Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001448-TA|BGIBMGA001448-PA|IPR000467|D111/G-patch,
IPR008162|Inorganic pyrophosphatase
(945 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0221 + 5962606-5963197,5963711-5963837,5963994-5964100,596... 95 3e-19
02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,362... 48 4e-05
04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-89... 47 6e-05
08_02_0036 - 11455762-11455802,11455996-11456104,11456207-114568... 46 2e-04
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 44 4e-04
03_01_0177 + 1424773-1424850,1425307-1425391,1425498-1425577,142... 38 0.050
12_02_1111 - 26157796-26160330 36 0.12
01_05_0166 + 18844468-18845184,18847394-18847690 36 0.12
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 36 0.12
04_04_0422 + 25098612-25099025,25099500-25099633,25099817-251000... 35 0.27
04_04_0489 + 25600543-25601368,25601441-25602282 35 0.35
07_01_0075 - 558829-560859 33 1.1
02_03_0131 - 15576422-15577021 33 1.1
06_01_0668 - 4882174-4884204 33 1.4
05_06_0098 + 25560158-25560925 33 1.4
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 32 1.9
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 31 3.3
03_02_0392 - 8070342-8071628 31 3.3
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 31 5.7
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 31 5.7
02_03_0387 - 18412064-18412144,18412280-18412361,18412922-184131... 31 5.7
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 30 7.6
05_07_0148 + 28024820-28025293,28025655-28025702,28026034-280260... 30 7.6
04_01_0166 - 1861750-1862181,1862317-1863873 30 7.6
04_01_0002 - 73522-74064 30 7.6
>09_02_0221 +
5962606-5963197,5963711-5963837,5963994-5964100,
5964185-5964328,5964700-5964822,5964921-5965103,
5965540-5965718,5965797-5965823
Length = 493
Score = 94.7 bits (225), Expect = 3e-19
Identities = 46/106 (43%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 823 HHIGDFLPPEELKKFMEKYSALKNGKEPDLSDYKEFKLKEDNVGFKMLQKLGWNEGQGLG 882
HH+GDF+P EEL+KFM + + K + K K++ DN+G K+L K+GW EG+GLG
Sbjct: 372 HHMGDFIPQEELEKFMARCNDAAAQKATKEAAEKA-KIQADNIGHKLLSKMGWREGEGLG 430
Query: 883 VEGSGIVEPINKAKQPVQNLGLGASTSDVVSPDDDEFDAYRKRMML 928
E SG +PI +LG+GA V+ +DD ++ Y+KRMML
Sbjct: 431 SERSGRADPIMAGDVKKDHLGVGAVQPGEVTSEDDIYEQYKKRMML 476
>02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,
3626311-3626479,3626701-3626871,3626948-3627016,
3627094-3627201,3627844-3627997,3628659-3628738,
3628822-3628914,3628951-3629073,3629165-3629915,
3630123-3630163,3630338-3630385
Length = 1038
Score = 48.0 bits (109), Expect = 4e-05
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 860 LKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGA 906
+ E NVG ++L+ +GW EG GLG GSGI EP+ +AK GLG+
Sbjct: 959 IDESNVGNRILRNMGWQEGLGLGKTGSGIKEPV-QAKSVDVRAGLGS 1004
>04_01_0082 +
897026-897028,897101-897350,898454-898608,898686-898967,
899078-899160,899335-899485,899896-899952,900279-900479
Length = 393
Score = 47.2 bits (107), Expect = 6e-05
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 859 KLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTSDVVSPDDD 917
+L NVGF++LQK+GW +G+GLG GI EPI KA LG+G D +D
Sbjct: 58 QLTSSNVGFRLLQKMGW-KGKGLGKNEQGITEPI-KAGIRDAKLGVGKQEQDDFFTSED 114
>08_02_0036 -
11455762-11455802,11455996-11456104,11456207-11456854,
11457422-11457491,11458563-11458624,11458729-11458803,
11459423-11459514,11460233-11461466
Length = 776
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 849 EPDLSDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLG 905
E D F++ G KM+ K+G+ EG GLG +G G+++PI ++P ++LGLG
Sbjct: 597 ESDSVKLGTFEMHTKGFGSKMMAKMGFIEGTGLGKDGQGMMQPIQPIQRP-KSLGLG 652
Score = 38.3 bits (85), Expect = 0.029
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 845 KNGKEPDLSDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPI 892
+N ++ ++ F+ G KM+ ++G+ EG GLG +G GIV P+
Sbjct: 678 RNLRKVEIGGVGSFERHTKGFGSKMMARMGFVEGSGLGKDGQGIVNPL 725
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 846 NGKEPDLSDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPIN-KAKQPVQNLGL 904
+G + + + + +++ V KM+ K+G+ EG GLGV G G+++PI K P Q+L
Sbjct: 288 SGVQTETAIFAKWEHHTRGVASKMMAKMGYREGMGLGVSGQGMLDPIPVKVLPPKQSLDH 347
Query: 905 GASTSDV 911
+ S+V
Sbjct: 348 AVAASEV 354
>03_01_0177 +
1424773-1424850,1425307-1425391,1425498-1425577,
1425771-1425898,1425962-1426049,1426187-1426277,
1426712-1426881,1427151-1427438,1427527-1427643,
1427924-1427976,1428029-1428090,1429042-1429118,
1429269-1429322,1429417-1429476,1429581-1429658,
1429805-1429851,1429933-1430051,1430280-1430364,
1430443-1430557,1430662-1430784,1430869-1430969,
1431346-1431475
Length = 742
Score = 37.5 bits (83), Expect = 0.050
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 860 LKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGA-STSDVVSPDDDE 918
+ + F++++++GW EG+GLG + GI + + K LG+G S + D +
Sbjct: 13 IARQSAAFRLMKQMGWEEGEGLGKDKQGIKGHV-RVKNKQDTLGVGVDSPHNKWVYDTTQ 71
Query: 919 FDAYRKRM 926
FD K++
Sbjct: 72 FDNILKKL 79
>12_02_1111 - 26157796-26160330
Length = 844
Score = 36.3 bits (80), Expect = 0.12
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 868 KMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGA 906
KM+ +G+ +G GLG GIV P+ +P +N GLG+
Sbjct: 188 KMMAMMGYKDGMGLGKNEQGIVAPVETTLRP-KNAGLGS 225
>01_05_0166 + 18844468-18845184,18847394-18847690
Length = 337
Score = 36.3 bits (80), Expect = 0.12
Identities = 49/209 (23%), Positives = 74/209 (35%), Gaps = 18/209 (8%)
Query: 688 PPADIKPPGVIAPMPPNIL----PGPKLAKIDEEGVKLTTVNRNNQALMQYAMTNYGRTN 743
PP KPP AP PP++L P PK + Q A+ T
Sbjct: 3 PPTLRKPPATFAP-PPSVLRNSRPAPKAPAAQPPPPPTLPIETTTSTSFQPALVAVQSTV 61
Query: 744 LNPDEWKQCEDNFKLNLLYQDMLKKRQEAERLAAAGKHKYEYDSDEDTTDGTWEHKLRAK 803
+ +E+ N +D LK+ +EAE + + E + E + A
Sbjct: 62 M--EEYDPARPN-DYEDYRKDKLKRAKEAEVRKELERRRREEEERERERELREREGRDAL 118
Query: 804 EMFATEKWADELTRQAAGKHHIGDFLPPEELKKFMEKYSALKNGKEPDLSDYKEFKLKED 863
+ E W R+AA G P A+ N L ++
Sbjct: 119 NISGEEAWK----RRAAMS---GSAAPRPSSSPPHGDGFAIGNSSSSGLGLGAGGQM--- 168
Query: 864 NVGFKMLQKLGWNEGQGLGVEGSGIVEPI 892
+M+ ++GW EGQGLG + GI P+
Sbjct: 169 TAAQRMMARMGWKEGQGLGKQEQGITAPL 197
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 36.3 bits (80), Expect = 0.12
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 864 NVGFKMLQKLGWNEGQGLGVEGSGIVEPI 892
N KM++ +GW EG+ LG G+VEPI
Sbjct: 417 NSAKKMMENMGWKEGEALGKSTKGMVEPI 445
>04_04_0422 +
25098612-25099025,25099500-25099633,25099817-25100067,
25100130-25100494
Length = 387
Score = 35.1 bits (77), Expect = 0.27
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 860 LKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTSDVVSPDD 916
L + + +++ ++ + EG GLG G GI++PIN K+ + G+G S S D
Sbjct: 29 LATNQIVARLMAQMNYEEGTGLGKYGHGIIDPINPTKKYGKG-GVGKFESSYDSDSD 84
>04_04_0489 + 25600543-25601368,25601441-25602282
Length = 555
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 868 KMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTSDVVSPDD 916
+++ ++ + EG GLG G GI++PIN K+ + G+G S S D
Sbjct: 104 RLMAQMNYEEGTGLGKYGHGIIDPINPTKKYGKG-GVGKFESSYDSDSD 151
>07_01_0075 - 558829-560859
Length = 676
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 763 QDMLKKRQEAERLAAAGKHKYEYDSDEDTTD-----GTWEHKLRAKEMFATEKWADELTR 817
Q +L R A+ AA K K E ++D + G + L+ + A ++W +++
Sbjct: 392 QAVLDARASAD--AAKEKKKLERKLEKDLENENGGAGVYSASLKKHYLLADDEWKEDILP 449
Query: 818 QAAGKHHIGDFLPPEELKKFME 839
+ H++ DFL P+ L++ E
Sbjct: 450 EILDGHNVADFLDPDILQRCEE 471
>02_03_0131 - 15576422-15577021
Length = 199
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 124 QDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRES 170
+D D+ D + + DR R++ RR +R R R++SP RR S
Sbjct: 32 RDRDHRDRDRDKERDRDRDRDRERRRGERDRKRSRSPSADRSHRRHS 78
>06_01_0668 - 4882174-4884204
Length = 676
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 780 KHKYEYD-SDEDTTDGTWEHKLRAKEMFATEKWADELTRQAAGKHHIGDFLPPEELKKFM 838
+ K E D +E+ G + L+ + A ++W +++ + H++ DFL P+ L++
Sbjct: 411 ERKLEKDLENENGGAGVYSASLKKHYLLADDEWKEDILPEILDGHNVADFLDPDILQRCE 470
Query: 839 E 839
E
Sbjct: 471 E 471
>05_06_0098 + 25560158-25560925
Length = 255
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 511 PNSHESGKIXXXXXXXXXXQNRKPKETNPGDVPPPPSNATQDAFPPS 557
PNS S + P P PPPPS+++Q A PPS
Sbjct: 5 PNSPSSSTSSSSPSSAAAAASSSPSSHRPP--PPPPSSSSQPALPPS 49
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 32.3 bits (70), Expect = 1.9
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 612 DKKPVVKPEDKYEPEFSLEDDDSGDNRR-IKEESQDSSLVDYKNREYKREASSQSDXXXX 670
D+ P + + E + E ++G R K E+ +K++ K+ S+S
Sbjct: 347 DRSPSRRDKSPSERGRTTESHEAGKKSRGAKLENNSLEKAQHKSKSTKQSTKSKSSSNGS 406
Query: 671 XXXXXXXXXXS--RWSDEPPPADIKPPGVIAPMPPNILP 707
++++ PPP + PP P PP LP
Sbjct: 407 NEKISKEKATETIQYTELPPPPPLPPPPPPPPPPPPPLP 445
>12_02_1286 -
27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 598 KMFRELVDNIRKGFDKKPVVKPEDKYEPEFSLEDDDSGDNRRIKEESQDSSLVDYKNREY 657
K E+VD I K F K VK +YE E L+D + R++ +Q S L E
Sbjct: 803 KKINEIVDRIYKDFSKSVGVKNIREYE-ERQLKDAQALQERKLSLSNQMSKLKYQLEYEQ 861
Query: 658 KRE 660
KR+
Sbjct: 862 KRD 864
>03_02_0392 - 8070342-8071628
Length = 428
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 850 PDLSDYKEFK-LKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQP-VQNLGLGAS 907
PD EF+ + + G +L GW+EG+G+G G + + ++ Q LG S
Sbjct: 169 PDHRGLDEFRDVPVEGFGAALLAGYGWSEGKGIGRNNKGDTKVVEYDRRAGTQGLGYNPS 228
Query: 908 TSD 910
+D
Sbjct: 229 EAD 231
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 30.7 bits (66), Expect = 5.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 687 PPPADIKP--PGVIAPMPPNILPGP 709
PPP DI P P + P+PP + P P
Sbjct: 412 PPPPDISPSPPPSVTPLPPVVYPSP 436
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 30.7 bits (66), Expect = 5.7
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 168 RESVDNINTNSIPSLMQFPVRQPKDSEEQDNWKSKTDGDSDSNSEQ 213
R +V N+N SI ++ + R K SE Q K+K + D + E+
Sbjct: 294 RNAVKNLNGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEK 339
>02_03_0387 -
18412064-18412144,18412280-18412361,18412922-18413142,
18413387-18413745,18413834-18414443,18414546-18414605,
18414685-18414751,18414843-18414936,18415012-18415125,
18415242-18415308,18415386-18415551,18416587-18417080
Length = 804
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 116 EAVKKPEKQDEDNSDSNTQRRHSGDRGREKYR-RWTDRGRNRAQSPITPVVVRRESVDNI 174
E+ ++ +K D + ++ +RGR + R R DR R A+ RE D
Sbjct: 44 ESYREKDKDDRREKEKEKEKERDSERGRGRDRDRGKDRDRGEAERD-----KERERKDRD 98
Query: 175 NTNSIPSLMQFPVRQPKDSEEQDNWKSKTDGDSD-SNSEQGN 215
S R+ KD ++ K + D D S E+G+
Sbjct: 99 KEKSRGRDKSKEEREDKDYRDKSRGKDRGDDGGDLSKGEEGD 140
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 119 KKPEKQDEDNSDSNTQRR-HSGDRGREKYRRWTDRGRNRAQSP 160
++ E D + SD +RR H +R R++ R R R+R++SP
Sbjct: 112 ERREHHDRERSDDRDRRRGHDSERRRDRDRDGHRRHRSRSRSP 154
>05_07_0148 +
28024820-28025293,28025655-28025702,28026034-28026080,
28026334-28026496,28026595-28026656,28026820-28027003,
28027093-28027182,28027553-28027686,28027747-28027936,
28028103-28029033,28029860-28030065
Length = 842
Score = 30.3 bits (65), Expect = 7.6
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 589 LHNTDSKEYKMFRELVDNIRKGFDKKPVVKPEDKYEPEFSLEDDDSGDNRRIKEESQDSS 648
L+ D +K + IRK V K D E +++DDD + ++E + +S
Sbjct: 252 LYVLDKNSFKHILKWRIRIRKALSSSEVTKKTDDTAVEVNVKDDD----QLLQEMEELTS 307
Query: 649 LVDYKNREYKREASSQ 664
++D K + K+ S +
Sbjct: 308 VIDRKKKREKKRQSKR 323
>04_01_0166 - 1861750-1862181,1862317-1863873
Length = 662
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 153 GRNRAQSPITPVVVRRESVDNINTNSIPSLMQFPVR-QPKDSEEQ 196
G+ + +PIT +VVR++ V ++ +P + + PV+ QP+D +Q
Sbjct: 115 GKGISNAPIT-LVVRKKGVPDLTLVDLPGITRVPVKGQPEDIYDQ 158
>04_01_0002 - 73522-74064
Length = 180
Score = 30.3 bits (65), Expect = 7.6
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 749 WKQCEDN-FKLNLLYQDMLKKR-QEAERLAAAGKHKYEYDS 787
W + D+ ++ L + D+ KR +EAER A KHKY Y S
Sbjct: 140 WMEAADDMYEEALEHMDVQHKRLEEAERREAVLKHKYSYTS 180
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.309 0.129 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,640,714
Number of Sequences: 37544
Number of extensions: 859381
Number of successful extensions: 3008
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2955
Number of HSP's gapped (non-prelim): 66
length of query: 945
length of database: 14,793,348
effective HSP length: 89
effective length of query: 856
effective length of database: 11,451,932
effective search space: 9802853792
effective search space used: 9802853792
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 65 (30.3 bits)
- SilkBase 1999-2023 -