GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001442-TA|BGIBMGA001442-PA|undefined
         (49 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084137-1|AAL89875.1|  887|Drosophila melanogaster RE22456p pro...    27   4.2  
AJ224882-1|CAA12181.1|  886|Drosophila melanogaster PAV-KLP prot...    27   4.2  
AF005853-1|AAB81484.1|  750|Drosophila melanogaster anon2A12 pro...    27   4.2  
AE014296-803|AAF47868.1|  887|Drosophila melanogaster CG1258-PA ...    27   4.2  

>AY084137-1|AAL89875.1|  887|Drosophila melanogaster RE22456p
           protein.
          Length = 887

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 16  NKKETMKTFKLHLKEKSALPYQRKVALQN 44
           N+KE M T K H KEK    +  K+A+++
Sbjct: 619 NEKENMLTQKEHEKEKQKKKFSSKLAVES 647


>AJ224882-1|CAA12181.1|  886|Drosophila melanogaster PAV-KLP protein
           protein.
          Length = 886

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 16  NKKETMKTFKLHLKEKSALPYQRKVALQN 44
           N+KE M T K H KEK    +  K+A+++
Sbjct: 618 NEKENMLTQKEHEKEKQKKKFSSKLAVES 646


>AF005853-1|AAB81484.1|  750|Drosophila melanogaster anon2A12
           protein.
          Length = 750

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 16  NKKETMKTFKLHLKEKSALPYQRKVALQN 44
           N+KE M T K H KEK    +  K+A+++
Sbjct: 482 NEKENMLTQKEHEKEKQKKKFSSKLAVES 510


>AE014296-803|AAF47868.1|  887|Drosophila melanogaster CG1258-PA
           protein.
          Length = 887

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 16  NKKETMKTFKLHLKEKSALPYQRKVALQN 44
           N+KE M T K H KEK    +  K+A+++
Sbjct: 619 NEKENMLTQKEHEKEKQKKKFSSKLAVES 647


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.126    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,047,697
Number of Sequences: 52641
Number of extensions: 46084
Number of successful extensions: 167
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 163
Number of HSP's gapped (non-prelim): 4
length of query: 49
length of database: 24,830,863
effective HSP length: 30
effective length of query: 19
effective length of database: 23,251,633
effective search space: 441781027
effective search space used: 441781027
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)