Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001446-TA|BGIBMGA001446-PA|undefined
(88 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 0.53
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 0.53
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 26 2.8
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 26 2.8
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 26 2.8
AL033514-39|CAA22087.2| 441|Caenorhabditis elegans Hypothetical... 26 3.7
AL031630-15|CAA20994.1| 244|Caenorhabditis elegans Hypothetical... 25 4.9
AF003142-3|AAB54188.1| 739|Caenorhabditis elegans Him-three par... 25 4.9
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 25 6.5
Z29116-1|CAA82367.2| 331|Caenorhabditis elegans Hypothetical pr... 25 6.5
U40409-7|AAA81386.3| 304|Caenorhabditis elegans Hypothetical pr... 25 6.5
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 25 8.6
AC006673-3|AAF39929.1| 861|Caenorhabditis elegans Hypothetical ... 25 8.6
AC006656-2|AAF39880.1| 326|Caenorhabditis elegans Hypothetical ... 25 8.6
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 0.53
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 2 AFANQSTCVSAKEMVRRELG-NLLEEFSTLALSSEQPEKTTNNFE--KPGILDFLRSQKR 58
A N +SA + RE N+LEE + E+ +KTT N E K +L
Sbjct: 1329 ATMNLDNIISASGIATREENTNVLEEEERIQKRVEEFKKTTENLEIQKEVVLTKEEVDNS 1388
Query: 59 DIPNATAAAVNI 70
D+ +AVNI
Sbjct: 1389 DVKEHRTSAVNI 1400
Score = 25.0 bits (52), Expect = 6.5
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 17 RRELGNLLEEFSTLALSSEQPEKTTNNFE--KPGILDFLRSQKRDIPNATAAAVNI 70
R E ++LEE + E+ +KTT N E K +L D+ +AVNI
Sbjct: 1669 REENTDVLEEEERIQKRVEEFKKTTENLEIQKEVVLTKEEVDNSDVKEHRTSAVNI 1724
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 0.53
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 2 AFANQSTCVSAKEMVRRELG-NLLEEFSTLALSSEQPEKTTNNFE--KPGILDFLRSQKR 58
A N +SA + RE N+LEE + E+ +KTT N E K +L
Sbjct: 1329 ATMNLDNIISASGIATREENTNVLEEEERIQKRVEEFKKTTENLEIQKEVVLTKEEVDNS 1388
Query: 59 DIPNATAAAVNI 70
D+ +AVNI
Sbjct: 1389 DVKEHRTSAVNI 1400
Score = 25.0 bits (52), Expect = 6.5
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 17 RRELGNLLEEFSTLALSSEQPEKTTNNFE--KPGILDFLRSQKRDIPNATAAAVNI 70
R E ++LEE + E+ +KTT N E K +L D+ +AVNI
Sbjct: 1669 REENTDVLEEEERIQKRVEEFKKTTENLEIQKEVVLTKEEVDNSDVKEHRTSAVNI 1724
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 26.2 bits (55), Expect = 2.8
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 21 GNLLEEFSTLALSSEQPEKTTNNFEKPGILDFLRSQKR 58
GN T A E+P K +K G L F+R + +
Sbjct: 695 GNTTSRSCTTASEEEKPTKDEKKKKKKGFLSFMRKKDK 732
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 26.2 bits (55), Expect = 2.8
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 21 GNLLEEFSTLALSSEQPEKTTNNFEKPGILDFLRSQKR 58
GN T A E+P K +K G L F+R + +
Sbjct: 695 GNTTSRSCTTASEEEKPTKDEKKKKKKGFLSFMRKKDK 732
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 26.2 bits (55), Expect = 2.8
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 21 GNLLEEFSTLALSSEQPEKTTNNFEKPGILDFLRSQKR 58
GN T A E+P K +K G L F+R + +
Sbjct: 645 GNTTSRSCTTASEEEKPTKDEKKKKKKGFLSFMRKKDK 682
>AL033514-39|CAA22087.2| 441|Caenorhabditis elegans Hypothetical
protein Y75B8A.27 protein.
Length = 441
Score = 25.8 bits (54), Expect = 3.7
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 10 VSAKEMVRRELGNLLEEFSTLALSSEQPEKTTNNFE 45
V K+M+ E G +E L E+ + T NFE
Sbjct: 290 VDGKKMISYETGQCMEGDEALRAQKEKVDVATENFE 325
>AL031630-15|CAA20994.1| 244|Caenorhabditis elegans Hypothetical
protein Y38H6C.16 protein.
Length = 244
Score = 25.4 bits (53), Expect = 4.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 27 FSTLALSSEQPEKTTNNFEKPGILDFLRS 55
++ LAL E E+ NN+EKP L L S
Sbjct: 215 WNKLALPVEYQEQENNNYEKPPGLSTLSS 243
>AF003142-3|AAB54188.1| 739|Caenorhabditis elegans Him-three
paralog protein 3 protein.
Length = 739
Score = 25.4 bits (53), Expect = 4.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 47 PGILDFLRSQKRDIPNATAAAVNIVRILRLKPPDIETE 84
P ILD R+++ D N A N + + L I+TE
Sbjct: 563 PSILDVARAEENDAQNDAQDAQNEIAVEGLADLSIDTE 600
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 25.0 bits (52), Expect = 6.5
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 4 ANQSTCVSAKEMVRRELGNLLEEFSTLALSS-EQPEKTTNNFEKPGILDFLRSQKRDIPN 62
A ST + K L+ + L + + E T + ++ GIL+ S+ + +
Sbjct: 460 ARDSTDLVTKLRAYHSKAQLIPQLQHLKWAGLDLEEGTIRDNKEAGILEPALSKVKSLKF 519
Query: 63 ATAAAVNIVRI 73
AT AA+ I+RI
Sbjct: 520 ATEAAITILRI 530
>Z29116-1|CAA82367.2| 331|Caenorhabditis elegans Hypothetical
protein ZK507.1 protein.
Length = 331
Score = 25.0 bits (52), Expect = 6.5
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 1 MAFANQSTCVSAKEMVRRELGNLLEEFSTLALSSEQPEKTTNNFEKPGILDFLRSQKR 58
+ + NQSTC S + +++S++ E+ + + K G L F S+ +
Sbjct: 269 LVWFNQSTCPSPSTAPGTGASRMATNIDLKSIASDRNEENSLDRSKTGTLSFNNSKNK 326
>U40409-7|AAA81386.3| 304|Caenorhabditis elegans Hypothetical
protein F32A6.2 protein.
Length = 304
Score = 25.0 bits (52), Expect = 6.5
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 57 KRDIPNATAAAV-NIVRILRLKPPDIETE 84
KR+ TA + N++RILR +PP + E
Sbjct: 55 KREAAEETAIRILNMLRILRYRPPQDQDE 83
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 24.6 bits (51), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 38 EKTTNNFEKPGILDFLRSQKRDIPNATAAAVNIVRI 73
E T + ++ GIL+ S+ + + AT AA+ I+RI
Sbjct: 495 EGTIRDNKEAGILEPALSKVKSLKFATEAAITILRI 530
>AC006673-3|AAF39929.1| 861|Caenorhabditis elegans Hypothetical
protein K09D9.11 protein.
Length = 861
Score = 24.6 bits (51), Expect = 8.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 19 ELGNLLEEFSTLALSSEQPEKTTNN 43
E+ +LLE+ +T+ ++E EKT N
Sbjct: 247 EINSLLEQVTTIQNNTENLEKTVRN 271
>AC006656-2|AAF39880.1| 326|Caenorhabditis elegans Hypothetical
protein H12I13.2 protein.
Length = 326
Score = 24.6 bits (51), Expect = 8.6
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 24 LEEFSTLALSSEQPEKTTNNFEKPGILDFLRSQKRDIPNATAAAVNIVRILRL 76
L +F+T + N K ++ LRS D+ + A+NI I+++
Sbjct: 97 LHQFATKPFLERMRDTKDGNRNKVALMFLLRSVFTDLRFSAERAINITSIIKV 149
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.127 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,965,330
Number of Sequences: 27539
Number of extensions: 65088
Number of successful extensions: 155
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 140
Number of HSP's gapped (non-prelim): 18
length of query: 88
length of database: 12,573,161
effective HSP length: 67
effective length of query: 21
effective length of database: 10,728,048
effective search space: 225289008
effective search space used: 225289008
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 51 (24.6 bits)
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