GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001446-TA|BGIBMGA001446-PA|undefined
         (88 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   2.8  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    21   4.9  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/24 (33%), Positives = 17/24 (70%)

Query: 45   EKPGILDFLRSQKRDIPNATAAAV 68
            E P +L ++++Q RD+ +A  A++
Sbjct: 1632 EDPPVLKYIKNQVRDVFHAPIASL 1655


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 15   MVRRELGNLLEEFSTLALSSEQPEKTTNNFEKPGILDFLRSQKRDIPNATAAAVNIV 71
            +V ++  ++LE    L L     EK    F++  +LD   S+          +VNI+
Sbjct: 1676 LVDQKNNSVLEVHQVLQLLDTHVEKLDRLFKEFNVLDTQASELVQTAEMDELSVNII 1732


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.127    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,825
Number of Sequences: 2123
Number of extensions: 2292
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 88
length of database: 516,269
effective HSP length: 54
effective length of query: 34
effective length of database: 401,627
effective search space: 13655318
effective search space used: 13655318
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 41 (20.6 bits)