GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001450-TA|BGIBMGA001450-PA|IPR004182|GRAM
         (374 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001687-1|AAN71442.1|  852|Drosophila melanogaster RE58243p pro...    99   1e-20
AE014134-593|AAS64619.1|  824|Drosophila melanogaster CG3304-PB,...    99   1e-20
AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,...    99   1e-20
AE014134-591|AAF51119.3| 1104|Drosophila melanogaster CG3304-PA,...    99   1e-20
BT015288-1|AAT94517.1| 1291|Drosophila melanogaster GH16847p pro...    41   0.002
AE014296-3522|AAF51710.1| 1291|Drosophila melanogaster CG7324-PA...    41   0.002
BT001476-1|AAN71231.1|  607|Drosophila melanogaster LD19244p pro...    34   0.37 
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA...    34   0.37 
AY058516-1|AAL13745.1|  406|Drosophila melanogaster LD21896p pro...    32   1.1  
AE014298-2504|AAF48683.1|  406|Drosophila melanogaster CG9089-PA...    32   1.1  
AY058793-1|AAL14022.1|  328|Drosophila melanogaster SD10401p pro...    29   7.9  
AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-P...    29   7.9  
AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-P...    29   7.9  

>BT001687-1|AAN71442.1|  852|Drosophila melanogaster RE58243p
           protein.
          Length = 852

 Score = 98.7 bits (235), Expect = 1e-20
 Identities = 54/172 (31%), Positives = 100/172 (58%), Gaps = 6/172 (3%)

Query: 52  KARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYVTKLLI 111
           K+R + F++ F  V  +E+++  YSCAL  D+L+QG LY+++NY  F++N+F + T + I
Sbjct: 356 KSRAEDFKKLFKDVPNDERLIVDYSCALQRDILVQGRLYVSQNYVCFHANIFSWETHVSI 415

Query: 112 PTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLMMHVWKTARTPELAVP 171
               V  ITKEK A +IPNA+ + +  +++ F +  SRD ++ ++  VW+     +   P
Sbjct: 416 KWKDVTAITKEKTALVIPNAISISSGKDKYFFATFTSRDKSFLMLFRVWQNTLMNKQFSP 475

Query: 172 KAQLYGNVVRCCPQLVVSSFHDTLLLKDP---RASEVDFEASEYSPEDDSSS 220
           + +++ +V  C    +  +  D   + DP   + +E DF+  + + +DDS S
Sbjct: 476 Q-EIWQHVHTCYGDELGLTTDDEDYI-DPTLNKTNEPDFD-FQTAIDDDSYS 524


>AE014134-593|AAS64619.1|  824|Drosophila melanogaster CG3304-PB,
           isoform B protein.
          Length = 824

 Score = 98.7 bits (235), Expect = 1e-20
 Identities = 54/172 (31%), Positives = 100/172 (58%), Gaps = 6/172 (3%)

Query: 52  KARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYVTKLLI 111
           K+R + F++ F  V  +E+++  YSCAL  D+L+QG LY+++NY  F++N+F + T + I
Sbjct: 333 KSRAEDFKKLFKDVPNDERLIVDYSCALQRDILVQGRLYVSQNYVCFHANIFSWETHVSI 392

Query: 112 PTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLMMHVWKTARTPELAVP 171
               V  ITKEK A +IPNA+ + +  +++ F +  SRD ++ ++  VW+     +   P
Sbjct: 393 KWKDVTAITKEKTALVIPNAISISSGKDKYFFATFTSRDKSFLMLFRVWQNTLMNKQFSP 452

Query: 172 KAQLYGNVVRCCPQLVVSSFHDTLLLKDP---RASEVDFEASEYSPEDDSSS 220
           + +++ +V  C    +  +  D   + DP   + +E DF+  + + +DDS S
Sbjct: 453 Q-EIWQHVHTCYGDELGLTTDDEDYI-DPTLNKTNEPDFD-FQTAIDDDSYS 501


>AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,
           isoform C protein.
          Length = 1205

 Score = 98.7 bits (235), Expect = 1e-20
 Identities = 54/172 (31%), Positives = 100/172 (58%), Gaps = 6/172 (3%)

Query: 52  KARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYVTKLLI 111
           K+R + F++ F  V  +E+++  YSCAL  D+L+QG LY+++NY  F++N+F + T + I
Sbjct: 333 KSRAEDFKKLFKDVPNDERLIVDYSCALQRDILVQGRLYVSQNYVCFHANIFSWETHVSI 392

Query: 112 PTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLMMHVWKTARTPELAVP 171
               V  ITKEK A +IPNA+ + +  +++ F +  SRD ++ ++  VW+     +   P
Sbjct: 393 KWKDVTAITKEKTALVIPNAISISSGKDKYFFATFTSRDKSFLMLFRVWQNTLMNKQFSP 452

Query: 172 KAQLYGNVVRCCPQLVVSSFHDTLLLKDP---RASEVDFEASEYSPEDDSSS 220
           + +++ +V  C    +  +  D   + DP   + +E DF+  + + +DDS S
Sbjct: 453 Q-EIWQHVHTCYGDELGLTTDDEDYI-DPTLNKTNEPDFD-FQTAIDDDSYS 501


>AE014134-591|AAF51119.3| 1104|Drosophila melanogaster CG3304-PA,
           isoform A protein.
          Length = 1104

 Score = 98.7 bits (235), Expect = 1e-20
 Identities = 54/172 (31%), Positives = 100/172 (58%), Gaps = 6/172 (3%)

Query: 52  KARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLYITKNYFAFYSNVFGYVTKLLI 111
           K+R + F++ F  V  +E+++  YSCAL  D+L+QG LY+++NY  F++N+F + T + I
Sbjct: 333 KSRAEDFKKLFKDVPNDERLIVDYSCALQRDILVQGRLYVSQNYVCFHANIFSWETHVSI 392

Query: 112 PTTSVLRITKEKVARIIPNAVGVCTRDERHVFGSLLSRDSTYKLMMHVWKTARTPELAVP 171
               V  ITKEK A +IPNA+ + +  +++ F +  SRD ++ ++  VW+     +   P
Sbjct: 393 KWKDVTAITKEKTALVIPNAISISSGKDKYFFATFTSRDKSFLMLFRVWQNTLMNKQFSP 452

Query: 172 KAQLYGNVVRCCPQLVVSSFHDTLLLKDP---RASEVDFEASEYSPEDDSSS 220
           + +++ +V  C    +  +  D   + DP   + +E DF+  + + +DDS S
Sbjct: 453 Q-EIWQHVHTCYGDELGLTTDDEDYI-DPTLNKTNEPDFD-FQTAIDDDSYS 501


>BT015288-1|AAT94517.1| 1291|Drosophila melanogaster GH16847p
           protein.
          Length = 1291

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 31  RVSALGSVSGNDETKDSKQPSKARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLY 90
           ++ +L + +  D+T +S    K  + KF++ F     E  V++Y +  +   +  QG LY
Sbjct: 112 KIQSLYTQNNQDDTGESAD-FKVMKSKFRQIFKMPEEERLVISYSATYVKNKIPRQGQLY 170

Query: 91  ITKNYFAFYSNVFGYVTKLLI 111
           I+ N+  FYS + G   K +I
Sbjct: 171 ISLNHVCFYSYMLGQEIKRII 191


>AE014296-3522|AAF51710.1| 1291|Drosophila melanogaster CG7324-PA
           protein.
          Length = 1291

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 31  RVSALGSVSGNDETKDSKQPSKARQKKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHLY 90
           ++ +L + +  D+T +S    K  + KF++ F     E  V++Y +  +   +  QG LY
Sbjct: 112 KIQSLYTQNNQDDTGESAD-FKVMKSKFRQIFKMPEEERLVISYSATYVKNKIPRQGQLY 170

Query: 91  ITKNYFAFYSNVFGYVTKLLI 111
           I+ N+  FYS + G   K +I
Sbjct: 171 ISLNHVCFYSYMLGQEIKRII 191


>BT001476-1|AAN71231.1|  607|Drosophila melanogaster LD19244p
           protein.
          Length = 607

 Score = 33.9 bits (74), Expect = 0.37
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 198 KDPRASEVDFEASEYSPEDDSSSAGGDQVDAPAAVRR 234
           ++   S+ DF+ S YS ED S SA GD   +  A RR
Sbjct: 522 EEDHGSDEDFKTSSYSDEDTSQSASGDSDSSLEAYRR 558


>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
            protein.
          Length = 2759

 Score = 33.9 bits (74), Expect = 0.37
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 198  KDPRASEVDFEASEYSPEDDSSSAGGDQVDAPAAVRR 234
            ++   S+ DF+ S YS ED S SA GD   +  A RR
Sbjct: 1678 EEDHGSDEDFKTSSYSDEDTSQSASGDSDSSLEAYRR 1714


>AY058516-1|AAL13745.1|  406|Drosophila melanogaster LD21896p
          protein.
          Length = 406

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 8/69 (11%)

Query: 38 VSGNDETKDSKQ--PSKARQ------KKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHL 89
          V+G D+T D+ +  PSKA+       K   +    + P++ V+  Y C L G +    HL
Sbjct: 10 VAGKDKTNDTSKGSPSKAKSNGHAQGKTKSKEMNALPPQKSVVIAYLCWLFGGIFGLHHL 69

Query: 90 YITKNYFAF 98
          Y+ ++  AF
Sbjct: 70 YLHRDRHAF 78


>AE014298-2504|AAF48683.1|  406|Drosophila melanogaster CG9089-PA
          protein.
          Length = 406

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 8/69 (11%)

Query: 38 VSGNDETKDSKQ--PSKARQ------KKFQRHFPQVGPEEKVLNYYSCALVGDLLLQGHL 89
          V+G D+T D+ +  PSKA+       K   +    + P++ V+  Y C L G +    HL
Sbjct: 10 VAGKDKTNDTSKGSPSKAKSNGHAQGKTKSKEMNALPPQKSVVIAYLCWLFGGIFGLHHL 69

Query: 90 YITKNYFAF 98
          Y+ ++  AF
Sbjct: 70 YLHRDRHAF 78


>AY058793-1|AAL14022.1|  328|Drosophila melanogaster SD10401p
           protein.
          Length = 328

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 13  SWARRQAVKPLSGSAPSVRVSALGSVSGNDETKDSKQP 50
           S A+++  K ++  APS  +  +GS S  +  K SKQP
Sbjct: 113 SGAKQKKPKRIAAQAPSKLLGTIGSESETNTAKSSKQP 150


>AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-PA,
            isoform A protein.
          Length = 1420

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 13   SWARRQAVKPLSGSAPSVRVSALGSVSGNDETKDSKQP 50
            S A+++  K ++  APS  +  +GS S  +  K SKQP
Sbjct: 1205 SGAKQKKPKRIAAQAPSKLLGTIGSESETNTAKSSKQP 1242


>AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-PB,
            isoform B protein.
          Length = 1430

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 13   SWARRQAVKPLSGSAPSVRVSALGSVSGNDETKDSKQP 50
            S A+++  K ++  APS  +  +GS S  +  K SKQP
Sbjct: 1215 SGAKQKKPKRIAAQAPSKLLGTIGSESETNTAKSSKQP 1252


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.132    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,765,430
Number of Sequences: 52641
Number of extensions: 642152
Number of successful extensions: 2146
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2133
Number of HSP's gapped (non-prelim): 15
length of query: 374
length of database: 24,830,863
effective HSP length: 86
effective length of query: 288
effective length of database: 20,303,737
effective search space: 5847476256
effective search space used: 5847476256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)