Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001447-TA|BGIBMGA001447-PA|IPR010844|Occludin and RNA
polymerase II elongation factor ELL
(472 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ138848-1|ABA86454.1| 1047|Drosophila melanogaster CG32217 prot... 113 7e-25
BT023955-1|ABB36459.1| 808|Drosophila melanogaster AT31092p pro... 113 7e-25
AF416770-1|AAL13036.1| 1060|Drosophila melanogaster ELL protein. 113 7e-25
AE014296-3241|AAF49098.3| 1059|Drosophila melanogaster CG32217-P... 113 7e-25
AY061161-1|AAL28709.1| 430|Drosophila melanogaster LD12812p pro... 74 5e-13
AY121714-1|AAM52041.1| 987|Drosophila melanogaster SD05215p pro... 36 0.12
AE013599-2397|AAS64824.1| 987|Drosophila melanogaster CG15609-P... 36 0.12
AE013599-2396|AAS64823.1| 987|Drosophila melanogaster CG15609-P... 36 0.12
AE013599-2395|AAF57918.2| 987|Drosophila melanogaster CG15609-P... 36 0.12
Y09430-1|CAA70581.1| 4151|Drosophila melanogaster Kakapo protein. 36 0.16
AY122181-1|AAM52693.1| 1140|Drosophila melanogaster LD39385p pro... 36 0.16
AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short stop/K... 36 0.16
AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P... 36 0.16
AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-P... 36 0.16
AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-P... 36 0.16
AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-P... 36 0.16
AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-P... 36 0.16
AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-P... 36 0.16
AY094815-1|AAM11168.1| 1824|Drosophila melanogaster LD31957p pro... 35 0.28
AE014298-2509|AAF48687.2| 1824|Drosophila melanogaster CG9086-PA... 35 0.28
AY840220-1|AAV90635.1| 649|Drosophila melanogaster Tef protein. 32 1.5
AY840219-1|AAV90634.1| 571|Drosophila melanogaster truncated Te... 32 1.5
AY840216-1|AAV90631.1| 631|Drosophila melanogaster truncated Te... 32 1.5
AY051818-1|AAK93242.1| 649|Drosophila melanogaster LD32631p pro... 32 1.5
AE013599-2410|AAF57911.1| 649|Drosophila melanogaster CG8961-PA... 32 1.5
AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p pro... 31 2.6
AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein... 31 2.6
AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subu... 31 2.6
AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA... 31 2.6
AY058645-1|AAL13874.1| 850|Drosophila melanogaster LD34489p pro... 30 6.0
AE013599-3967|AAF47283.2| 850|Drosophila melanogaster CG30420-P... 30 6.0
BT004856-1|AAO45212.1| 372|Drosophila melanogaster RE59371p pro... 30 7.9
AY094820-1|AAM11173.1| 609|Drosophila melanogaster LD34893p pro... 30 7.9
AE013599-2637|AAF57737.2| 609|Drosophila melanogaster CG10915-P... 30 7.9
AE013599-1008|AAF58850.1| 372|Drosophila melanogaster CG12920-P... 30 7.9
>DQ138848-1|ABA86454.1| 1047|Drosophila melanogaster CG32217
protein.
Length = 1047
Score = 113 bits (271), Expect = 7e-25
Identities = 48/83 (57%), Positives = 67/83 (80%)
Query: 101 DLTRRSLKERLIQLLALKPFKKPELYTRLSSEGIKDKERSAVNKILPQISLMKDNCYHLR 160
D++RR+++ERLI LLALK FKKPEL+ RL +EGI+D+ER+ + IL IS M N Y+LR
Sbjct: 366 DVSRRNIRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLR 425
Query: 161 RHIWNDVNEDWPFYTEEEKRMLK 183
R +WNDV+E+WPF++E+E + LK
Sbjct: 426 RQMWNDVDENWPFFSEQEVQQLK 448
Score = 73.7 bits (173), Expect = 5e-13
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 284 RYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP---HHQ 340
+Y PI + +RR YK EF Y EYR+L RV V F L L+ A+ +
Sbjct: 826 QYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYD 885
Query: 341 SIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
I+++IV EY R++ND ++ R +YL KL H+K++V YD+ +
Sbjct: 886 HIKRQIVCEYERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYDKTL 932
>BT023955-1|ABB36459.1| 808|Drosophila melanogaster AT31092p
protein.
Length = 808
Score = 113 bits (271), Expect = 7e-25
Identities = 48/83 (57%), Positives = 67/83 (80%)
Query: 101 DLTRRSLKERLIQLLALKPFKKPELYTRLSSEGIKDKERSAVNKILPQISLMKDNCYHLR 160
D++RR+++ERLI LLALK FKKPEL+ RL +EGI+D+ER+ + IL IS M N Y+LR
Sbjct: 128 DVSRRNIRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLR 187
Query: 161 RHIWNDVNEDWPFYTEEEKRMLK 183
R +WNDV+E+WPF++E+E + LK
Sbjct: 188 RQMWNDVDENWPFFSEQEVQQLK 210
Score = 73.7 bits (173), Expect = 5e-13
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 284 RYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP---HHQ 340
+Y PI + +RR YK EF Y EYR+L RV V F L L+ A+ +
Sbjct: 587 QYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYD 646
Query: 341 SIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
I+++IV EY R++ND ++ R +YL KL H+K++V YD+ +
Sbjct: 647 HIKRQIVCEYERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYDKTL 693
>AF416770-1|AAL13036.1| 1060|Drosophila melanogaster ELL protein.
Length = 1060
Score = 113 bits (271), Expect = 7e-25
Identities = 48/83 (57%), Positives = 67/83 (80%)
Query: 101 DLTRRSLKERLIQLLALKPFKKPELYTRLSSEGIKDKERSAVNKILPQISLMKDNCYHLR 160
D++RR+++ERLI LLALK FKKPEL+ RL +EGI+D+ER+ + IL IS M N Y+LR
Sbjct: 373 DVSRRNIRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLR 432
Query: 161 RHIWNDVNEDWPFYTEEEKRMLK 183
R +WNDV+E+WPF++E+E + LK
Sbjct: 433 RQMWNDVDENWPFFSEQEVQQLK 455
Score = 73.7 bits (173), Expect = 5e-13
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 284 RYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP---HHQ 340
+Y PI + +RR YK EF Y EYR+L RV V F L L+ A+ +
Sbjct: 833 QYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYD 892
Query: 341 SIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
I+++IV EY R++ND ++ R +YL KL H+K++V YD+ +
Sbjct: 893 HIKRQIVCEYERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYDKTL 939
>AE014296-3241|AAF49098.3| 1059|Drosophila melanogaster CG32217-PA
protein.
Length = 1059
Score = 113 bits (271), Expect = 7e-25
Identities = 48/83 (57%), Positives = 67/83 (80%)
Query: 101 DLTRRSLKERLIQLLALKPFKKPELYTRLSSEGIKDKERSAVNKILPQISLMKDNCYHLR 160
D++RR+++ERLI LLALK FKKPEL+ RL +EGI+D+ER+ + IL IS M N Y+LR
Sbjct: 373 DVSRRNIRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLR 432
Query: 161 RHIWNDVNEDWPFYTEEEKRMLK 183
R +WNDV+E+WPF++E+E + LK
Sbjct: 433 RQMWNDVDENWPFFSEQEVQQLK 455
Score = 73.7 bits (173), Expect = 5e-13
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 284 RYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP---HHQ 340
+Y PI + +RR YK EF Y EYR+L RV V F L L+ A+ +
Sbjct: 832 QYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYD 891
Query: 341 SIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
I+++IV EY R++ND ++ R +YL KL H+K++V YD+ +
Sbjct: 892 HIKRQIVCEYERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYDKTL 938
>AY061161-1|AAL28709.1| 430|Drosophila melanogaster LD12812p
protein.
Length = 430
Score = 73.7 bits (173), Expect = 5e-13
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 284 RYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP---HHQ 340
+Y PI + +RR YK EF Y EYR+L RV V F L L+ A+ +
Sbjct: 203 QYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYD 262
Query: 341 SIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
I+++IV EY R++ND ++ R +YL KL H+K++V YD+ +
Sbjct: 263 HIKRQIVCEYERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYDKTL 309
>AY121714-1|AAM52041.1| 987|Drosophila melanogaster SD05215p
protein.
Length = 987
Score = 35.9 bits (79), Expect = 0.12
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 328 ELKRAQPMSPHHQSIEQRIVEEYRRVSNDAAYQHERR--RVNYLDKKLTHLKRMVHQYDQ 385
+L+ +P SP H+ + ++++ + + + +HE+R +++Y+D +L L+R DQ
Sbjct: 789 KLELKEPGSPSHRLSDPKVLQSFNAIVERVSPKHEKRGDKLSYIDSELEALEREQEAIDQ 848
Query: 386 LIYEIGIKL 394
+ KL
Sbjct: 849 KASNLEAKL 857
>AE013599-2397|AAS64824.1| 987|Drosophila melanogaster CG15609-PC,
isoform C protein.
Length = 987
Score = 35.9 bits (79), Expect = 0.12
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 328 ELKRAQPMSPHHQSIEQRIVEEYRRVSNDAAYQHERR--RVNYLDKKLTHLKRMVHQYDQ 385
+L+ +P SP H+ + ++++ + + + +HE+R +++Y+D +L L+R DQ
Sbjct: 789 KLELKEPGSPSHRLSDPKVLQSFNAIVERVSPKHEKRGDKLSYIDSELEALEREQEAIDQ 848
Query: 386 LIYEIGIKL 394
+ KL
Sbjct: 849 KASNLEAKL 857
>AE013599-2396|AAS64823.1| 987|Drosophila melanogaster CG15609-PB,
isoform B protein.
Length = 987
Score = 35.9 bits (79), Expect = 0.12
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 328 ELKRAQPMSPHHQSIEQRIVEEYRRVSNDAAYQHERR--RVNYLDKKLTHLKRMVHQYDQ 385
+L+ +P SP H+ + ++++ + + + +HE+R +++Y+D +L L+R DQ
Sbjct: 789 KLELKEPGSPSHRLSDPKVLQSFNAIVERVSPKHEKRGDKLSYIDSELEALEREQEAIDQ 848
Query: 386 LIYEIGIKL 394
+ KL
Sbjct: 849 KASNLEAKL 857
>AE013599-2395|AAF57918.2| 987|Drosophila melanogaster CG15609-PA,
isoform A protein.
Length = 987
Score = 35.9 bits (79), Expect = 0.12
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 328 ELKRAQPMSPHHQSIEQRIVEEYRRVSNDAAYQHERR--RVNYLDKKLTHLKRMVHQYDQ 385
+L+ +P SP H+ + ++++ + + + +HE+R +++Y+D +L L+R DQ
Sbjct: 789 KLELKEPGSPSHRLSDPKVLQSFNAIVERVSPKHEKRGDKLSYIDSELEALEREQEAIDQ 848
Query: 386 LIYEIGIKL 394
+ KL
Sbjct: 849 KASNLEAKL 857
>Y09430-1|CAA70581.1| 4151|Drosophila melanogaster Kakapo protein.
Length = 4151
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 278 LDEIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP 337
L +++R+ + S + K E A E E + + T+ E L A+P+S
Sbjct: 3072 LRTLKQRWDAVVSRASDKKIKLEIA--LKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSR 3129
Query: 338 HHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
++I+ ++ EE++ + D + E + LDKK THLK + D ++
Sbjct: 3130 VLETIQAQM-EEHKVLQKDVSTHREAMLL--LDKKGTHLKYFSQKQDVIL 3176
>AY122181-1|AAM52693.1| 1140|Drosophila melanogaster LD39385p
protein.
Length = 1140
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 278 LDEIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP 337
L +++R+ + S + K E A E E + + T+ E L A+P+S
Sbjct: 59 LRTLKQRWDAVVSRASDKKIKLEIA--LKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSR 116
Query: 338 HHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
++I+ ++ EE++ + D + E + LDKK THLK + D ++
Sbjct: 117 VLETIQAQM-EEHKVLQKDVSTHREAMLL--LDKKGTHLKYFSQKQDVIL 163
>AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short stop/Kakapo
long isoform protein.
Length = 5201
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 278 LDEIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP 337
L +++R+ + S + K E A E E + + T+ E L A+P+S
Sbjct: 4118 LRTLKQRWDAVVSRASDKKIKLEIA--LKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSR 4175
Query: 338 HHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
++I+ ++ EE++ + D + E + LDKK THLK + D ++
Sbjct: 4176 VLETIQAQM-EEHKVLQKDVSTHREAMLL--LDKKGTHLKYFSQKQDVIL 4222
>AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH,
isoform H protein.
Length = 8805
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 278 LDEIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP 337
L +++R+ + S + K E A E E + + T+ E L A+P+S
Sbjct: 7722 LRTLKQRWDAVVSRASDKKIKLEIA--LKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSR 7779
Query: 338 HHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
++I+ ++ EE++ + D + E + LDKK THLK + D ++
Sbjct: 7780 VLETIQAQM-EEHKVLQKDVSTHREAMLL--LDKKGTHLKYFSQKQDVIL 7826
>AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-PC,
isoform C protein.
Length = 5160
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 278 LDEIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP 337
L +++R+ + S + K E A E E + + T+ E L A+P+S
Sbjct: 4077 LRTLKQRWDAVVSRASDKKIKLEIA--LKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSR 4134
Query: 338 HHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
++I+ ++ EE++ + D + E + LDKK THLK + D ++
Sbjct: 4135 VLETIQAQM-EEHKVLQKDVSTHREAMLL--LDKKGTHLKYFSQKQDVIL 4181
>AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-PA,
isoform A protein.
Length = 5501
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 278 LDEIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP 337
L +++R+ + S + K E A E E + + T+ E L A+P+S
Sbjct: 4418 LRTLKQRWDAVVSRASDKKIKLEIA--LKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSR 4475
Query: 338 HHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
++I+ ++ EE++ + D + E + LDKK THLK + D ++
Sbjct: 4476 VLETIQAQM-EEHKVLQKDVSTHREAMLL--LDKKGTHLKYFSQKQDVIL 4522
>AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-PE,
isoform E protein.
Length = 5201
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 278 LDEIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP 337
L +++R+ + S + K E A E E + + T+ E L A+P+S
Sbjct: 4118 LRTLKQRWDAVVSRASDKKIKLEIA--LKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSR 4175
Query: 338 HHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
++I+ ++ EE++ + D + E + LDKK THLK + D ++
Sbjct: 4176 VLETIQAQM-EEHKVLQKDVSTHREAMLL--LDKKGTHLKYFSQKQDVIL 4222
>AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-PB,
isoform B protein.
Length = 5390
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 278 LDEIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP 337
L +++R+ + S + K E A E E + + T+ E L A+P+S
Sbjct: 4307 LRTLKQRWDAVVSRASDKKIKLEIA--LKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSR 4364
Query: 338 HHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
++I+ ++ EE++ + D + E + LDKK THLK + D ++
Sbjct: 4365 VLETIQAQM-EEHKVLQKDVSTHREAMLL--LDKKGTHLKYFSQKQDVIL 4411
>AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-PG,
isoform G protein.
Length = 5385
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 278 LDEIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMSP 337
L +++R+ + S + K E A E E + + T+ E L A+P+S
Sbjct: 4307 LRTLKQRWDAVVSRASDKKIKLEIA--LKEATEFHDTLQAFVEWLTQAEKLLSNAEPVSR 4364
Query: 338 HHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLI 387
++I+ ++ EE++ + D + E + LDKK THLK + D ++
Sbjct: 4365 VLETIQAQM-EEHKVLQKDVSTHREAMLL--LDKKGTHLKYFSQKQDVIL 4411
>AY094815-1|AAM11168.1| 1824|Drosophila melanogaster LD31957p
protein.
Length = 1824
Score = 34.7 bits (76), Expect = 0.28
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 107 LKERLIQLLALKPFKKPELYTRLSSEGIKDKERSAVNKILPQISLMK-------DNCYHL 159
L++ +IQLL +KP+ EL +R +G + +++ +++ K Y L
Sbjct: 794 LRKEIIQLLCIKPYSHSEL-SRALPDGNSGNSDNVFEEVINTVAVFKKPVGADSKGVYEL 852
Query: 160 RRHIWNDVNEDWPFYTEEEK 179
+ H+ + N + YT+E+K
Sbjct: 853 KEHLLKEFNMYFYHYTKEDK 872
>AE014298-2509|AAF48687.2| 1824|Drosophila melanogaster CG9086-PA
protein.
Length = 1824
Score = 34.7 bits (76), Expect = 0.28
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 107 LKERLIQLLALKPFKKPELYTRLSSEGIKDKERSAVNKILPQISLMK-------DNCYHL 159
L++ +IQLL +KP+ EL +R +G + +++ +++ K Y L
Sbjct: 794 LRKEIIQLLCIKPYSHSEL-SRALPDGNSGNSDNVFEEVINTVAVFKKPVGADSKGVYEL 852
Query: 160 RRHIWNDVNEDWPFYTEEEK 179
+ H+ + N + YT+E+K
Sbjct: 853 KEHLLKEFNMYFYHYTKEDK 872
>AY840220-1|AAV90635.1| 649|Drosophila melanogaster Tef protein.
Length = 649
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 103 TRRSLKERLIQLLALKPFKKPE-LYTRLSSEGIKDKERSAVNKILPQISLMKDN 155
T ++ ++ Q+ L+P K P+ L T ++ EG+ D+ ++ N I SL K+N
Sbjct: 315 TTKTFPVKITQIDILQPVKLPKTLITPINEEGVSDQVENSTNNINNAQSLPKEN 368
>AY840219-1|AAV90634.1| 571|Drosophila melanogaster truncated Tef
protein.
Length = 571
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 103 TRRSLKERLIQLLALKPFKKPE-LYTRLSSEGIKDKERSAVNKILPQISLMKDN 155
T ++ ++ Q+ L+P K P+ L T ++ EG+ D+ ++ N I SL K+N
Sbjct: 315 TTKTFPVKITQIDILQPVKLPKTLITPINEEGVSDQVENSTNNINNAQSLPKEN 368
>AY840216-1|AAV90631.1| 631|Drosophila melanogaster truncated Tef
protein.
Length = 631
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 103 TRRSLKERLIQLLALKPFKKPE-LYTRLSSEGIKDKERSAVNKILPQISLMKDN 155
T ++ ++ Q+ L+P K P+ L T ++ EG+ D+ ++ N I SL K+N
Sbjct: 315 TTKTFPVKITQIDILQPVKLPKTLITPINEEGVSDQVENSTNNINNAQSLPKEN 368
>AY051818-1|AAK93242.1| 649|Drosophila melanogaster LD32631p
protein.
Length = 649
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 103 TRRSLKERLIQLLALKPFKKPE-LYTRLSSEGIKDKERSAVNKILPQISLMKDN 155
T ++ ++ Q+ L+P K P+ L T ++ EG+ D+ ++ N I SL K+N
Sbjct: 315 TTKTFPVKITQIDILQPVKLPKTLITPINEEGVSDQVENSTNNINNAQSLPKEN 368
>AE013599-2410|AAF57911.1| 649|Drosophila melanogaster CG8961-PA
protein.
Length = 649
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 103 TRRSLKERLIQLLALKPFKKPE-LYTRLSSEGIKDKERSAVNKILPQISLMKDN 155
T ++ ++ Q+ L+P K P+ L T ++ EG+ D+ ++ N I SL K+N
Sbjct: 315 TTKTFPVKITQIDILQPVKLPKTLITPINEEGVSDQVENSTNNINNAQSLPKEN 368
>AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p
protein.
Length = 1238
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 306 TEYRELYARVAQVAALFTRLENELKRAQPMSPHHQSIEQRIVEEYRRVSNDA 357
++ R+L ++A V AL R E+E++ ++E+ +V+EY R+ +A
Sbjct: 354 SDIRKLEKQLADVEALKKRFEDEIENESQRRGKSVNMEEGLVQEYDRLKQEA 405
>AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein
protein.
Length = 1238
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 306 TEYRELYARVAQVAALFTRLENELKRAQPMSPHHQSIEQRIVEEYRRVSNDA 357
++ R+L ++A V AL R E+E++ ++E+ +V+EY R+ +A
Sbjct: 354 SDIRKLEKQLADVEALKKRFEDEIENESQRRGKSVNMEEGLVQEYDRLKQEA 405
>AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subunit
protein.
Length = 1238
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 306 TEYRELYARVAQVAALFTRLENELKRAQPMSPHHQSIEQRIVEEYRRVSNDA 357
++ R+L ++A V AL R E+E++ ++E+ +V+EY R+ +A
Sbjct: 354 SDIRKLEKQLADVEALKKRFEDEIENESQRRGKSVNMEEGLVQEYDRLKQEA 405
>AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA
protein.
Length = 1238
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 306 TEYRELYARVAQVAALFTRLENELKRAQPMSPHHQSIEQRIVEEYRRVSNDA 357
++ R+L ++A V AL R E+E++ ++E+ +V+EY R+ +A
Sbjct: 354 SDIRKLEKQLADVEALKKRFEDEIENESQRRGKSVNMEEGLVQEYDRLKQEA 405
>AY058645-1|AAL13874.1| 850|Drosophila melanogaster LD34489p
protein.
Length = 850
Score = 30.3 bits (65), Expect = 6.0
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 277 DLDEIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMS 336
D D +ERR +S R +NE +L + +L ++ +RLE EL++ + S
Sbjct: 284 DEDCMERRRA--AASRYRNKMRNEHKDLIKQNAQLQQENQELHERISRLEKELQQHRSHS 341
Query: 337 PHHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLIYEIGIKL 394
+ +R ++ V + + Q +++ +R+ Q+DQ ++EI +K+
Sbjct: 342 SLAGGLRRRPIQP--PVMDPQSEQEYAFLAQMMEQYAR--RRLQQQFDQQLHEINLKM 395
>AE013599-3967|AAF47283.2| 850|Drosophila melanogaster CG30420-PA,
isoform A protein.
Length = 850
Score = 30.3 bits (65), Expect = 6.0
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 277 DLDEIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVAQVAALFTRLENELKRAQPMS 336
D D +ERR +S R +NE +L + +L ++ +RLE EL++ + S
Sbjct: 284 DEDCMERRRA--AASRYRNKMRNEHKDLIKQNAQLQQENQELHERISRLEKELQQHRSHS 341
Query: 337 PHHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKLTHLKRMVHQYDQLIYEIGIKL 394
+ +R ++ V + + Q +++ +R+ Q+DQ ++EI +K+
Sbjct: 342 SLAGGLRRRPIQP--PVMDPQSEQEYAFLAQMMEQYAR--RRLQQQFDQQLHEINLKM 395
>BT004856-1|AAO45212.1| 372|Drosophila melanogaster RE59371p
protein.
Length = 372
Score = 29.9 bits (64), Expect = 7.9
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 14/110 (12%)
Query: 280 EIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVA---QVAALFTR---LENELKRAQ 333
E + P+TS R + F E YT R AR + AA+ +EN+
Sbjct: 257 EFRSKLNPLTSMAFRIVGRG-FFEKYTNARNPMARATSFGECAAVNPECIFVENDNGEEN 315
Query: 334 PMSPHHQSI-----EQRIVEEYRRVS--NDAAYQHERRRVNYLDKKLTHL 376
P S HQ EQ + EE N+ Q ERRR + ++KL+ +
Sbjct: 316 PESEAHQEADQQQEEQAVTEESAAEDSQNEINLQAERRRAKHKNRKLSSI 365
>AY094820-1|AAM11173.1| 609|Drosophila melanogaster LD34893p
protein.
Length = 609
Score = 29.9 bits (64), Expect = 7.9
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 314 RVAQVAALFTRLENELKRAQPMSPHHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKL 373
++A L +R E+ + AQ Q IEQ++ ++Y+ VS A H R VN L + L
Sbjct: 135 KIALNGNLISR-ESSTQAAQAEMEVRQIIEQQMEQQYQMVSKQRA-THV-RMVNILTESL 191
Query: 374 THLKRMVHQYDQ 385
+ +RM+ + ++
Sbjct: 192 ENNQRMLQELEE 203
>AE013599-2637|AAF57737.2| 609|Drosophila melanogaster CG10915-PA
protein.
Length = 609
Score = 29.9 bits (64), Expect = 7.9
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 314 RVAQVAALFTRLENELKRAQPMSPHHQSIEQRIVEEYRRVSNDAAYQHERRRVNYLDKKL 373
++A L +R E+ + AQ Q IEQ++ ++Y+ VS A H R VN L + L
Sbjct: 135 KIALNGNLISR-ESSTQAAQAEMEVRQIIEQQMEQQYQMVSKQRA-THV-RMVNILTESL 191
Query: 374 THLKRMVHQYDQ 385
+ +RM+ + ++
Sbjct: 192 ENNQRMLQELEE 203
>AE013599-1008|AAF58850.1| 372|Drosophila melanogaster CG12920-PA
protein.
Length = 372
Score = 29.9 bits (64), Expect = 7.9
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 14/110 (12%)
Query: 280 EIERRYPPITSSGMRRAYKNEFAELYTEYRELYARVA---QVAALFTR---LENELKRAQ 333
E + P+TS R + F E YT R AR + AA+ +EN+
Sbjct: 257 EFRSKLNPLTSMAFRIVGRG-FFEKYTNARNPMARATSFGECAAVNPECIFVENDNGEEN 315
Query: 334 PMSPHHQSI-----EQRIVEEYRRVS--NDAAYQHERRRVNYLDKKLTHL 376
P S HQ EQ + EE N+ Q ERRR + ++KL+ +
Sbjct: 316 PESEAHQEADQQQEEQAVTEESAAEDSQNEINLQAERRRAKHKNRKLSSI 365
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.318 0.135 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,160,214
Number of Sequences: 52641
Number of extensions: 734940
Number of successful extensions: 2293
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2271
Number of HSP's gapped (non-prelim): 39
length of query: 472
length of database: 24,830,863
effective HSP length: 88
effective length of query: 384
effective length of database: 20,198,455
effective search space: 7756206720
effective search space used: 7756206720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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