Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001439-TA|BGIBMGA001439-PA|undefined
(195 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces ... 26 4.2
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 25 5.6
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 25 5.6
SPBC4B4.12c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 5.6
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 25 5.6
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 25 5.6
SPCC285.09c |cgs2|pde1|cAMP-specific phosphodiesterase Cgs2|Schi... 25 7.4
SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces pombe... 25 7.4
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 25 7.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 7.4
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 25 9.7
>SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 598
Score = 25.8 bits (54), Expect = 4.2
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 131 KYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSL----VSRVGPQPDPVHYALPDT 186
+Y E G K+NE + + + + N+L L +S GP +HY+ P T
Sbjct: 324 EYFAWLDEYLNSGNKINEFDAATKLEQFRRKNNLFMGLSFETISSTGPNGAVIHYSPPAT 383
Query: 187 G 187
G
Sbjct: 384 G 384
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 51 THSDIAE-ATMISGMEAITRDHVSAVIHRFRKPVPDYLLAKVETVRKIQPP 100
T+S A+ A +S ++ T ++ HRFR V D+ + +RKI P
Sbjct: 134 TYSCCAQFALSLSNVQDPTVMQINTSHHRFRSEVKDWGFTRFVDLRKIAVP 184
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 8 NPKVINFLIENYEKESRLRAKWFNLHKEKIEKCATLK 44
NPKV++ + +KE++LR+ +H++K + T+K
Sbjct: 985 NPKVMDMIDGVEKKEAKLRSMIKTIHRDKKKIQDTVK 1021
>SPBC4B4.12c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 110
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 112 LKESKKSYLNMRNKRGPDDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLL 165
L E K+++L +R + + K ++ WK + NE+ L+ RG ++ N L
Sbjct: 25 LMELKENFLYIRTREKIEAKLIWAGEWEWKPVNETNENNLE-RGRQYPSANSAL 77
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 5.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 87 LLAKVETVRKIQPPMIAATSSEKDIL----KESKKSYL----NMRNKRGPDDKYLYMESE 138
L + +E +RK+ + SSEK+ L K +K SY ++ + R +DKY +++
Sbjct: 122 LESHIEALRKVYDDLYKKFSSEKETLLNSVKRAKVSYHEACDDLESARQKNDKYREQKTQ 181
Query: 139 NWKYGWKLNESEL 151
KL+ES++
Sbjct: 182 R---NLKLSESDM 191
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 83 VPDYLLAKVETVRKIQPPMIAATSSE---KDILKESKKSYLNMRNKRGPDDKYL 133
+P Y V+T P + + E +D+LKE K+ N+ P D+++
Sbjct: 385 IPSYGYLSVDTSDANNPTIGTVSGLEAAMQDVLKEKKQEMKNIDPSNQPSDQFI 438
>SPCC285.09c |cgs2|pde1|cAMP-specific phosphodiesterase
Cgs2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 346
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 130 DKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRV--GPQ 175
D Y +E+E++ W L+E +K H ++H+ ++++ GPQ
Sbjct: 87 DNYT-VENESYAKAWHLSEQRIKTFLITHCHLDHIYGAVINSAMFGPQ 133
>SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 342
Score = 25.0 bits (52), Expect = 7.4
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 13 NFLIENYEKESRLRAKWFNLHKEKIEKCATLKVDTKNYTHSDIAEATMISGM----EAIT 68
++LI + + R + FN + +++C L V N+ A T G+ E I
Sbjct: 63 SYLINMANADEQKREQAFNCFVDDLKRCERLGVGLYNFHPGSTASCTKEEGINNLAECIN 122
Query: 69 RDH 71
R H
Sbjct: 123 RAH 125
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 117 KSYLNMRNKRGPDDKYLYMESENWKYGWKLNESELKLR 154
K+Y M GP + +LY +E K WK N ++L +R
Sbjct: 225 KTYYYMEES-GPSNVFLYDHAEGDKVDWKEN-ADLTVR 260
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.0 bits (52), Expect = 7.4
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 6 VSNPKVINFLIENYEKESRLRAKWFNLHKEKIEKCATLKVDTK 48
VS+ K ++ L + E+ LRA+ L +EK+EKCA + D+K
Sbjct: 260 VSSNKTVSTLRQT---ENSLRAECKTL-QEKLEKCAINEEDSK 298
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 102 IAATSSEKDILKESKKSYLNMRNKRGPDDKYLYMESENWK 141
I E DI+ +SK S N + KR P + L E+++ K
Sbjct: 582 IVINLDEYDIIVDSKTSSHNKQLKRRPSNDTLTQEAKSKK 621
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 948,669
Number of Sequences: 5004
Number of extensions: 38085
Number of successful extensions: 114
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 111
Number of HSP's gapped (non-prelim): 11
length of query: 195
length of database: 2,362,478
effective HSP length: 69
effective length of query: 126
effective length of database: 2,017,202
effective search space: 254167452
effective search space used: 254167452
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)
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