GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001441-TA|BGIBMGA001441-PA|undefined
         (197 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022875-1|AAY55291.1|  929|Drosophila melanogaster IP12847p pro...    48   9e-06
BT022839-1|AAY55255.1|  929|Drosophila melanogaster IP12947p pro...    48   9e-06
BT015239-1|AAT94468.1| 1241|Drosophila melanogaster RE02133p pro...    48   9e-06
AE013599-3940|AAG22200.3| 1241|Drosophila melanogaster CG33988-P...    48   9e-06

>BT022875-1|AAY55291.1|  929|Drosophila melanogaster IP12847p
           protein.
          Length = 929

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 94  SVLHPAARTDMLIGGEPCERTLHEILGLDAMVARVHYEFADILGRYDCDQAYS-VHSCYE 152
           S LH  A    L   + C R L ++L +D +  R+  E A+IL R+DC Q YS ++ C +
Sbjct: 290 SSLHTLALNASLTDRQECVRVLSDLLDVDGLANRITCELAEILFRFDCRQVYSLINQCDD 349

Query: 153 CQ 154
           C+
Sbjct: 350 CK 351



 Score = 35.5 bits (78), Expect = 0.049
 Identities = 13/19 (68%), Positives = 15/19 (78%)

Query: 21  LARLNPWLSACDLEEEGAG 39
           L RLNPW+SACDL + G G
Sbjct: 86  LTRLNPWISACDLAQPGTG 104


>BT022839-1|AAY55255.1|  929|Drosophila melanogaster IP12947p
           protein.
          Length = 929

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 94  SVLHPAARTDMLIGGEPCERTLHEILGLDAMVARVHYEFADILGRYDCDQAYS-VHSCYE 152
           S LH  A    L   + C R L ++L +D +  R+  E A+IL R+DC Q YS ++ C +
Sbjct: 290 SSLHTLALNASLTDRQECVRVLSDLLDVDGLANRITCELAEILFRFDCRQVYSLINQCDD 349

Query: 153 CQ 154
           C+
Sbjct: 350 CK 351



 Score = 35.5 bits (78), Expect = 0.049
 Identities = 13/19 (68%), Positives = 15/19 (78%)

Query: 21  LARLNPWLSACDLEEEGAG 39
           L RLNPW+SACDL + G G
Sbjct: 86  LTRLNPWISACDLAQPGTG 104


>BT015239-1|AAT94468.1| 1241|Drosophila melanogaster RE02133p
           protein.
          Length = 1241

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 94  SVLHPAARTDMLIGGEPCERTLHEILGLDAMVARVHYEFADILGRYDCDQAYS-VHSCYE 152
           S LH  A    L   + C R L ++L +D +  R+  E A+IL R+DC Q YS ++ C +
Sbjct: 602 SSLHTLALNASLTDRQECVRVLSDLLDVDGLANRITCELAEILFRFDCRQVYSLINQCDD 661

Query: 153 CQ 154
           C+
Sbjct: 662 CK 663



 Score = 35.5 bits (78), Expect = 0.049
 Identities = 13/19 (68%), Positives = 15/19 (78%)

Query: 21  LARLNPWLSACDLEEEGAG 39
           L RLNPW+SACDL + G G
Sbjct: 398 LTRLNPWISACDLAQPGTG 416


>AE013599-3940|AAG22200.3| 1241|Drosophila melanogaster CG33988-PA
           protein.
          Length = 1241

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 94  SVLHPAARTDMLIGGEPCERTLHEILGLDAMVARVHYEFADILGRYDCDQAYS-VHSCYE 152
           S LH  A    L   + C R L ++L +D +  R+  E A+IL R+DC Q YS ++ C +
Sbjct: 602 SSLHTLALNASLTDRQECVRVLSDLLDVDGLANRITCELAEILFRFDCRQVYSLINQCDD 661

Query: 153 CQ 154
           C+
Sbjct: 662 CK 663



 Score = 35.5 bits (78), Expect = 0.049
 Identities = 13/19 (68%), Positives = 15/19 (78%)

Query: 21  LARLNPWLSACDLEEEGAG 39
           L RLNPW+SACDL + G G
Sbjct: 398 LTRLNPWISACDLAQPGTG 416


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.135    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,715,326
Number of Sequences: 52641
Number of extensions: 206757
Number of successful extensions: 475
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 467
Number of HSP's gapped (non-prelim): 8
length of query: 197
length of database: 24,830,863
effective HSP length: 81
effective length of query: 116
effective length of database: 20,566,942
effective search space: 2385765272
effective search space used: 2385765272
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)