GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001444-TA|BGIBMGA001444-PA|IPR000618|Insect cuticle
protein, IPR011047|Quinonprotein alcohol dehydrogenase-like,
IPR006970|PT repeat
         (320 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    58   8e-11
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    22   6.2  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   8.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.2  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 58.4 bits (135), Expect = 8e-11
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 145 NGSYKYEYQIADGTHVGEEGYFTNPNTEEASLVKKGWYSYTGADGKVYTVHYWADKTGYH 204
           +G+Y   ++ ++G    E G     + E   +V +G  SYT  DG+  ++ Y AD+ G+ 
Sbjct: 39  DGNYINNFETSNGISHQESGQPKQVDNE-TPVVSQGSDSYTAPDGQQVSITYVADENGFQ 97

Query: 205 AYGDHLPTPPPVPAAIQAALD 225
             G H+PT PP+P  IQ AL+
Sbjct: 98  VQGSHIPTAPPIPPEIQRALE 118


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 133 VPVIKNEMYYGDNGSYKYEY 152
           V V +NE Y GD+    Y+Y
Sbjct: 109 VAVCRNEEYTGDDCQKTYQY 128


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 137 KNEMYYGDNGSYKYEYQIADGTHVGEEGYFTN 168
           KNE   G   +YK E  + D   V + G   N
Sbjct: 112 KNENCSGITSAYKIEIDMCDRLWVLDSGLINN 143


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query: 60   PPIQWKPQNTWNAPP 74
            P + + P N WN PP
Sbjct: 1154 PHLPFTPFNFWNPPP 1168


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.131    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,842
Number of Sequences: 429
Number of extensions: 2917
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 320
length of database: 140,377
effective HSP length: 58
effective length of query: 262
effective length of database: 115,495
effective search space: 30259690
effective search space used: 30259690
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 44 (21.8 bits)