GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001446-TA|BGIBMGA001446-PA|undefined
         (88 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           22   1.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    19   9.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   9.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    19   9.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    19   9.1  

>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 1.3
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 7  STCVSAKEMVRRELGNLLEEFSTLALSSEQPEKTTNNFEKPGIL 50
          S CV+ K  +    GNL  +     +S E+  K    FE+  IL
Sbjct: 14 SRCVT-KAAIAGHDGNLWAKSEGFEVSKEELTKLVQGFEEQDIL 56


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 25  EEFSTLALSSEQPEKTTNNFEKPGILDFLRSQKR 58
           EE     L    PE+   N+  P +LD +++  R
Sbjct: 177 EERQAYYLHQFAPEQPDLNYYNPVVLDDMQNVLR 210


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 25  EEFSTLALSSEQPEKTTNNFEKPGILDFLRSQKR 58
           EE     L    PE+   N+  P +LD +++  R
Sbjct: 177 EERQAYYLHQFAPEQPDLNYYNPVVLDDMQNVLR 210


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 17  RRELGNLLEEFSTLALSSEQPEKTTNNFEKPGILDFLRSQKRDIPNAT 64
           +RE  +    F +L+   +QP     + E   I   + S KR++ N T
Sbjct: 459 KREYYSHYVAFKSLSYLKKQPVIANGSLEVDVIDGRVLSVKRELGNDT 506


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 10/23 (43%), Positives = 11/23 (47%)

Query: 7   STCVSAKEMVRRELGNLLEEFST 29
           + CV   E   R LGN L  F T
Sbjct: 150 TACVGLLERAFRCLGNNLTAFLT 172


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.127    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,176
Number of Sequences: 429
Number of extensions: 767
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 88
length of database: 140,377
effective HSP length: 48
effective length of query: 40
effective length of database: 119,785
effective search space:  4791400
effective search space used:  4791400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.7 bits)
S2: 37 (19.0 bits)