Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001449-TA|BGIBMGA001449-PA|undefined
(117 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 30 0.49
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 30 0.49
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 30 0.49
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 29 0.85
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 29 0.85
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 0.85
Z73969-14|CAA98240.1| 541|Caenorhabditis elegans Hypothetical p... 29 1.1
AF072379-1|AAC62466.1| 541|Caenorhabditis elegans Akt/PKB serin... 29 1.1
Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z82081-2|CAE46685.1| 395|Caenorhabditis elegans Hypothetical pr... 27 3.4
AL033514-23|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 27 3.4
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 27 3.4
Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical pr... 27 4.5
U51163-1|AAA96319.1| 506|Caenorhabditis elegans CE-FKH-1 protein. 27 4.5
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr... 26 7.9
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 26 7.9
AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical ... 26 7.9
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.9 bits (64), Expect = 0.49
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 17 FGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGK 74
F E+G+ +S ECP+ KPR + + K + +E+ + V K SEGL+ K
Sbjct: 265 FNCGEQGH-RSNECPNPAKPREGVEG-EGPKATYVPVEDNMEDVFNMQKISEGLMFNK 320
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.9 bits (64), Expect = 0.49
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 17 FGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGK 74
F E+G+ +S ECP+ KPR + + K + +E+ + V K SEGL+ K
Sbjct: 265 FNCGEQGH-RSNECPNPAKPREGVEG-EGPKATYVPVEDNMEDVFNMQKISEGLMFNK 320
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 29.9 bits (64), Expect = 0.49
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 17 FGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGK 74
F E+G+ +S ECP+ KPR + + K + +E+ + V K SEGL+ K
Sbjct: 265 FNCGEQGH-RSNECPNPAKPREGVEG-EGPKATYVPVEDNMEDVFNMQKISEGLMFNK 320
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 29.1 bits (62), Expect = 0.85
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 17 FGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGK 74
F E+G+ +S ECP+ KPR + K + +E+ + V K SEGL+ K
Sbjct: 476 FNCGEQGH-RSNECPNPAKPREGAEG-EGPKATYVPVEDNMEEVFNMQKISEGLMFNK 531
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 29.1 bits (62), Expect = 0.85
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 17 FGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGK 74
F E+G+ +S ECP+ KPR + K + +E+ + V K SEGL+ K
Sbjct: 476 FNCGEQGH-RSNECPNPAKPREGAEG-EGPKATYVPVEDNMEEVFNMQKISEGLMFNK 531
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 29.1 bits (62), Expect = 0.85
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 17 FGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGK 74
F E+G+ +S ECP+ KPR + K + +E+ + V K SEGL+ K
Sbjct: 476 FNCGEQGH-RSNECPNPAKPREGAEG-EGPKATYVPVEDNMEEVFNMQKISEGLMFNK 531
>Z73969-14|CAA98240.1| 541|Caenorhabditis elegans Hypothetical
protein C12D8.10a protein.
Length = 541
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 1 MKETYPDEIMLCFVQGFGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPV 60
+K ++ ++ LCFV F + ++ R+C ++PR + + + +L D +
Sbjct: 256 LKYSFQEQHYLCFVMQFANGGELFTHVRKCGTFSEPRARFYGAEIVLALG-YLHRCD--I 312
Query: 61 ELRSKKSEGLLTGK 74
R K E LL K
Sbjct: 313 VYRDMKLENLLLDK 326
>AF072379-1|AAC62466.1| 541|Caenorhabditis elegans Akt/PKB
serine/threonine kinase protein.
Length = 541
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 1 MKETYPDEIMLCFVQGFGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPV 60
+K ++ ++ LCFV F + ++ R+C ++PR + + + +L D +
Sbjct: 256 LKYSFQEQHYLCFVMQFANGGELFTHVRKCGTFSEPRARFYGAEIVLALG-YLHRCD--I 312
Query: 61 ELRSKKSEGLLTGK 74
R K E LL K
Sbjct: 313 VYRDMKLENLLLDK 326
>Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical
protein F53H10.2 protein.
Length = 900
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 24 YSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKS 75
Y+ ++CPD + +L K+ ++L ++++PV + +KK + +G S
Sbjct: 604 YTWKKDCPDDYRKLRNLRRKRQLLDINLQKNQSEEPV-VPAKKISIIESGDS 654
>Z82081-2|CAE46685.1| 395|Caenorhabditis elegans Hypothetical
protein W09H1.1b protein.
Length = 395
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 26 KSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSSGGRFP 85
K+ + D P L + +S+ +S+ + + V + S + + K + S R+P
Sbjct: 51 KNADTVDSPTPTPSLTASRSSSVISIASTVSTETV-VSSGRLIKVAPAKVRQSKSASRWP 109
Query: 86 EVKRSLSDRFSVISD 100
S+ D FS++SD
Sbjct: 110 GFCHSVQDTFSILSD 124
>AL033514-23|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 40 LHSKKSAKRVSLHLEEADQPVELRSKKSE 68
L KK ++V HLE + RSKKSE
Sbjct: 1146 LSEKKPTRQVERHLESLGATIPERSKKSE 1174
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 40 LHSKKSAKRVSLHLEEADQPVELRSKKSE 68
L KK ++V HLE + RSKKSE
Sbjct: 1146 LSEKKPTRQVERHLESLGATIPERSKKSE 1174
>Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical
protein F38A6.1c protein.
Length = 411
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/91 (20%), Positives = 37/91 (40%)
Query: 21 ERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSS 80
E G R+ + K R K++A LH ++ +E++ + + T SL S
Sbjct: 226 ENGCYLRRQKRFKVKEREPSRKKRNANSQQLHQQQHIPKMEIKEEDPTSITTTSSLGAYS 285
Query: 81 GGRFPEVKRSLSDRFSVISDASSKKPAKGLL 111
K+ + + + DA++ GL+
Sbjct: 286 LIPQISTKKEIKEELKAVQDATAAAANLGLI 316
>Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical
protein F38A6.1b protein.
Length = 442
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/91 (20%), Positives = 37/91 (40%)
Query: 21 ERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSS 80
E G R+ + K R K++A LH ++ +E++ + + T SL S
Sbjct: 257 ENGCYLRRQKRFKVKEREPSRKKRNANSQQLHQQQHIPKMEIKEEDPTSITTTSSLGAYS 316
Query: 81 GGRFPEVKRSLSDRFSVISDASSKKPAKGLL 111
K+ + + + DA++ GL+
Sbjct: 317 LIPQISTKKEIKEELKAVQDATAAAANLGLI 347
>Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical
protein F38A6.1a protein.
Length = 506
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/91 (20%), Positives = 37/91 (40%)
Query: 21 ERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSS 80
E G R+ + K R K++A LH ++ +E++ + + T SL S
Sbjct: 321 ENGCYLRRQKRFKVKEREPSRKKRNANSQQLHQQQHIPKMEIKEEDPTSITTTSSLGAYS 380
Query: 81 GGRFPEVKRSLSDRFSVISDASSKKPAKGLL 111
K+ + + + DA++ GL+
Sbjct: 381 LIPQISTKKEIKEELKAVQDATAAAANLGLI 411
>U51163-1|AAA96319.1| 506|Caenorhabditis elegans CE-FKH-1 protein.
Length = 506
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/91 (20%), Positives = 37/91 (40%)
Query: 21 ERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSS 80
E G R+ + K R K++A LH ++ +E++ + + T SL S
Sbjct: 321 ENGCYLRRQKRFKVKEREPSRKKRNANSQQLHQQQHIPKMEIKEEDPTSITTTSSLGAYS 380
Query: 81 GGRFPEVKRSLSDRFSVISDASSKKPAKGLL 111
K+ + + + DA++ GL+
Sbjct: 381 LIPQISTKKEIKEELKAVQDATAAAANLGLI 411
>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical protein
F31C3.3 protein.
Length = 2029
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 42 SKKSAKRVSLHLEEA-DQPVELRSKKSE 68
S + KR+++HLEEA D P + KK E
Sbjct: 1312 SNDAVKRLNVHLEEASDTPKDPSPKKKE 1339
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 25.8 bits (54), Expect = 7.9
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 19 DSERGYSK--SRECPDQNKPRTDLHSKKSAKRVS--LHLEEADQPVELRSKKSE 68
D ERG + RE QNK + K+ AKR+ + + A P ++ KK +
Sbjct: 244 DKERGEDRYERREMEKQNKAERERRRKEEAKRIRKLVDIAYAKDPRIIKFKKEQ 297
>AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical
protein M70.4 protein.
Length = 822
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 74 KSLRLSSGGRF-PEVKRSLSDRFSVISDASSKKPAKGLLTIRKTW 117
KS+ + S G + + SLS+ FS+ DASS + +T+ W
Sbjct: 561 KSVAIQSNGSYNAHLLLSLSNAFSIFPDASSVLVIEEDVTLSTDW 605
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.129 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,822,487
Number of Sequences: 27539
Number of extensions: 103560
Number of successful extensions: 262
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 257
Number of HSP's gapped (non-prelim): 28
length of query: 117
length of database: 12,573,161
effective HSP length: 72
effective length of query: 45
effective length of database: 10,590,353
effective search space: 476565885
effective search space used: 476565885
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)
- SilkBase 1999-2023 -