GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001449-TA|BGIBMGA001449-PA|undefined
         (117 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   2.8  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       22   6.6  

>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 24  YSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEA 56
           Y + RE P+  K    LH  +   +++L ++ A
Sbjct: 261 YKQIREAPEMEKMNEKLHIGRRTAKLNLRMKVA 293


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 2  KETYPDEIMLCFVQGFGDSER 22
          K T   ++ +  V GF DSER
Sbjct: 57 KSTIVKQMRILHVNGFSDSER 77


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.129    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,122
Number of Sequences: 2123
Number of extensions: 3856
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 2
length of query: 117
length of database: 516,269
effective HSP length: 56
effective length of query: 61
effective length of database: 397,381
effective search space: 24240241
effective search space used: 24240241
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 43 (21.4 bits)