Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001445-TA|BGIBMGA001445-PA|IPR000618|Insect cuticle
protein
(925 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 32 0.32
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 32 0.32
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 32 0.42
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 31 0.74
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 31 0.74
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 31 0.74
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 31 0.74
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 31 0.97
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 31 0.97
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 31 0.97
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 30 1.3
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 30 1.3
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 30 1.3
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 30 1.7
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 29 3.0
SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32 |Schi... 29 3.9
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 29 3.9
SPBP8B7.01c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 3.9
SPAC664.08c |||traub transciption factor family protein |Schizos... 29 3.9
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 6.9
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 6.9
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 28 6.9
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 28 6.9
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 28 6.9
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 28 6.9
SPCC1672.08c |tfa2||transcription factor TFIIE beta subunit Tfa2... 27 9.1
SPBC15C4.03 |||Rab geranylgeranyltransferase escort protein |Sch... 27 9.1
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch... 27 9.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 9.1
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 32.3 bits (70), Expect = 0.32
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 357 TGRTPESFSFNFLEAANSHNNLLAATSPQSPLKSYSETFSEHLKTRQSSTISPQITFLAS 416
T T FN + AAN L+++T PQ+P+ ++ QSS P T +AS
Sbjct: 115 TEATSNERPFNPVSAANLERLLMSSTGPQTPINGELKSNDSQDTAFQSSRNMPSDTSVAS 174
Query: 417 QGAHIPSASTP 427
+S+P
Sbjct: 175 PDYSHSQSSSP 185
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 837 NNLSN-HYEEEPEIDSQEFK-RENKKNMSQEELHGVIRNYKVLQRNNGNFNKERNLNQIR 894
N+LS Y ++ E S E E+ N +E G N + ++ N + +LNQ+
Sbjct: 508 NSLSEISYNQQSECRSSELNVNEDSANQKEESALGTSDNSDMYEKENTPIHHNESLNQLS 567
Query: 895 KDL 897
KDL
Sbjct: 568 KDL 570
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 738 DNLKENIFLKRFFKRQKEEKIVAPKDNADTKSLKEKQVENHPKYIQTDSKKINNENSRPF 797
D KE+I +F K+ E + + + N + S+ EKQ +H + S +++ + +P
Sbjct: 146 DYEKESISSSQFSKKYSEGSLKSQQSNTRSNSVHEKQNTDHASNASSSSSVVSSPSLKPN 205
Query: 798 QASDI 802
S +
Sbjct: 206 NTSPL 210
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 31.1 bits (67), Expect = 0.74
Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 382 TSPQSPLKSYSETFSEHLKTRQSSTISPQITFLASQGAHIPSAST------PQPTITRLN 435
+S SP S+S T + + + +T + Q+T+ S + +T P+ TI+ ++
Sbjct: 532 SSSPSPTSSFSGTSALSSSSNEETTTTTQVTYTTSPEETTTTMTTTTCSSRPEETISTVS 591
Query: 436 EKTTMPQLVNYEAAIKETEPENKNLLKWQYNANKDNNQTPDKNSISRS 483
+T+ + + A+I T P + + + ++ + + +S SRS
Sbjct: 592 TTSTVSESGSSSASITSTYPSSTLSMTTSHLSSSSVHSSSAHSSSSRS 639
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 31.1 bits (67), Expect = 0.74
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 369 LEAANSHNNLLAATSPQSPLKSYSETFSEHLKTRQSSTISPQITFLASQGAHIPSASTPQ 428
L+++N+ ++ AAT + +KSY T S H + IT A+ G P+ S P
Sbjct: 486 LDSSNAPHSQSAATHDLNDVKSYYNTRSSHSVVPNPTNQKVSITGAAADG---PNGSAPV 542
Query: 429 PTITRLNEKTT 439
T T N TT
Sbjct: 543 DT-TPTNSSTT 552
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 31.1 bits (67), Expect = 0.74
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
Query: 735 NFNDNLKENI---FLKRF--FKRQKEEKIVAPKDNADTKSLKEKQVENHPKY 781
NFN N+KE F + F F++++EEK PK+ K++K+K+ E KY
Sbjct: 268 NFNHNIKEFSKCDFTQMFHHFEQKREEKKSMPKE--QKKAIKQKKDEEEEKY 317
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 31.1 bits (67), Expect = 0.74
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 10/125 (8%)
Query: 115 FDTKNNRTEPNTNVFQTQRLDMRSLPKTVEYQHP------IDRIDMKPEIRKPQQFTLNN 168
+D RT N+ Q + R LP+ V+ Q I MKP +R P F L +
Sbjct: 439 YDLFVGRTRSNSKTSSDQSIK-RPLPRVVQRQKTSLGKRGISMSPMKPGLRMPSSFDLQS 497
Query: 169 RQIQNGLPKPPQRNVVVSPEKRND--QGIDQAKSGNFPIPQYLPLPSLFISSTTETAIPI 226
R I G + + K + Q ++ +S + P P+ + PS+ + E+A
Sbjct: 498 RSISMGAFEQLSTPLEAPAHKHSAVLQPLEVNRSISIPPPKSIS-PSILHKPSLESASST 556
Query: 227 LRLSN 231
++S+
Sbjct: 557 PKISS 561
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 635 NNVQRTKIVNSDVENRQYKPESTYLNNSPV----NQQQQYL 671
NN + T + N+ V+N + P S L+NS + NQ++ YL
Sbjct: 124 NNKKATALANASVQNERQMPSSMTLDNSEIKPVLNQRKNYL 164
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 30.7 bits (66), Expect = 0.97
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query: 221 ETAIPILRLSNEMDLDGSFSY------EALGADQTHYVQHSRMENIGNDKQEQVVEGSYS 274
+ +IP+ ++ E+D G+F + E L + + HS E +G D +
Sbjct: 34 QPSIPLSPVAFELDFSGNFQFISDNSSELLDIPKDKIIGHSVAEVLGTDGYNAFMRAVNC 93
Query: 275 YVGDDGQTYSVHYIADANGFRASGDHLPVPPPVP 308
+ DD +Y V + N A+ ++ +P
Sbjct: 94 LLKDDSHSYHVRFQHSINANHANQNYYTAKGDLP 127
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 30.7 bits (66), Expect = 0.97
Identities = 32/161 (19%), Positives = 67/161 (41%), Gaps = 17/161 (10%)
Query: 389 KSYSETFSEHLKTRQSSTISPQIT--FLASQGAHIPSASTPQPTITRLNEKTTMPQLVNY 446
K+ E FS+ + PQ+ F A +G H + TI R++EK P++++
Sbjct: 4 KAVLEAFSDSEDEDEKKLKGPQLITGFSAEEGVHYQNE-----TIQRIHEKKRAPKIIHI 58
Query: 447 EAAIKETEPENKNLLKWQYNANKDNNQTPDKN-------SISRSFGEDDDVMINFNEMTP 499
+ E K + ++ +Q PD ++ S D++++ +
Sbjct: 59 ASDENWMEKRKARFKKKETEVHEKPSQLPDSGLNYGLNIRVASSSAADNEIVDWKANNSN 118
Query: 500 EQYTNMIHSKIETQTLAPRD---SFNEVTGKYQLSNLANIK 537
E+ N I + E+ + P + N++ + +N AN++
Sbjct: 119 EKAQNKIATNKESTDILPEEVQLVLNDLNDDVKSANSANLQ 159
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 400 KTRQSSTISPQITFLASQGAHIPSASTPQPTITRLNEKTT 439
K+R+ +T+ P++ LA GA P+ S PQ +NE T
Sbjct: 82 KSRRENTLLPRLNPLAPIGARQPNPSIPQQFSKPINESGT 121
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 30.3 bits (65), Expect = 1.3
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 305 PPVPEIIQRAVQHNLAE--EARKPAHLKNWNEEDDIYQDTERNTFTILPTHNLYTGRTPE 362
PP P+ + + NL + E L++ E D + E N T T N+ PE
Sbjct: 190 PPAPQDESQGTEINLKQKIEEENDEILEDSKESKD---ENEENKET--STTNVAETDAPE 244
Query: 363 SFSFNFLE--AANSHNNLLAATSPQSPLKSYSETFSEHLKTRQSSTISPQITFLASQGAH 420
+ + +E A +++ + SP S T + + T ST + A A
Sbjct: 245 EETVDTVEEIADEEKHSVKEESGEASPQSSQQSTITS-ISTTTRSTRKAKREAAAEDKAD 303
Query: 421 IPSASTPQPTITR 433
+P+A P+P+ TR
Sbjct: 304 LPAAVAPKPSKTR 316
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 357 TGRTPESFSFNFLEAANSHNNLLAATSPQSPLKSYSETFSEHLKTRQSSTISPQITFLAS 416
T TP S S F+ + ++ TS Q + S S T SE+ S+ S IT ++S
Sbjct: 49 TPETPSSSSSTFVPISTHTSSATNTTSGQLSISSSSSTSSEY------SSSSIPITTVSS 102
Query: 417 QGAHIPSAS 425
+ IPS+S
Sbjct: 103 SDSFIPSSS 111
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Query: 409 PQITFLASQGAHIPSASTPQPTITRLNEKTTMPQLVNYEAAIKETEPENKNLLKWQYNAN 468
P + FL S+G A + + RL T P+ AI++ P K +
Sbjct: 32 PILIFLQSRGTSPNDAIPIKSPLERLANSVTSPEKPTVRTAIQKDSPRRKQI-------- 83
Query: 469 KDNNQTPDKNSISRSF 484
D++QTP K+ + RSF
Sbjct: 84 -DDDQTPPKH-LKRSF 97
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 29.1 bits (62), Expect = 3.0
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 11/136 (8%)
Query: 217 SSTTETAIPILRLSNEMDLDGSFSYEALGADQTHYVQHSRMENIGNDKQEQVVEGSYSYV 276
SS T P+ S++ + S S L ++ ++NI ND + + E S++
Sbjct: 244 SSEDSTLSPLPSRSSDTNDPQSDSQHVLRQERMRIELRQYIKNILNDDELHLTEEVLSFL 303
Query: 277 GDDGQTYSVHYIADANGFRASGDHLPVPPPVPEIIQRAVQHNLAEEARKPAHLKNWNEED 336
DD T + + D N FR D +I++ Q E A + A + E+
Sbjct: 304 TDDPVTLTASELTDIN-FRQELD----------VIRQLEQQKFVEIASQRAKELDVYMEE 352
Query: 337 DIYQDTERNTFTILPT 352
TE N FT L T
Sbjct: 353 FKRSLTENNGFTTLFT 368
>SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 749
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 397 EHLKTRQSSTISPQITFLASQGAHIPSASTPQPTITRLNEKTTMPQL 443
E +KTR+ + + +T S GA IP + + I RL + P L
Sbjct: 527 EKVKTREPTVVMGMVTVYISAGAIIPEETVHEQVIPRLWILSVSPSL 573
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 850 DSQEFKRENKKNMSQEELHGVIRNYKVLQRNNGN-FNKERNLNQIRKDLTPSGRKENL 906
DS E K+EN+++ QE+L + L+R N +E+ ++ RK TPS + L
Sbjct: 107 DSLE-KKENERDRLQEKLRALQEESANLRRQRENRLREEQEQSKRRKQETPSSKISEL 163
>SPBP8B7.01c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 102
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 214 LFISSTTETAIPILRLSNEMDLDGSFSYEALGADQTHYVQHS 255
+ I T I R+ ++D+DGS Y+A G H V+ S
Sbjct: 16 IIIRRKTHLIAMIRRMRKKLDIDGSILYQATGMAIPHLVELS 57
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 611 IITQNKFIPPSQTVSQSYD--YIDSNNNVQRTKIVNSDVENRQYKPE 655
I NKF +Q++ Q + I+ + V+RT+I SD N+ + PE
Sbjct: 283 ISQSNKFKALNQSIVQQIENSMINKKDLVERTRIDYSDPNNKTFNPE 329
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 6.9
Identities = 25/112 (22%), Positives = 40/112 (35%)
Query: 698 STANSIEVSDIVARNENNDFSPIXXXXXXXXXXXXXXNFNDNLKENIFLKRFFKRQKEEK 757
ST N E + V ND S +F DN E R +
Sbjct: 907 STRNFTESLNQVKNLIKNDTSNRKPFGAENQSKLKKNSFYDNPSETTEKDATLYRHNDSD 966
Query: 758 IVAPKDNADTKSLKEKQVENHPKYIQTDSKKINNENSRPFQASDIINLISAK 809
A +A + KE+++E+ P I +I + R + S ++N + K
Sbjct: 967 ASAYVSSARRRDFKEEKIESAPPIINDIDSEIASLKKRIHEKSLVVNALEDK 1018
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Query: 336 DDIYQDTERNTFTILPTHNLYTGRTPESFSFNFLEAANSHNNLLAATSPQSPLKSYSETF 395
D ++ + + + T+ L T S + N +++S + ++ P S L +++F
Sbjct: 288 DSVFTTVTATSDSSVITYTLINSVTSSSETTNLPSSSSSLVTIGESSFPSSLLSLLTQSF 347
Query: 396 SEHLKTRQSSTISPQITFLASQGAHIPSASTPQPT 430
S T SST Q+T + + + S S PT
Sbjct: 348 STVRSTSSSST--DQLTSASPISSSVISPSVSSPT 380
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 370 EAANSHNNLLAATSPQSPLKSYSETF-SEHLKTRQSSTISPQITFLASQGAHIP-SASTP 427
++++S N ++ TS SP S SET S + + +S+ S + AS A ST
Sbjct: 192 DSSSSTNTVILTTSVNSPAVSSSETLTSVSITSTESAYTSSSVDIAASTTASSTLPVSTS 251
Query: 428 QPTITRLNEKTTMPQLVNYEAA 449
+ T++ + P ++ A+
Sbjct: 252 EATVSFSTDIPATPSTLSSPAS 273
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 782 IQTDSKKINNENS-RPFQASDIINLISAKNYFES 814
++ + K ++N+NS PFQ DI+ L +++ S
Sbjct: 454 VKLELKSMDNQNSPSPFQGKDILTLAQGASFYNS 487
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 383 SPQSPLKSYSETFSEHLKTRQSSTISPQITFLASQGAHIPSASTPQPTITRLNEKTTMPQ 442
SP P ++ S+HL+ S +S Q T+ A+ A+ + PQ + L+E +PQ
Sbjct: 50 SPFEPERNMQVQSSQHLEANVQSPVSSQTTY-ATPSAY----AVPQESEIELHESEMVPQ 104
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 27.9 bits (59), Expect = 6.9
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 361 PESFSFNFLEAANSHNNLLAA-TSPQSPLKSYSETFSEHLKTRQSSTISPQI---TFLAS 416
P + +F+ +A + N L+ T P+ +S E E +K RQ+S+IS T S
Sbjct: 215 PPTSNFSNRKARYASNGLVQLQTGPKRDKRSAGEVQDEIMKRRQNSSISQAATPRTVSNS 274
Query: 417 QGAHIPSASTPQPTITRLNEKTTMPQLVNYEAAIK-ETEPENKNLLKWQYNANKD-NNQT 474
+ +++ S + Q L T + A K + P ++ + + + N++
Sbjct: 275 ETSYVGSPALKQSKPNSLKSNNTSRKTSASSAITKPKARPHTSRHDEFVVSDDDELNDRV 334
Query: 475 PDKNS-ISRSFGE 486
PD +S I + FG+
Sbjct: 335 PDVSSEIWKIFGK 347
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 27.9 bits (59), Expect = 6.9
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 20/128 (15%)
Query: 597 LFPSNDEGSQVRAKIITQNKFIPPSQTVSQSYDYIDSNNNVQRTKIVNSDVENRQYKPES 656
L+P ND+ S I K +P ++ +D + V + N D+ Q++
Sbjct: 213 LYPENDDLS-----IQNPTKALPEAEKALDVHDA--TREQVNDREETNMDL-TIQFQEAD 264
Query: 657 TYLNNSPVNQQQQYLNWLNINKKNEIFDTRRTDVSSESSYISTAN------SIEVSDIVA 710
++L++S + + L+ +++ ++ + + S + +S+ N SIE+SD
Sbjct: 265 SFLSHS------ESIKGLSSSEQGTVYSLKASHDPSNQTQLSSPNKSSSPTSIEISDFSK 318
Query: 711 RNENNDFS 718
NEN+D S
Sbjct: 319 NNENHDQS 326
>SPCC1672.08c |tfa2||transcription factor TFIIE beta subunit
Tfa2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 285
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 326 PAHLKNWNEEDDIYQDTERNTFTILPTHNLYTG 358
P L + + IY D TFT P HN+ +G
Sbjct: 112 PMLLNLLKKNNRIYYDERNETFTFKPLHNIRSG 144
>SPBC15C4.03 |||Rab geranylgeranyltransferase escort protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 236 DGSFSYEALGADQTHYVQHSRMENIGNDKQEQVVEGSYSYVGDDGQTYSVHYIADAN 292
DG F+ AL A H+ S EN GN Q ++ GS S GD + Y + Y+ N
Sbjct: 333 DGFFA--ALDASLIHFSPFSISENFGNSVQAKLY-GSGS--GDCPEGYCIWYLKTLN 384
>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 777 NHPKYIQTDSKKINNENSRPFQASDIINLISAKNY 811
NHP ++ +N+ +++P SD+I+L +Y
Sbjct: 130 NHPASVENSLTNVNSIHAQPTTISDMIDLTDETSY 164
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/77 (23%), Positives = 31/77 (40%)
Query: 381 ATSPQSPLKSYSETFSEHLKTRQSSTISPQITFLASQGAHIPSASTPQPTITRLNEKTTM 440
A+S SP+ S S S + + + T S S + IP++ IT + T +
Sbjct: 692 ASSSSSPIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTSVNSSTLITASSSNTLL 751
Query: 441 PQLVNYEAAIKETEPEN 457
+ + A + T N
Sbjct: 752 SSITSSSAIVSSTTVSN 768
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.129 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,338,498
Number of Sequences: 5004
Number of extensions: 199878
Number of successful extensions: 632
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 614
Number of HSP's gapped (non-prelim): 37
length of query: 925
length of database: 2,362,478
effective HSP length: 79
effective length of query: 846
effective length of database: 1,967,162
effective search space: 1664219052
effective search space used: 1664219052
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 58 (27.5 bits)
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