GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001445-TA|BGIBMGA001445-PA|IPR000618|Insect cuticle
protein
         (925 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    66   9e-13
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    28   0.40 
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    27   0.70 
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    27   0.70 
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    27   0.70 
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    27   0.70 
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    25   2.1  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    25   2.1  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      25   2.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   4.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   4.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   4.9  
AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex det...    24   6.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   8.6  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    23   8.6  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    23   8.6  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    23   8.6  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    23   8.6  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    23   8.6  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 66.5 bits (155), Expect = 9e-13
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)

Query: 232 EMDLDGSFSYEALGADQTHYVQHSRMENIGNDKQEQVVEGSYSYVGDDGQTYSVHYIADA 291
           E++ DG++      ++   + +  + + + N+    V +GS SY   DGQ  S+ Y+AD 
Sbjct: 35  EVNFDGNYINNFETSNGISHQESGQPKQVDNETPV-VSQGSDSYTAPDGQQVSITYVADE 93

Query: 292 NGFRASGDHLPVPPPVPEIIQRAVQHNLA 320
           NGF+  G H+P  PP+P  IQRA++ N A
Sbjct: 94  NGFQVQGSHIPTAPPIPPEIQRALEWNAA 122


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 831 KTHLNRNNLSNHYEEEPEIDSQEFKRENKKNMSQEELHGVIRNYKVLQRNNGNFNKERNL 890
           K++ N N+   + E   E      +RE  K    + +  +  NYK    NN N     N 
Sbjct: 281 KSYKNENSYRKYRETSKERSRDRKERERSKE--PKIISSLSNNYKYSNYNNYNNYNNNNY 338

Query: 891 NQIRKDL 897
           N   K L
Sbjct: 339 NNYNKKL 345


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.1 bits (57), Expect = 0.70
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 641 KIVNSDVENRQYKPESTYLNNSPVNQQQQYLNWLNINKKNEI 682
           KI++S   N +Y   + Y NN+  N   + L + NIN   +I
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQI 121


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.1 bits (57), Expect = 0.70
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 641 KIVNSDVENRQYKPESTYLNNSPVNQQQQYLNWLNINKKNEI 682
           KI++S   N +Y   + Y NN+  N   + L + NIN   +I
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQI 121


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.1 bits (57), Expect = 0.70
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 641 KIVNSDVENRQYKPESTYLNNSPVNQQQQYLNWLNINKKNEI 682
           KI++S   N +Y   + Y NN+  N   + L + NIN   +I
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQI 121


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.1 bits (57), Expect = 0.70
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 641 KIVNSDVENRQYKPESTYLNNSPVNQQQQYLNWLNINKKNEI 682
           KI++S   N +Y   + Y NN+  N   + L + NIN   +I
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQI 121


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 831 KTHLNRNNLSNHYEEEPEIDSQEFKRENKKNMSQEELHGVIRNYKVLQRNNGNFNKERNL 890
           K++ N      + E   E      +RE  K    + +  +  NYK    NN N N   N 
Sbjct: 48  KSYKNEREYRKYRETSKERSQDRTERETSKE--PKIISSLSNNYKYSNYNNYNNNYNNNY 105

Query: 891 N 891
           N
Sbjct: 106 N 106


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 831 KTHLNRNNLSNHYEEEPEIDSQEFKRENKKNMSQEELHGVIRNYKVLQRNNGNFNKERNL 890
           K++ N      + E   E      +RE  K    + +  +  NYK    NN N N   N 
Sbjct: 48  KSYKNEREYRKYRETSKERSQDRTERETSKE--PKIISSLSNNYKYSNYNNYNNNYNNNY 105

Query: 891 N 891
           N
Sbjct: 106 N 106


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 618 IPPSQTVSQSYDYIDSNNNVQRTKIVNSDVENRQYKPESTYLNNSPVNQQQQY-LNWLNI 676
           I P Q+  QSY ++DS            DVE ++YK         P +  + Y L     
Sbjct: 155 ITPRQS-HQSYHHMDSVEYKPEIMEYKPDVEEQRYKQVEISQMTEPSSSTKSYVLEGPRN 213

Query: 677 NKKNEIFDTRRTDVSSESSYIST 699
            K+     T   +  +ES+  ST
Sbjct: 214 GKRKRKSSTIENESETESNASST 236


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 332 WNEEDDIYQDTERNTFTILPTHNLYTGRTPESFSF--NFLEAANSH 375
           +N  DD +Q    +TF   P +  YT    ESFS     L  A SH
Sbjct: 213 YNNADDSFQRLTSSTFVYDPRYTKYT-INDESFSLQDGILGMALSH 257


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 750 FKRQKEEKIVAPKDNADTKSLKEKQVENHPKYIQTDS 786
           FK+ KEE+    + N+D    +E  +EN      TDS
Sbjct: 159 FKQNKEEEQTINRKNSDYLDNQEVSMENTENKSCTDS 195


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 645 SDVENRQYKPESTYLNNSPVNQQQQYLNWLNINKKNEIFDTRRTDVSSESSYISTA 700
           SDVE R+     T +N++ +      L+      K +I + R TD+SS SS IS++
Sbjct: 330 SDVEERRVS--KTAMNSNQIVSDNS-LSSSEEKLKQDILNLR-TDISSSSSSISSS 381


>AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 835 NRNNLSNHYEEEPEID-SQEFKRENKKNMSQEELHGVIRNYKVLQRNNGNFNKERNLNQ 892
           +R+   N Y  + E   S++  RE KK+   ++LH V   +   + +   +++ R   Q
Sbjct: 237 SRHEDRNSYRNDGERSCSRDRSREYKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQ 295


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 212 PSLFISSTTETAIPILRLSNEMDLDGSFSYEALGADQTHYVQHSRMENIGNDKQEQVV 269
           PS+FIS   +    I+++SN  + +G    +    D    +  S M  I N + ++ V
Sbjct: 403 PSIFISDDNQKLTGIVQISNMTEYNGLTEPK---KDNKRKLSDSTMNKINNHEYKRSV 457


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 747 KRFFKRQKEEKIVAPKDNADTKSLKEKQVENHPKYIQTDSKKINNENSRPFQASDIINLI 806
           K+ +K +   +         ++  KE++    PK I + S K  + N+  ++     N+ 
Sbjct: 47  KKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI- 105

Query: 807 SAKNYFE 813
              NY E
Sbjct: 106 ---NYIE 109


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 747 KRFFKRQKEEKIVAPKDNADTKSLKEKQVENHPKYIQTDSKKINNENSRPFQASDIINLI 806
           K+ +K +   +         ++  KE++    PK I + S K  + N+  ++     N+ 
Sbjct: 47  KKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI- 105

Query: 807 SAKNYFE 813
              NY E
Sbjct: 106 ---NYIE 109


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 747 KRFFKRQKEEKIVAPKDNADTKSLKEKQVENHPKYIQTDSKKINNENSRPFQASDIINLI 806
           K+ +K +   +         ++  KE++    PK I + S K  + N+  ++     N+ 
Sbjct: 47  KKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI- 105

Query: 807 SAKNYFE 813
              NY E
Sbjct: 106 ---NYIE 109


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 747 KRFFKRQKEEKIVAPKDNADTKSLKEKQVENHPKYIQTDSKKINNENSRPFQASDIINLI 806
           K+ +K +   +         ++  KE++    PK I + S K  + N+  ++     N+ 
Sbjct: 47  KKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI- 105

Query: 807 SAKNYFE 813
              NY E
Sbjct: 106 ---NYIE 109


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 747 KRFFKRQKEEKIVAPKDNADTKSLKEKQVENHPKYIQTDSKKINNENSRPFQASDIINLI 806
           K+ +K +   +         ++  KE++    PK I + S K  + N+  ++     N+ 
Sbjct: 280 KKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI- 338

Query: 807 SAKNYFE 813
              NY E
Sbjct: 339 ---NYIE 342


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.129    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,443
Number of Sequences: 429
Number of extensions: 15581
Number of successful extensions: 70
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 62
Number of HSP's gapped (non-prelim): 20
length of query: 925
length of database: 140,377
effective HSP length: 64
effective length of query: 861
effective length of database: 112,921
effective search space: 97224981
effective search space used: 97224981
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 48 (23.4 bits)