Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001448-TA|BGIBMGA001448-PA|IPR000467|D111/G-patch,
IPR008162|Inorganic pyrophosphatase
(945 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52120.1 68416.m05721 SWAP (Suppressor-of-White-APricot)/surp... 98 2e-20
At3g54230.1 68416.m05994 zinc finger protein-related / D111/G-pa... 51 3e-06
At5g26610.2 68418.m03181 D111/G-patch domain-containing protein ... 50 6e-06
At5g26610.1 68418.m03180 D111/G-patch domain-containing protein ... 50 6e-06
At2g42330.1 68415.m05239 D111/G-patch domain-containing protein ... 48 3e-05
At3g52350.1 68416.m05754 D111/G-patch domain-containing protein ... 47 7e-05
At3g09850.1 68416.m01175 D111/G-patch domain-containing protein ... 46 2e-04
At1g17070.1 68414.m02077 D111/G-patch domain-containing protein ... 46 2e-04
At5g08535.2 68418.m01015 D111/G-patch domain-containing protein ... 44 5e-04
At5g08535.1 68418.m01014 D111/G-patch domain-containing protein ... 44 5e-04
At3g57910.1 68416.m06455 D111/G-patch domain-containing protein ... 42 0.001
At2g24830.1 68415.m02970 zinc finger (CCCH-type) family protein ... 40 0.006
At1g10300.1 68414.m01160 GTP-binding protein-related contains si... 40 0.008
At1g63980.1 68414.m07247 D111/G-patch domain-containing protein ... 39 0.018
At4g34140.1 68417.m04845 D111/G-patch domain-containing protein ... 38 0.024
At1g50920.1 68414.m05725 GTP-binding protein-related similar to ... 37 0.055
At1g30480.1 68414.m03726 DNA-damage-repair/toleration protein, c... 36 0.13
At4g25020.1 68417.m03589 KOW domain-containing protein / D111/G-... 34 0.39
At5g58070.1 68418.m07267 lipocalin, putative similar to temperat... 33 0.89
At5g16500.1 68418.m01928 protein kinase family protein contains ... 33 0.89
At4g21010.1 68417.m03040 transcription initiation factor-related... 32 1.6
At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar... 32 1.6
At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99... 32 1.6
At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99... 32 1.6
At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99... 32 1.6
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 31 2.7
At4g25730.1 68417.m03703 FtsJ-like methyltransferase family prot... 31 2.7
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 31 2.7
At1g27750.1 68414.m03391 ubiquitin system component Cue domain-c... 31 2.7
At3g60300.1 68416.m06740 RWD domain-containing protein contains ... 31 3.6
At3g20750.1 68416.m02625 zinc finger (GATA type) family protein 31 3.6
At2g27650.1 68415.m03351 ubiquitin carboxyl-terminal hydrolase-r... 31 3.6
At1g26150.1 68414.m03192 protein kinase family protein similar t... 31 3.6
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 31 4.8
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 31 4.8
At3g49140.1 68416.m05370 pentatricopeptide (PPR) repeat-containi... 30 6.3
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 30 6.3
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 30 8.3
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 30 8.3
At4g13810.1 68417.m02140 disease resistance family protein / LRR... 30 8.3
At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 prot... 30 8.3
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP... 30 8.3
>At3g52120.1 68416.m05721 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / D111/G-patch
domain-containing protein contains Pfam profiles
PF01585: G-patch domain, PF01805: Surp module
Length = 443
Score = 98.3 bits (234), Expect = 2e-20
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 823 HHIGDFLPPEELKKFMEKYSALKNGKEPDLSDYKEFKLKEDNVGFKMLQKLGWNEGQGLG 882
HH+GD++P EEL KF+ K + K + K K++ DNVG K+L K+GW EG+G+G
Sbjct: 322 HHMGDYIPLEELDKFLSKCNDAAAQKATKEAAEKA-KIQADNVGHKLLSKMGWKEGEGIG 380
Query: 883 VEGSGIVEPINKAKQPVQNLGLGASTSDVVSPDDDEFDAYRKRMML 928
G+ +PI NLG+GAS V P+DD ++ Y+KRMML
Sbjct: 381 SSRKGMADPIMAGDVKTNNLGVGASAPGEVKPEDDIYEQYKKRMML 426
>At3g54230.1 68416.m05994 zinc finger protein-related / D111/G-patch
domain-containing protein / RNA recognition motif
(RRM)-containing protein KIAA0122 gene , Homo sapiens,
EMBL:HSDKG02; contains Pfam profiles PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF01585: G-patch domain, weak hit to PF00641: Zn-finger
in Ran binding protein and others
Length = 1105
Score = 51.2 bits (117), Expect = 3e-06
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 856 KEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTSDV 911
+E + E NVG +ML+ +GW+EG GLG +GSG+ EP+ +A+ + GLG+ V
Sbjct: 1020 EERAIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPV-QAQGVDRRAGLGSQQKKV 1074
>At5g26610.2 68418.m03181 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 301
Score = 50.4 bits (115), Expect = 6e-06
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 857 EFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTSD 910
+ K+ NVGF++LQK+GW +G+GLG + GI EPI + + LGLG D
Sbjct: 61 DVKISSSNVGFRLLQKMGW-KGKGLGKQEQGITEPIKSGIRD-RRLGLGKQEED 112
>At5g26610.1 68418.m03180 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 301
Score = 50.4 bits (115), Expect = 6e-06
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 857 EFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTSD 910
+ K+ NVGF++LQK+GW +G+GLG + GI EPI + + LGLG D
Sbjct: 61 DVKISSSNVGFRLLQKMGW-KGKGLGKQEQGITEPIKSGIRD-RRLGLGKQEED 112
>At2g42330.1 68415.m05239 D111/G-patch domain-containing protein
similar to SP|Q9ERA6 Tuftelin-interacting protein 11
{Mus musculus}; contains Pfam profile PF01585: G-patch
domain
Length = 752
Score = 48.0 bits (109), Expect = 3e-05
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 767 KKRQEAERLAAAGKHKYEYDSDEDTTDGTWEHKLRAKE--MFATEKWADELTRQAAGKHH 824
+KR++ + A G +E DS+ D + G+ K R + F++ D++ +Q G
Sbjct: 8 EKRRQTKEDAVYG-FVFESDSNSDDSGGSRRKKRRKTKPVKFSSAGNIDQVLKQNRGNCK 66
Query: 825 IGD----FLPPEELKKFMEK-YSALKNGKEPDLSDYKEFKLKEDNVGFKMLQKLGWNEGQ 879
I + LP KK +K + KN K+ + F+ +G K+L+K+G+ +G+
Sbjct: 67 IDENDDTILPIALGKKIADKAHVREKNNKK------ENFEKFSGGIGMKLLEKMGY-KGR 119
Query: 880 GLGVEGSGIVEPINKAKQPVQNLGLG 905
GLG GIV PI +P +N+G+G
Sbjct: 120 GLGKNQQGIVAPIEVQLRP-KNMGMG 144
>At3g52350.1 68416.m05754 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 180
Score = 46.8 bits (106), Expect = 7e-05
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 860 LKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGA---STSDVVSPDD 916
+ N+GF++L+K GW EG GLG+ GI+ P+ +A+ GLGA + P D
Sbjct: 77 ISSSNIGFQLLKKHGWKEGTGLGITEQGILVPL-QAEPKHNKQGLGAEKPAKRKPAQPQD 135
Query: 917 DEFDAYRKR 925
F+ K+
Sbjct: 136 TAFEEVSKK 144
>At3g09850.1 68416.m01175 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 781
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 853 SDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTS 909
+D F++ G KM+ K+G+ +G GLG +G GI +PI ++P ++LGLG S
Sbjct: 626 ADIGAFEVHTRGFGSKMMAKMGFIDGGGLGKDGKGIAQPIEAVQRP-KSLGLGLDFS 681
Score = 37.5 bits (83), Expect = 0.042
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 858 FKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGA 906
F+ G +M+ ++G+ EG GLG E GIV P+ ++P + G+GA
Sbjct: 732 FEQHTTGFGSRMMARMGFVEGSGLGRESQGIVNPLVAVRRP-RARGIGA 779
>At1g17070.1 68414.m02077 D111/G-patch domain-containing protein
Similar to SP|Q9ERA6 Tuftelin-interacting protein 11
{Mus musculus}; contains Pfam profile PF01585: G-patch
domain
Length = 849
Score = 45.6 bits (103), Expect = 2e-04
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 833 ELKKFMEKYSALKNGKEPDL-SDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEP 891
+++K ++ K GK+ L SD +F+ +G K+L+K+G+ +G GLG GIV P
Sbjct: 170 KVEKRGQEGGGAKGGKKNTLGSDIGQFEKSTKGIGMKLLEKMGY-KGGGLGKNQQGIVAP 228
Query: 892 INKAKQPVQNLGLG 905
I +P +N+G+G
Sbjct: 229 IEAQLRP-KNMGMG 241
>At5g08535.2 68418.m01015 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain; contains
a 2nt micro-exon, as identified using GeneSeqer.
Length = 116
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 860 LKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGA 906
+ N+GF++L+K GW EG GLG+ GI+ P+ +A+ G+GA
Sbjct: 14 INSSNIGFQLLKKHGWKEGTGLGIAEQGILVPL-QAEPKHNKRGVGA 59
>At5g08535.1 68418.m01014 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain; contains
a 2nt micro-exon, as identified using GeneSeqer.
Length = 141
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 860 LKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGA 906
+ N+GF++L+K GW EG GLG+ GI+ P+ +A+ G+GA
Sbjct: 39 INSSNIGFQLLKKHGWKEGTGLGIAEQGILVPL-QAEPKHNKRGVGA 84
>At3g57910.1 68416.m06455 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 265
Score = 42.3 bits (95), Expect = 0.001
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 835 KKFMEKYSALKNGKEPDLSDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPI 892
++ +EK E L+ + + E N+GFK+L+++G+ G LG +GSG EP+
Sbjct: 66 RRRLEKERKQIEEDEQTLARIVDTPIGESNIGFKLLKQMGYKPGSALGKQGSGRAEPV 123
>At2g24830.1 68415.m02970 zinc finger (CCCH-type) family protein /
D111/G-patch domain-containing protein contains Pfam
profiles PF01585: G-patch domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 497
Score = 40.3 bits (90), Expect = 0.006
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 837 FMEKYSALKNGKEPDLSDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPI 892
F+E + L G + D + + +++ + KM+ +G+ EG GLGV G GI+ PI
Sbjct: 276 FLESTN-LPRGVQTDTALFAKWENHTRGIASKMMASMGYREGMGLGVSGQGILNPI 330
>At1g10300.1 68414.m01160 GTP-binding protein-related contains
similarity to nucleolar GTP-binding protein 1 SP: Q9BZE4
from [Homo sapiens];
Length = 687
Score = 39.9 bits (89), Expect = 0.008
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 758 LNLLYQDMLKKRQEAERLAA----AG---KHKYEYD-SDEDTTDGTWEHKLRAKEMFATE 809
LN + M K R + ERL AG K K E D DE+ G + L+ + A E
Sbjct: 389 LNRFHVAMPKSRDDQERLPCIPQVAGEKEKRKTEKDLEDENGGAGVYSASLKKNYILAKE 448
Query: 810 KWADELTRQAAGKHHIGDFLPPEELKKFMEKYS--ALKNGKEPDLS---DYKEFKLKEDN 864
+W D++ + H++ DF+ + L + E S +L+ +E ++ + +E KE N
Sbjct: 449 EWKDDIIPEICDCHNVADFVDSDILNRLEELTSEESLRKAEEEEVGFEIEGEELTEKEKN 508
>At1g63980.1 68414.m07247 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 391
Score = 38.7 bits (86), Expect = 0.018
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 862 EDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTSDVVSPDDDEFDA 921
+D+ FK+++ +GW EG+GLG + GI + + G+G + + D +FD
Sbjct: 15 KDSAAFKLMKSMGWEEGEGLGKDKQGIKGYV-RVTNKQDTSGVGLDKPNPWAFDTTQFDN 73
Query: 922 YRKRM 926
K++
Sbjct: 74 ILKKL 78
>At4g34140.1 68417.m04845 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 418
Score = 38.3 bits (85), Expect = 0.024
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 839 EKYSALKNGKEPD-LSDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQ 897
+++S G E D +++ E + +++ +GW EG+ LG G+VEPI +A
Sbjct: 345 DEHSVPDTGSEEDTVAEALELSFGSGSYARRIMGNMGWKEGETLGKNTKGLVEPI-QAVG 403
Query: 898 PVQNLGLG 905
N+GLG
Sbjct: 404 NTGNVGLG 411
>At1g50920.1 68414.m05725 GTP-binding protein-related similar to
GTP-binding protein SP:Q99ME9 from [Mus musculus]
Length = 671
Score = 37.1 bits (82), Expect = 0.055
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 771 EAERLAAAGKHKYEYDSDEDTTD-GTWEHKLRAKEMFATEKWADELTRQAAGKHHIGDFL 829
+A+ AA K K E D +E+ G + L+ + ++W +++ + H++ DF+
Sbjct: 395 KAKEAAAMEKRKTEKDLEEENGGAGVYSASLKKNYILQHDEWKEDIMPEILDGHNVADFI 454
Query: 830 PPEELKKFME 839
P+ L++ E
Sbjct: 455 DPDILQRLAE 464
>At1g30480.1 68414.m03726 DNA-damage-repair/toleration protein,
chloroplast (DRT111) nearly identical to SP|P42698
DNA-damage-repair/toleration protein DRT111, chloroplast
precursor {Arabidopsis thaliana}; contains Pfam profiles
PF01585: G-patch domain, PF00076: RNA recognition motif.
(a.k.a. RRM, RBD, or RNP domain)
Length = 387
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 868 KMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTSD 910
+M+ K+GW +GQGLG GI P+ AK+ + G+ + S+
Sbjct: 220 RMMAKMGWKQGQGLGKSEQGITTPL-MAKKTDRRAGVIVNASE 261
>At4g25020.1 68417.m03589 KOW domain-containing protein /
D111/G-patch domain-containing protein contains Pfam
profiles PF01585: G-patch domain, PF00467: KOW motif
Length = 375
Score = 34.3 bits (75), Expect = 0.39
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 831 PEELKKFMEKYSALKNGKEPDLSDYKEFK-LKEDNVGFKMLQKLGWNEGQGLGVEGSGIV 889
PE ++K + K PD + ++F+ D G +L GW GQG+G++ V
Sbjct: 107 PEPVEKMLLKSMRTDLESLPDAPEKEDFESFPVDGFGEALLAGYGWKPGQGIGLKAKEDV 166
Query: 890 EPINKAKQPVQNLGLGASTSD 910
+ + K N G G SD
Sbjct: 167 KIVEYEKWS-GNEGFGFGKSD 186
>At5g58070.1 68418.m07267 lipocalin, putative similar to temperature
stress-induced lipocalin [Triticum aestivum] GI:18650668
Length = 186
Score = 33.1 bits (72), Expect = 0.89
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 585 YLWILHNTDSKEYKMFRELVDN-IRKGFDKKPVVK-PEDKYEPEFSLEDDDS 634
YLWIL T E + +++LV+ + +G+D + K P+ PE + +DS
Sbjct: 123 YLWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNTAPEDS 174
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 33.1 bits (72), Expect = 0.89
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 119 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNINTNS 178
KK ++Q+E +DS+ + + ++ +E+ + ++ R + S RR S+D N +
Sbjct: 426 KKRQEQEETATDSDDESDSNSEKDQEEEQSQLEKARESSSSSSDSGSERR-SIDETNATA 484
Query: 179 IPSLMQFPVRQPKDSEEQDNWKSKTDGDSDSNSE 212
+ + SEE+DN K + SN E
Sbjct: 485 QSLKISY---SNYSSEEEDNEKLSSKSSCKSNEE 515
>At4g21010.1 68417.m03040 transcription initiation factor-related
contains weak similarity to Transcription initiation
factor IIE, beta subunit (TFIIE-beta)
(Swiss-Prot:P29084) [Homo sapiens]
Length = 275
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 564 EVASNGDHWENV---LKAIHSQDQYLWILHNTDSKEYKMFRELVDNIRKGFDKKPVVK-- 618
+V+ D + NV LK++ S + W+L NTDSKE ++R ++ + + K + +
Sbjct: 150 DVSDLKDAYPNVMEDLKSLKSSGEIFWLLSNTDSKEGTVYRNNMEYPKIDDELKALFRDI 209
Query: 619 -PEDKYEPEFSL 629
P D E E L
Sbjct: 210 IPSDMLEVEKEL 221
>At2g33730.1 68415.m04134 DEAD box RNA helicase, putative similar to
SP|P23394 Pre-mRNA splicing factor RNA helicase PRP28
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00270: DEAD/DEAH box helicase, PF00271: Helicase
conserved C-terminal domain
Length = 733
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 120 KPEKQDEDNSDSNTQRRHSGDRGREKYR---RWTDRGRNR 156
+PE +D N D+N + DR R++ R R DRGR+R
Sbjct: 59 EPETEDVSNGDTNRDKDRDRDRDRDRERDRDRERDRGRDR 98
>At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 494 SGNCPPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRKPKETNPGDVPPPPS-NATQD 552
+G+CP R+ PP T + S + QN KP + PP + N +Q
Sbjct: 333 TGHCPDRIALPPPTYATQSMRNSPR----TSRSTSFQN-KPYDNGVSSTPPSTTHNESQQ 387
Query: 553 AFPPSVYRAANEVASNGDH 571
F P +A +A N H
Sbjct: 388 QFCPVCLVSAKNMAFNCGH 406
>At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 453
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 494 SGNCPPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRKPKETNPGDVPPPPS-NATQD 552
+G+CP R+ PP T + S + QN KP + PP + N +Q
Sbjct: 353 TGHCPDRIALPPPTYATQSMRNSPR----TSRSTSFQN-KPYDNGVSSTPPSTTHNESQQ 407
Query: 553 AFPPSVYRAANEVASNGDH 571
F P +A +A N H
Sbjct: 408 QFCPVCLVSAKNMAFNCGH 426
>At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 494 SGNCPPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQNRKPKETNPGDVPPPPS-NATQD 552
+G+CP R+ PP T + S + QN KP + PP + N +Q
Sbjct: 333 TGHCPDRIALPPPTYATQSMRNSPR----TSRSTSFQN-KPYDNGVSSTPPSTTHNESQQ 387
Query: 553 AFPPSVYRAANEVASNGDH 571
F P +A +A N H
Sbjct: 388 QFCPVCLVSAKNMAFNCGH 406
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 687 PPPADIKPPGVIAPMPPNILPGP 709
PPP I PP + +P PP I P P
Sbjct: 75 PPPPPIYPPPIYSPPPPPIYPPP 97
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 687 PPPADIKPPGVIAPMPPNILPGPKL 711
PPP I PP + +P P I P PK+
Sbjct: 88 PPPPPIYPPPIYSPPPTPISPPPKV 112
>At4g25730.1 68417.m03703 FtsJ-like methyltransferase family protein
contains Pfam profile: PF01728 FtsJ-like
methyltransferase
Length = 821
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 607 IRKGF--DKKPVVKPEDKYEPEFSLEDDDSGDNRRIKEESQDSSLVDYKNREYKR 659
IRK +KK V KPE P+ ED+++ D++ + E + ++ VD K ++ K+
Sbjct: 321 IRKALTPEKKEVAKPE----PDVGKEDEENEDDKLLNELEELTNTVDRKKKQAKK 371
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 31.5 bits (68), Expect = 2.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 687 PPPADIKPPGVIAPMPPNILPGP 709
PPPA + PP V AP P ++ P P
Sbjct: 146 PPPAPVSPPPVQAPSPISLPPAP 168
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 498 PPRMPFRPPNSVTPNSHESGKIXXXXXXXXXXQN--RKPKETNPGDVPPPPSNATQDAFP 555
PP P PP +VTP S + K+ + P + P PPP S P
Sbjct: 66 PPASPVTPPPAVTPTSPPAPKVAPVISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSP 125
Query: 556 P 556
P
Sbjct: 126 P 126
>At1g27750.1 68414.m03391 ubiquitin system component Cue
domain-containing protein very low similarity to ASC-1
complex subunit P100 [Homo sapiens] GI:12061187; contains
Pfam profile PF02845: CUE domain
Length = 1973
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 119 KKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRN 155
+K + +NS+ NT+ + G RGR + RR GRN
Sbjct: 1919 EKSNESSNNNSEVNTEAENGGGRGRGRGRRGGGGGRN 1955
>At3g60300.1 68416.m06740 RWD domain-containing protein contains
weak similarity to RING finger protein 25 (RING finger
protein AO7) (Swiss-Prot:Q9QZR0) [Mus musculus]
Length = 366
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 116 EAVKKPEKQDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSP 160
EA + E+ +E+ ++ ++ S R RW RGR+R + P
Sbjct: 294 EAGESQEQGEEEPKEAESETNSSSSTNRRGRGRWRGRGRSRGRGP 338
>At3g20750.1 68416.m02625 zinc finger (GATA type) family protein
Length = 208
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 700 PMPPNILPGPKLAKIDEEGVKLTTVNRNNQALMQYAMTNYGRTNLNPDEWKQC 752
PMPP+ P P+ + +E V + R + MTN + N P + C
Sbjct: 93 PMPPSPAPAPETPPVSDEYVLIDVPARRARRNNSTVMTNSWKENATPKRIRGC 145
>At2g27650.1 68415.m03351 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF04780:
Protein of unknown function (DUF629), PF04781: Protein
of unknown function (DUF627)
Length = 1106
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 551 QDAFPPSVYRAANEVASNGDHWENV-----LKAIHSQDQYLWILHNTDSKEYKMFREL 603
+DA +Y A + +NGDH + + + +H +D+ WILH S++ +MF +L
Sbjct: 8 EDAERVKLYNDARALFANGDHIKALEIIEDIILVHKEDEKSWILH---SEQGEMFNDL 62
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 687 PPPADIKPPGVIAPMPP-NILPGPKL 711
PPP PP + AP PP N LP PKL
Sbjct: 147 PPPPPESPPSLPAPDPPSNPLPPPKL 172
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 790 DTTDGTWEHKLRAKEMFATEKWADELTRQAAGKHHI----GDFLPPEELKKFMEKYSALK 845
D + WE K K + + W + L R + H+ G++L +LK+ +++YS
Sbjct: 217 DDSQYVWESKANGKFAVSEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRYSEFI 276
Query: 846 N 846
N
Sbjct: 277 N 277
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 790 DTTDGTWEHKLRAKEMFATEKWADELTRQAAGKHHI----GDFLPPEELKKFMEKYSALK 845
D + WE K K + + W + L R + H+ G++L +LK+ +++YS
Sbjct: 217 DDSQYVWESKANGKFAVSEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRYSEFI 276
Query: 846 N 846
N
Sbjct: 277 N 277
>At3g49140.1 68416.m05370 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1229
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 573 ENVLKAIHSQDQYLWILHNTDSKEYKMFRELVDNIRKGFDKKPVVKPEDKY---EPEFSL 629
E+V++++ S++ Y+ + H + ++++ GFD ++K + + +F
Sbjct: 886 EDVMQSVTSENNYVLLKHVSSDDVMDALQQVI----VGFDTMEMIKEMELMGLSDSDFET 941
Query: 630 EDDDSGDN 637
EDD+SGD+
Sbjct: 942 EDDESGDD 949
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 601 RELVDNIRKGFDKKPVVKPEDKYE-PEFSLEDD 632
R ++D+ ++ FD +P KP + + P+F EDD
Sbjct: 335 RAVLDSAKESFDYRPYTKPVNNFRFPKFYFEDD 367
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 29.9 bits (64), Expect = 8.3
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 595 KEYKMFRELVDNIRKGFDKKPVVKPEDKYEPEFS---LEDDDSGDNRRIKEES 644
KE K + ++ DK+ V K + EPE + EDDD RR KEE+
Sbjct: 152 KEKKKKKSKSKSVEADDDKEKVSKKRKRSEPEETKEETEDDDEESKRRKKEEN 204
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 687 PPPADIKPPGVIAPMPPNILPGPKLA 712
PPP I PP ++P PP I P P LA
Sbjct: 113 PPPPAITPP--LSPPPPAITPPPPLA 136
>At4g13810.1 68417.m02140 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 741
Score = 29.9 bits (64), Expect = 8.3
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 124 QDEDNSDSNTQRRHSGDRGREKYRRWTDRGRNRAQSPITPVVVRRESVDNINTNSIPSLM 183
Q D S + G+ G+ + W + NR + PI P + ++ D+ + P L
Sbjct: 614 QSLDLSQNRLSGSIPGELGKLTFLEWMNFSHNRLEGPI-PETTQIQTQDSSSFTENPGLC 672
Query: 184 QFPVRQPKDSEEQDNWKSKTDGDSDSNSE 212
P+ + EE+ +K + D D E
Sbjct: 673 GAPLLKKCGGEEE---ATKQEQDEDKEEE 698
>At3g44050.1 68416.m04718 kinesin motor protein-related KLP2
protein, Xenopus laevis, PIR:T30335
Length = 1229
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 743 NLNPDEWKQCEDNFKLNLLYQDMLKKRQEAERLAAAGKHKYEYDSDEDT 791
NL + ++N KL LY++ +K++ E +RL ++ K +++ DT
Sbjct: 814 NLENQLTEMHDENEKLMSLYENAMKEKDELKRLLSSPDQKKPIEANSDT 862
>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1367
Score = 29.9 bits (64), Expect = 8.3
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 136 RHSGDRGREKYRRWTDRGRNRAQSPITPVV--VRRESVDNINTNS---IPSLMQFPVRQP 190
RHSG +Y + TD + VV V E V+ TNS +P + R
Sbjct: 286 RHSGTI---RYMKETDSSSEKDAEGSQEVVESVSAEKVEVTKTNSKSKLPVIGGASFRSE 342
Query: 191 KD-SEEQDNWKSKTDGDSDSNSEQG 214
KD S D + TD + D NS+QG
Sbjct: 343 KDQSSPSDLGEEGTDSEDDINSDQG 367
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.309 0.129 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,781,373
Number of Sequences: 28952
Number of extensions: 712520
Number of successful extensions: 2742
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 2683
Number of HSP's gapped (non-prelim): 88
length of query: 945
length of database: 12,070,560
effective HSP length: 88
effective length of query: 857
effective length of database: 9,522,784
effective search space: 8161025888
effective search space used: 8161025888
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 64 (29.9 bits)
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