GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001440-TA|BGIBMGA001440-PA|undefined
         (129 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    27   0.27 
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    24   1.4  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 16/47 (34%), Positives = 21/47 (44%)

Query: 36  RVRPFSGADSSPATTEAYTREYVRTSLATIPFRTCLWDPLEYSYPVL 82
           R+   +   S PA    YT  +   SL    F T L D ++  YPVL
Sbjct: 495 RIDGVNAIQSDPADKLHYTARHPIGSLKRFGFHTYLIDMVQGPYPVL 541


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
          protein.
          Length = 696

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 37 VRPFSGADSSPATTEAYTREYVRTSLATIP 66
          +  FS A ++PA T A T    R SL  IP
Sbjct: 50 INRFSAAAAAPAGTSADTPTMNRVSLNNIP 79


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,341
Number of Sequences: 2123
Number of extensions: 4331
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 2
length of query: 129
length of database: 516,269
effective HSP length: 57
effective length of query: 72
effective length of database: 395,258
effective search space: 28458576
effective search space used: 28458576
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)