSC+ G + QG LY+T N+ F
Sbjct: 125 NLQPQGDEDPGKFKEAELKMRKQFGMPEGEKLVNYYSCSYWKGRVPRQGWLYLTVNHLCF 184
Query: 99 YSNVFGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLM 156
YS + G L++ + R+ K + P ++ V TRD+ F L+ T+KLM
Sbjct: 185 YSFLLGKEVSLVVQWVDITRLEK-NATLLFPESIRVDTRDQELFFSMFLNIGETFKLM 241
Score = 34.7 bits (76), Expect = 0.54
Identities = 24/104 (23%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 51 SKARQKKFQRHFPQVGPEEKVLNYYSCAL---VGDLLLQGHLYITKNYFAFYSNVFGYVT 107
++A+ + ++ F ++ +E++ + SC L L + G ++I+ NY F S
Sbjct: 283 ARAKNECYRATF-RLPRDERLDGHTSCTLWTPFNKLHIPGQMFISNNYICFASKEED-AC 340
Query: 108 KLLIPTTSVLRITKEKVARIIPNAVGVCTRDE-RHVFGSLLSRD 150
L+IP V + K + ++P+ + + T+ + +F +L RD
Sbjct: 341 HLIIPLREVTIVEKADSSSVLPSPLSISTKSKMTFLFANLKDRD 384
>AB014576-1|BAA31651.1| 1262|Homo sapiens KIAA0676 protein protein.
Length = 1262
Score = 63.3 bits (147), Expect = 1e-09
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 41 NDETKDSKQPSKARQKKFQRHFPQVGPE-EKVLNYYSCAL-VGDLLLQGHLYITKNYFAF 98
N + + + P K ++ + + PE EK++NYYSC+ G + QG LY+T N+ F
Sbjct: 137 NLQPQGDEDPGKFKEAELKMRKQFGMPEGEKLVNYYSCSYWKGRVPRQGWLYLTVNHLCF 196
Query: 99 YSNVFGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLM 156
YS + G L++ + R+ K + P ++ V TRD+ F L+ T+KLM
Sbjct: 197 YSFLLGKEVSLVVQWVDITRLEK-NATLLFPESIRVDTRDQELFFSMFLNIGETFKLM 253
Score = 34.7 bits (76), Expect = 0.54
Identities = 24/104 (23%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 51 SKARQKKFQRHFPQVGPEEKVLNYYSCAL---VGDLLLQGHLYITKNYFAFYSNVFGYVT 107
++A+ + ++ F ++ +E++ + SC L L + G ++I+ NY F S
Sbjct: 295 ARAKNECYRATF-RLPRDERLDGHTSCTLWTPFNKLHIPGQMFISNNYICFASKEED-AC 352
Query: 108 KLLIPTTSVLRITKEKVARIIPNAVGVCTRDE-RHVFGSLLSRD 150
L+IP V + K + ++P+ + + T+ + +F +L RD
Sbjct: 353 HLIIPLREVTIVEKADSSSVLPSPLSISTKSKMTFLFANLKDRD 396
>BC122564-1|AAI22565.1| 632|Homo sapiens TBC1 domain family, member
8B (with GRAM domain) protein.
Length = 632
Score = 62.9 bits (146), Expect = 2e-09
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 50 PSKARQK--KFQRHFPQVGPEEKVLNYYSCAL-VGDLLLQGHLYITKNYFAFYSNVFGYV 106
P K R+ KF++ F + +EK++ YYSC+ G + QG LY++ N+ +FYS + G
Sbjct: 137 PEKFREALLKFEKCFG-LPEKEKLVTYYSCSYWKGRVPCQGWLYLSTNFLSFYSFLLGSE 195
Query: 107 TKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLM 156
KL+I V ++ K I+ ++ VC++ E H F L + TY LM
Sbjct: 196 IKLIISWDEVSKLEKTSNV-ILTESIHVCSQGENHYFSMFLHINQTYLLM 244
>AL591849-3|CAI40161.1| 1178|Homo sapiens novel protein protein.
Length = 1178
Score = 62.9 bits (146), Expect = 2e-09
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 50 PSKARQK--KFQRHFPQVGPEEKVLNYYSCAL-VGDLLLQGHLYITKNYFAFYSNVFGYV 106
P K R+ KF++ F + +EK++ YYSC+ G + QG LY++ N+ +FYS + G
Sbjct: 195 PEKFREALLKFEKCFG-LPEKEKLVTYYSCSYWKGRVPCQGWLYLSTNFLSFYSFLLGSE 253
Query: 107 TKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLM 156
KL+I V ++ K I+ ++ VC++ E H F L + TY LM
Sbjct: 254 IKLIISWDEVSKLEKTSNV-ILTESIHVCSQGENHYFSMFLHINQTYLLM 302
>AL391315-4|CAI39548.1| 1178|Homo sapiens novel protein protein.
Length = 1178
Score = 62.9 bits (146), Expect = 2e-09
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 50 PSKARQK--KFQRHFPQVGPEEKVLNYYSCAL-VGDLLLQGHLYITKNYFAFYSNVFGYV 106
P K R+ KF++ F + +EK++ YYSC+ G + QG LY++ N+ +FYS + G
Sbjct: 195 PEKFREALLKFEKCFG-LPEKEKLVTYYSCSYWKGRVPCQGWLYLSTNFLSFYSFLLGSE 253
Query: 107 TKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLM 156
KL+I V ++ K I+ ++ VC++ E H F L + TY LM
Sbjct: 254 IKLIISWDEVSKLEKTSNV-ILTESIHVCSQGENHYFSMFLHINQTYLLM 302
>AK123957-1|BAC85735.1| 632|Homo sapiens protein ( Homo sapiens
cDNA FLJ41963 fis, clone PUAEN2006328, moderately
similar to Homo sapiens TBC1 domain family, member 8
(with GRAM ).
Length = 632
Score = 62.9 bits (146), Expect = 2e-09
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 50 PSKARQK--KFQRHFPQVGPEEKVLNYYSCAL-VGDLLLQGHLYITKNYFAFYSNVFGYV 106
P K R+ KF++ F + +EK++ YYSC+ G + QG LY++ N+ +FYS + G
Sbjct: 137 PEKFREALLKFEKCFG-LPEKEKLVTYYSCSYWKGRVPCQGWLYLSTNFLSFYSFLLGSE 195
Query: 107 TKLLIPTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLM 156
KL+I V ++ K I+ ++ VC++ E H F L + TY LM
Sbjct: 196 IKLIISWDEVSKLEKTSNV-ILTESIHVCSQGENHYFSMFLHINQTYLLM 244
>CR456470-1|CAG30356.1| 578|Homo sapiens dJ439F8.1 protein.
Length = 578
Score = 37.1 bits (82), Expect = 0.10
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 82 DLLLQGHLYITKNYFAFYSNVFGYVTK-LLIPTTSVLRITKEKVARIIPN-----AVGVC 135
D + G LY+T+NY F S+ G + +I + I K KV ++P AV
Sbjct: 481 DYIRNGVLYVTENYLCFESSKSGSSKRNKVIKLVDITDIQKYKVLSVLPGSGMGIAVSTP 540
Query: 136 TRDERHVFGSLLSRDSTYKLMM 157
+ + VFG+++ RD ++ ++
Sbjct: 541 STQKPLVFGAMVHRDEAFETIL 562
>BC129837-1|AAI29838.1| 578|Homo sapiens death-inducing-protein
protein.
Length = 578
Score = 37.1 bits (82), Expect = 0.10
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 82 DLLLQGHLYITKNYFAFYSNVFGYVTK-LLIPTTSVLRITKEKVARIIPN-----AVGVC 135
D + G LY+T+NY F S+ G + +I + I K KV ++P AV
Sbjct: 481 DYIRNGVLYVTENYLCFESSKSGSSKRNKVIKLVDITDIQKYKVLSVLPGSGMGIAVSTP 540
Query: 136 TRDERHVFGSLLSRDSTYKLMM 157
+ + VFG+++ RD ++ ++
Sbjct: 541 STQKPLVFGAMVHRDEAFETIL 562
>BC080189-1|AAH80189.1| 101|Homo sapiens DIP protein protein.
Length = 101
Score = 37.1 bits (82), Expect = 0.10
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 82 DLLLQGHLYITKNYFAFYSNVFGYVTK-LLIPTTSVLRITKEKVARIIPN-----AVGVC 135
D + G LY+T+NY F S+ G + +I + I K KV ++P AV
Sbjct: 4 DYIRNGVLYVTENYLCFESSKSGSSKRNKVIKLVDITDIQKYKVLSVLPGSGMGIAVSTP 63
Query: 136 TRDERHVFGSLLSRDSTYKLMM 157
+ + VFG+++ RD ++ ++
Sbjct: 64 STQKPLVFGAMVHRDEAFETIL 85
>AL096766-2|CAI18820.1| 578|Homo sapiens protein ( Human DNA
sequence from clone RP6-59H18 on chromosome 22. ).
Length = 578
Score = 37.1 bits (82), Expect = 0.10
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 82 DLLLQGHLYITKNYFAFYSNVFGYVTK-LLIPTTSVLRITKEKVARIIPN-----AVGVC 135
D + G LY+T+NY F S+ G + +I + I K KV ++P AV
Sbjct: 481 DYIRNGVLYVTENYLCFESSKSGSSKRNKVIKLVDITDIQKYKVLSVLPGSGMGIAVSTP 540
Query: 136 TRDERHVFGSLLSRDSTYKLMM 157
+ + VFG+++ RD ++ ++
Sbjct: 541 STQKPLVFGAMVHRDEAFETIL 562
>AL021392-1|CAI20966.1| 578|Homo sapiens protein ( Human DNA
sequence from clone RP3-439F8 on chromosome 22q13.31-33.
).
Length = 578
Score = 37.1 bits (82), Expect = 0.10
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 82 DLLLQGHLYITKNYFAFYSNVFGYVTK-LLIPTTSVLRITKEKVARIIPN-----AVGVC 135
D + G LY+T+NY F S+ G + +I + I K KV ++P AV
Sbjct: 481 DYIRNGVLYVTENYLCFESSKSGSSKRNKVIKLVDITDIQKYKVLSVLPGSGMGIAVSTP 540
Query: 136 TRDERHVFGSLLSRDSTYKLMM 157
+ + VFG+++ RD ++ ++
Sbjct: 541 STQKPLVFGAMVHRDEAFETIL 562
>AB018310-1|BAA34487.2| 598|Homo sapiens KIAA0767 protein protein.
Length = 598
Score = 37.1 bits (82), Expect = 0.10
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 82 DLLLQGHLYITKNYFAFYSNVFGYVTK-LLIPTTSVLRITKEKVARIIPN-----AVGVC 135
D + G LY+T+NY F S+ G + +I + I K KV ++P AV
Sbjct: 501 DYIRNGVLYVTENYLCFESSKSGSSKRNKVIKLVDITDIQKYKVLSVLPGSGMGIAVSTP 560
Query: 136 TRDERHVFGSLLSRDSTYKLMM 157
+ + VFG+++ RD ++ ++
Sbjct: 561 STQKPLVFGAMVHRDEAFETIL 582
>AC016738-3|AAY14824.1| 897|Homo sapiens unknown protein.
Length = 897
Score = 36.3 bits (80), Expect = 0.18
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 13/200 (6%)
Query: 47 SKQPSKAR-QKKFQRHFPQVGPEEKVLNYYSCAL---VGDLLLQGHLYITKNYFAFYSNV 102
+K+ +AR Q +F R F ++ +EK+ C+L G ++ + +Y F S
Sbjct: 31 TKRDLEARAQNEFFRAFFRLPRKEKLHAVVDCSLWTPFSRCHTTGRMFASDSYICFASRE 90
Query: 103 FGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDE-RHVFGSLLSRDSTYKLMMHVWK 161
G K+++P V+ I K + ++P+ + V R + F L RDS + ++
Sbjct: 91 DG-CCKIILPLREVVSIEKMEDTSLLPHPIIVSIRSKVAFQFIELRDRDSLVEALL---- 145
Query: 162 TARTPELAVPKAQLYGNVVRCCPQLVVSSFHDTLLLKDPRASEVDFEASEYSPEDDSSSA 221
AR ++ Y + FH T + D R +++ +S+ S E + +
Sbjct: 146 -ARLKQVHANHPVHYD--TSADDDMASLVFHSTSMCSDHRFGDLEMMSSQNSEESEKEKS 202
Query: 222 GGDQVDAPAAVRRESETILP 241
DA ++S + P
Sbjct: 203 PLMHPDALVTAFQQSGSQSP 222
>AB024057-1|BAA75489.1| 897|Homo sapiens vascular
Rab-GAP/TBC-containing protein protein.
Length = 897
Score = 36.3 bits (80), Expect = 0.18
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 13/200 (6%)
Query: 47 SKQPSKAR-QKKFQRHFPQVGPEEKVLNYYSCAL---VGDLLLQGHLYITKNYFAFYSNV 102
+K+ +AR Q +F R F ++ +EK+ C+L G ++ + +Y F S
Sbjct: 31 TKRDLEARAQNEFFRAFFRLPRKEKLHAVVDCSLWTPFSRCHTAGRMFASDSYICFASRE 90
Query: 103 FGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDE-RHVFGSLLSRDSTYKLMMHVWK 161
G K+++P V+ I K + ++P+ + V R + F L RDS + ++
Sbjct: 91 DG-CCKIILPLREVVSIEKMEDTSLLPHPIIVSIRSKVAFQFIELRDRDSLVEALL---- 145
Query: 162 TARTPELAVPKAQLYGNVVRCCPQLVVSSFHDTLLLKDPRASEVDFEASEYSPEDDSSSA 221
AR ++ Y + FH T + D R +++ +S+ S E + +
Sbjct: 146 -ARLKQVHANHPVHYD--TSADDDMASLVFHSTSMCSDHRFGDLEMMSSQNSEESEKEKS 202
Query: 222 GGDQVDAPAAVRRESETILP 241
DA ++S + P
Sbjct: 203 PLMHPDALVTAFQQSGSQSP 222
>AB017114-1|BAA76517.1| 733|Homo sapiens AD 3 protein.
Length = 733
Score = 36.3 bits (80), Expect = 0.18
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 13/200 (6%)
Query: 47 SKQPSKAR-QKKFQRHFPQVGPEEKVLNYYSCAL---VGDLLLQGHLYITKNYFAFYSNV 102
+K+ +AR Q +F R F ++ +EK+ C+L G ++ + +Y F S
Sbjct: 27 TKRDLEARAQNEFFRAFFRLPRKEKLHAVVDCSLWTPFSRCHTAGRMFASDSYICFASRE 86
Query: 103 FGYVTKLLIPTTSVLRITKEKVARIIPNAVGVCTRDE-RHVFGSLLSRDSTYKLMMHVWK 161
G K+++P V+ I K + ++P+ + V R + F L RDS + ++
Sbjct: 87 DG-CCKIILPLREVVSIEKMEDTSLLPHPIIVSIRSKVAFQFIELRDRDSLVEALL---- 141
Query: 162 TARTPELAVPKAQLYGNVVRCCPQLVVSSFHDTLLLKDPRASEVDFEASEYSPEDDSSSA 221
AR ++ Y + FH T + D R +++ +S+ S E + +
Sbjct: 142 -ARLKQVHANHPVHYD--TSADDDMASLVFHSTSMCSDHRFGDLEMMSSQNSEESEKEKS 198
Query: 222 GGDQVDAPAAVRRESETILP 241
DA ++S + P
Sbjct: 199 PLMHPDALVTAFQQSGSQSP 218
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.132 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,101,726
Number of Sequences: 224733
Number of extensions: 1911436
Number of successful extensions: 5370
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 5329
Number of HSP's gapped (non-prelim): 34
length of query: 374
length of database: 73,234,838
effective HSP length: 91
effective length of query: 283
effective length of database: 52,784,135
effective search space: 14937910205
effective search space used: 14937910205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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