GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001448-TA|BGIBMGA001448-PA|IPR000467|D111/G-patch,
IPR008162|Inorganic pyrophosphatase
         (945 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    29   0.18 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               29   0.23 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   5.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   8.8  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 29.1 bits (62), Expect = 0.18
 Identities = 17/61 (27%), Positives = 27/61 (44%)

Query: 715 DEEGVKLTTVNRNNQALMQYAMTNYGRTNLNPDEWKQCEDNFKLNLLYQDMLKKRQEAER 774
           D  G+ L  +NRN  A +         T+    E  QCE N K+  +  D+++    A+ 
Sbjct: 145 DASGLNLLPMNRNRPAYLASKCALTTLTDCLRSELAQCESNIKVISISPDLVETDMTAQW 204

Query: 775 L 775
           L
Sbjct: 205 L 205


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 865 VGFKMLQKLGWNEGQGLGVEGSGIVEPI 892
           +G K+L ++G+  G+GLG +  GI  P+
Sbjct: 161 IGAKLLLQMGFEPGKGLGKQLQGISTPV 188


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 641 KEESQDSSLVDYKNREYKREASSQSD 666
           K +  DS++    N EYKR  S +S+
Sbjct: 437 KRKLSDSTMNKINNHEYKRSVSRESN 462


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 694 PPGVIAPMPPNILPGPKLAKIDE 716
           PP    P PP    GP  AK+D+
Sbjct: 338 PPKPAPPPPPPSSSGPDSAKLDK 360


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.129    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,783
Number of Sequences: 429
Number of extensions: 9424
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 6
length of query: 945
length of database: 140,377
effective HSP length: 64
effective length of query: 881
effective length of database: 112,921
effective search space: 99483401
effective search space used: 99483401
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 48 (23.4 bits)