Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001449-TA|BGIBMGA001449-PA|undefined
(117 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27) 35 0.020
SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.079
SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.42
SB_43995| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.74
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 29 0.98
SB_25219| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_42375| Best HMM Match : Borrelia_orfA (HMM E-Value=2.2) 28 2.3
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 27 3.0
SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0) 27 3.0
SB_42534| Best HMM Match : DUF699 (HMM E-Value=0) 27 3.9
SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6) 27 3.9
SB_45261| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_2708| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_13432| Best HMM Match : Reticulon (HMM E-Value=5.1e-16) 27 5.2
SB_59719| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.1
SB_53124| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.1
SB_47057| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.94) 26 9.1
SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.1
SB_39046| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.1
SB_34933| Best HMM Match : RVT_1 (HMM E-Value=3.5e-08) 26 9.1
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 26 9.1
SB_18777| Best HMM Match : RhoGAP (HMM E-Value=4.9) 26 9.1
SB_14210| Best HMM Match : RVT_1 (HMM E-Value=0.2) 26 9.1
SB_11884| Best HMM Match : RhoGAP (HMM E-Value=7.4) 26 9.1
SB_3299| Best HMM Match : RhoGAP (HMM E-Value=2.2) 26 9.1
SB_55944| Best HMM Match : RVT_1 (HMM E-Value=1.6e-11) 26 9.1
SB_53374| Best HMM Match : RhoGAP (HMM E-Value=1.2) 26 9.1
SB_12628| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.1
SB_267| Best HMM Match : RhoGAP (HMM E-Value=3.7) 26 9.1
>SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27)
Length = 228
Score = 34.7 bits (76), Expect = 0.020
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 20 SERGYSKSRECPDQNKPRTDLHSKKS-AK----RVSLHLEEADQPVELRSKKS-EGLLTG 73
S +G S S + K ++ KK+ AK + L E A++ + KKS +G T
Sbjct: 74 SGQGASGSFKLSQDTKKEGEMAEKKAKAKERKLQKQLEKEAAEEEKVKKPKKSRDGEKTK 133
Query: 74 KSLRLSSGGRFPEVKRS--LSDRFSVISDASS-KKPAKGLLTIRKT 116
KS +++S + P+VK+S S + + SDA S KK AK T +KT
Sbjct: 134 KSKKVTSEPKSPKVKKSKDKSTKTTKKSDAKSPKKDAKSPTTTKKT 179
>SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1045
Score = 32.7 bits (71), Expect = 0.079
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 38 TDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSSGGRFP 85
TD K K + +E D ++R K +G LTGK+L GRFP
Sbjct: 15 TDNDKKDGGKNNPISVERGDIIFDVR-KLDDGWLTGKNLNTGRSGRFP 61
>SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 30.3 bits (65), Expect = 0.42
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 2 KETYPDEIMLCFVQGFGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVE 61
KE YP+E F DSE K ++ + K + +K + ++ +D E
Sbjct: 96 KELYPEEFASNFTDSDDDSEDEKKKKKKTSKKRKKSSSKDERKRKSKKIRTVQSSDSETE 155
Query: 62 LRSKK 66
L +K
Sbjct: 156 LNQEK 160
>SB_43995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 29.5 bits (63), Expect = 0.74
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 31 PDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSSGG 82
P +++ TDL SK S ++ S +EE D + + K E L G R S GG
Sbjct: 111 PPESRGSTDLSSKTSKRQASEVIEEGDLGIYPKRVKLEECLDG--ARESDGG 160
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 29.1 bits (62), Expect = 0.98
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 16 GFGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGK 74
G+G + G+ KS+ NK + D SKKS+K + A + E ++ K ++ +
Sbjct: 1462 GYGHAVGGFGKSKVEKTDNK-KKDKKSKKSSKSKKTKIYHAQKTKEEKASKKNDIVVNR 1519
>SB_25219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 24 YSKSRECP-DQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSS 80
+++ E P D P+ L ++++ + S H E +D P + ++ ++ L T ++LRL S
Sbjct: 53 HAEPSEFPQDTQNPQIPLQTRRTLRLPSRHAEPSDSPPDTQNPQT-SLQTRRTLRLPS 109
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 28.7 bits (61), Expect = 1.3
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
Query: 24 YSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSSGGR 83
+ + C ++ R LH + S R +L E QP + L +RL GGR
Sbjct: 835 HDTEQHCAGNSRKR--LHGRSSLLRKEPNLAEMTQPWQT--------LDPLRIRLPGGGR 884
Query: 84 FPEVKRSLSDRFSVISDASSKKPAKGLLTIRK 115
P V RS + ++ A +P L +R+
Sbjct: 885 -PHVPRSTGKNATTVTGARRHRPEPHLFPLRR 915
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/67 (26%), Positives = 29/67 (43%)
Query: 2 KETYPDEIMLCFVQGFGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVE 61
+E Y +M + F D + +S + +NK + S+ R SLH E+ P E
Sbjct: 1231 REEYLSRVMNESRKRFADEHKRHSFHSDYMSRNKEAVLVKPAWSSSRSSLHDEQRSPPEE 1290
Query: 62 LRSKKSE 68
R +E
Sbjct: 1291 QRESLNE 1297
>SB_42375| Best HMM Match : Borrelia_orfA (HMM E-Value=2.2)
Length = 475
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 26 KSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSE 68
KS E + + DL+ KKS + L+L++ D +L KK +
Sbjct: 243 KSYENEGKENDKYDLNLKKSDDKADLNLKKDDDKADLNLKKDD 285
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 13 FVQGFGDSERGYSKSRECPDQNKP---RTDLHSKK 44
F+ G G +E +++ P NKP RT +HS++
Sbjct: 747 FLNGTGSTEEAFNEVESSPFNNKPRIARTPVHSRR 781
>SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0)
Length = 446
Score = 27.5 bits (58), Expect = 3.0
Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 19 DSERGYSKSRECPDQNKP--RTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSL 76
+ ER +S+ E P + +K++++ S +EEA++ EL KS+ L+ G+
Sbjct: 160 EKERDHSEGDEVETTAPPVEEQEKEEEKASEKPSAVIEEANEDQELCPAKSDSLV-GQLF 218
Query: 77 RLSSGGRFPEVKRSLSDRF 95
+ + E+++ S++F
Sbjct: 219 VNQNIPKMEELEKHFSEKF 237
>SB_42534| Best HMM Match : DUF699 (HMM E-Value=0)
Length = 739
Score = 27.1 bits (57), Expect = 3.9
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 39 DLHSKKSAKRVSLHLEEADQPVELRSKKS-EGLLTGKSLRLSSGGRFPEVKRSLSDR--F 95
D+H + AK ++ LEEA + +E++ KK E L + G+ + + +LS +
Sbjct: 440 DVHMEPLAKSLNQDLEEAAKEMEVKQKKELEKLKLVDFSEYAISGKEDDWQEALSGKGTH 499
Query: 96 SVISDASSKK 105
+++S SSK+
Sbjct: 500 NLVSIPSSKR 509
>SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6)
Length = 1705
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 14 VQGFGDSERGYSKSRECP-DQNKPRTDLHSKKSAKR 48
+ G GD G + + + P +Q +PR +H KKS K+
Sbjct: 1327 LNGKGDESPGKTVTPKLPVNQQQPRNLIHKKKSKKK 1362
>SB_45261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 37 RTDLHSKKSAKRVSLHLEEADQPVELRS 64
R ++H K K V+ L +AD P+E+++
Sbjct: 26 REEVHKKAFTKWVNSRLAQADPPIEIKN 53
>SB_2708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 26.6 bits (56), Expect = 5.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 14 VQGFGDSERGYSKSRECPDQNKPRTDLHSKKSAK 47
V+GF + +RG K E DQ+K + KKS K
Sbjct: 27 VKGFKNIKRGKDKKTEGGDQDKKKDKDKKKKSDK 60
>SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1451
Score = 26.6 bits (56), Expect = 5.2
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 57 DQPVELRSKKSEGLLTGKSLRLSSGGRFPEVKRSLSDRFSVISDASSKKPAKGLLT 112
DQP+ L+ S +LTG ++ + + P V + + +SD K+P LT
Sbjct: 1078 DQPIRLQP--SSPVLTGVPVKPLTPLQIPVVSDQPNPQMPAVSDVPMKQPVASTLT 1131
>SB_13432| Best HMM Match : Reticulon (HMM E-Value=5.1e-16)
Length = 621
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 15 QGFGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVE 61
+G DSE + PD +P + S + L ++E QP +
Sbjct: 266 EGKVDSEEKVEEPETFPDSTEPEEEPEPVSSTSNIDLLMDETAQPAQ 312
>SB_59719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 49 VSLHLEEADQPVELRSKKSEGLLTGKSLRLS 79
VS L ++ P LRSK+S ++ G++ R S
Sbjct: 168 VSSRLISSNSPYSLRSKRSHSVVPGRTDRFS 198
>SB_53124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 49 VSLHLEEADQPVELRSKKSEGLLTGKSLRLS 79
VS L ++ P LRSK+S ++ G++ R S
Sbjct: 204 VSSRLISSNSPYSLRSKRSHSVVPGRTDRFS 234
>SB_47057| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.94)
Length = 969
Score = 25.8 bits (54), Expect = 9.1
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 25 SKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGL-LTGKSLRLSSGGR 83
S+S E P + KPR + S S E PV KS + + LSS GR
Sbjct: 89 SQSEEKPKRTKPRVTARKRYSTPDKSGSSEREGSPVTKGGSKSPNRGRSSRKTSLSSTGR 148
Query: 84 FPEVK 88
+++
Sbjct: 149 KSDLR 153
>SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2103
Score = 25.8 bits (54), Expect = 9.1
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 47 KRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSSGGRF-------PEVKRSLSDRFSVIS 99
+R + EE + V R +K+E K LSS G P + + S+ FS+ S
Sbjct: 371 RRAKMRREEKVKAVPGRRRKTEAERANKEYLLSSSGETSISPTPPPRKQSNHSNSFSIES 430
Query: 100 DASSKKPAKGLLTI 113
K P +G +++
Sbjct: 431 ILRRKDPPRGEVSV 444
>SB_39046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 49 VSLHLEEADQPVELRSKKSEGLLTGKSLRLS 79
VS L ++ P LRSK+S ++ G++ R S
Sbjct: 158 VSSRLISSNSPYSLRSKRSHSVVPGRTDRFS 188
>SB_34933| Best HMM Match : RVT_1 (HMM E-Value=3.5e-08)
Length = 390
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 49 VSLHLEEADQPVELRSKKSEGLLTGKSLRLS 79
VS L ++ P LRSK+S ++ G++ R S
Sbjct: 346 VSSRLISSNSPYSLRSKRSHSVVPGRTDRFS 376
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 16 GFGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSK 65
G DSE E P++ KPR + + +R + +E P++ RS+
Sbjct: 160 GGSDSESDSESEEESPEEEKPRPHPVADED-ERADVRRQEERTPLKRRSR 208
>SB_18777| Best HMM Match : RhoGAP (HMM E-Value=4.9)
Length = 260
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 49 VSLHLEEADQPVELRSKKSEGLLTGKSLRLS 79
VS L ++ P LRSK+S ++ G++ R S
Sbjct: 216 VSSRLISSNSPYSLRSKRSHSVVPGRTDRFS 246
>SB_14210| Best HMM Match : RVT_1 (HMM E-Value=0.2)
Length = 712
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 49 VSLHLEEADQPVELRSKKSEGLLTGKSLRLS 79
VS L ++ P LRSK+S ++ G++ R S
Sbjct: 668 VSSRLISSNSPYSLRSKRSHSVVPGRTDRFS 698
>SB_11884| Best HMM Match : RhoGAP (HMM E-Value=7.4)
Length = 248
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 49 VSLHLEEADQPVELRSKKSEGLLTGKSLRLS 79
VS L ++ P LRSK+S ++ G++ R S
Sbjct: 204 VSSRLISSNSPYSLRSKRSHSVVPGRTDRFS 234
>SB_3299| Best HMM Match : RhoGAP (HMM E-Value=2.2)
Length = 248
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 49 VSLHLEEADQPVELRSKKSEGLLTGKSLRLS 79
VS L ++ P LRSK+S ++ G++ R S
Sbjct: 204 VSSRLISSNSPYSLRSKRSHSVVPGRTDRFS 234
>SB_55944| Best HMM Match : RVT_1 (HMM E-Value=1.6e-11)
Length = 387
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 49 VSLHLEEADQPVELRSKKSEGLLTGKSLRLS 79
VS L ++ P LRSK+S ++ G++ R S
Sbjct: 343 VSSRLISSNSPYSLRSKRSHSVVPGRTDRFS 373
>SB_53374| Best HMM Match : RhoGAP (HMM E-Value=1.2)
Length = 248
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 49 VSLHLEEADQPVELRSKKSEGLLTGKSLRLS 79
VS L ++ P LRSK+S ++ G++ R S
Sbjct: 204 VSSRLISSNSPYSLRSKRSHSVVPGRTDRFS 234
>SB_12628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1163
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 49 VSLHLEEADQPVELRSKKSEGLLTGKSLRLS 79
VS L ++ P LRSK+S ++ G++ R S
Sbjct: 1119 VSSRLISSNSPYSLRSKRSHSVVPGRTDRFS 1149
>SB_267| Best HMM Match : RhoGAP (HMM E-Value=3.7)
Length = 284
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 49 VSLHLEEADQPVELRSKKSEGLLTGKSLRLS 79
VS L ++ P LRSK+S ++ G++ R S
Sbjct: 240 VSSRLISSNSPYSLRSKRSHSVVPGRTDRFS 270
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.129 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,884,317
Number of Sequences: 59808
Number of extensions: 140477
Number of successful extensions: 314
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 291
Number of HSP's gapped (non-prelim): 34
length of query: 117
length of database: 16,821,457
effective HSP length: 73
effective length of query: 44
effective length of database: 12,455,473
effective search space: 548040812
effective search space used: 548040812
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)
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