Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001440-TA|BGIBMGA001440-PA|undefined
         (129 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    20   7.6  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    20   7.6  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 9/26 (34%), Positives = 11/26 (42%)

Query: 104 RGKDNTKLAPQRGKDNTKHKTGASTW 129
           RG+  TK+    G    K   G  TW
Sbjct: 396 RGQLRTKIESGEGTIPVKSSEGIQTW 421


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
          protein.
          Length = 411

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 6/19 (31%), Positives = 13/19 (68%)

Query: 72 WDPLEYSYPVLQLDNTKLA 90
          W+ +EY++P   + NT ++
Sbjct: 24 WNVIEYNFPNDNIRNTLIS 42


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.131    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,462
Number of Sequences: 429
Number of extensions: 1280
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 129
length of database: 140,377
effective HSP length: 51
effective length of query: 78
effective length of database: 118,498
effective search space:  9242844
effective search space used:  9242844
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)
S2: 40 (20.2 bits)