GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001443-TA|BGIBMGA001443-PA|undefined
         (56 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   1.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   6.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    18   8.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    18   8.3  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 1.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 12  HAALPRSEAFHLRLEVQARARNKRQRGTIG 41
           H  LP+  A   +LE  A   N + RGT G
Sbjct: 283 HIKLPKLAANRAKLEEIAGKFNLQVRGTRG 312


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 12  HAALPRSEAFHLRLEVQARARNKRQRGTI 40
           H A   SE      ++Q  A+NK+  G++
Sbjct: 734 HRARSESEFEMYHQQLQGVAKNKKNVGSM 762


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)

Query: 29  ARARNKRQRGTIGLPP 44
           A A    QRGT+  PP
Sbjct: 890 ALAEPYNQRGTVVSPP 905


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)

Query: 29  ARARNKRQRGTIGLPP 44
           A A    QRGT+  PP
Sbjct: 928 ALAEPYNQRGTVVSPP 943


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.128    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,401
Number of Sequences: 429
Number of extensions: 395
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 56
length of database: 140,377
effective HSP length: 36
effective length of query: 20
effective length of database: 124,933
effective search space:  2498660
effective search space used:  2498660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.1 bits)
S2: 35 (18.2 bits)