GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001443-TA|BGIBMGA001443-PA|undefined
         (56 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051968-1|AAK93392.1| 1057|Drosophila melanogaster LD43457p pro...    26   7.2  
AE013599-80|AAF57329.3| 1057|Drosophila melanogaster CG30440-PA ...    26   7.2  

>AY051968-1|AAK93392.1| 1057|Drosophila melanogaster LD43457p
           protein.
          Length = 1057

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 9   NMTHAALPRSEAFHLRLEVQARARNKRQRGT 39
           N+TH +L R+E F L L    R  N R   T
Sbjct: 954 NITHCSLRRTECFELPLNDSNRNTNIRSEKT 984


>AE013599-80|AAF57329.3| 1057|Drosophila melanogaster CG30440-PA
           protein.
          Length = 1057

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 9   NMTHAALPRSEAFHLRLEVQARARNKRQRGT 39
           N+TH +L R+E F L L    R  N R   T
Sbjct: 954 NITHCSLRRTECFELPLNDSNRNTNIRSEKT 984


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.128    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,602,382
Number of Sequences: 52641
Number of extensions: 64890
Number of successful extensions: 117
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115
Number of HSP's gapped (non-prelim): 2
length of query: 56
length of database: 24,830,863
effective HSP length: 37
effective length of query: 19
effective length of database: 22,883,146
effective search space: 434779774
effective search space used: 434779774
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)