Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001439-TA|BGIBMGA001439-PA|undefined
(195 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1633| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_31822| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_14676| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19) 29 1.9
SB_51200| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_8572| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17) 29 2.5
SB_2895| Best HMM Match : RnaseH (HMM E-Value=3.1) 29 2.5
SB_42289| Best HMM Match : RVT_1 (HMM E-Value=5.2e-17) 29 2.5
SB_34611| Best HMM Match : rve (HMM E-Value=6.6e-22) 29 2.5
SB_27267| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17) 29 2.5
SB_27043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 29 3.4
SB_37239| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19) 29 3.4
SB_17208| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19) 29 3.4
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_50204| Best HMM Match : rve (HMM E-Value=6.6e-22) 29 3.4
SB_27075| Best HMM Match : rve (HMM E-Value=1.5e-16) 29 3.4
SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099) 28 5.9
SB_51018| Best HMM Match : RVT_1 (HMM E-Value=5.8e-17) 28 5.9
SB_32231| Best HMM Match : PRKCSH (HMM E-Value=4.3e-12) 28 5.9
SB_53148| Best HMM Match : rve (HMM E-Value=4.8e-21) 27 7.7
SB_47242| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 27 7.7
SB_44206| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_31616| Best HMM Match : rve (HMM E-Value=6.9e-21) 27 7.7
SB_28476| Best HMM Match : RVT_1 (HMM E-Value=1.1e-19) 27 7.7
SB_24272| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 27 7.7
SB_17257| Best HMM Match : rve (HMM E-Value=8.3e-08) 27 7.7
SB_6769| Best HMM Match : rve (HMM E-Value=3.5e-19) 27 7.7
SB_4272| Best HMM Match : RVT_1 (HMM E-Value=2e-28) 27 7.7
SB_1718| Best HMM Match : I-set (HMM E-Value=3.8e-07) 27 7.7
SB_59670| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_50912| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 27 7.7
SB_47642| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 27 7.7
SB_39940| Best HMM Match : Mnd1 (HMM E-Value=4.5e-16) 27 7.7
SB_34858| Best HMM Match : RVT_1 (HMM E-Value=2.9e-19) 27 7.7
SB_32461| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 27 7.7
SB_22228| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 27 7.7
SB_10467| Best HMM Match : zf-PARP (HMM E-Value=5.6e-35) 27 7.7
SB_2465| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_1625| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_1633| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 40.7 bits (91), Expect = 8e-04
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Query: 13 NFLIENYEKESRLRAKWFNLHKEKIEKCATL-KVDTKNYTHSDIAEATMIS---GMEAIT 68
NF E+ KE+ +R W + ++ + A + K + +A T+ S ++
Sbjct: 13 NFWKESINKEAYVRLNWHARYSKEFSRSAYVPKPRKEGMVIKPVASLTLPSKKLDSTTVS 72
Query: 69 RDHVSAVIHRFR---KPVPDYLLAKVETVRKIQPPMIAATSSEKDILKESKKSYLNMRNK 125
+ + I +F K P+ LL ++ V ++ S L E + YL R
Sbjct: 73 KTKLQDSIAQFEAAAKEDPNSLLIEMRPVSSNTKKLLYNGFSA---LGEGRYQYLEKRKM 129
Query: 126 RGPDDKYLYMESENWKYGWKLNESELKLRGPEHGK 160
+ P+ KY + + W+ GWK++E ++ + G+
Sbjct: 130 KKPEQKYEFPITSAWEIGWKIDEYCPTMKAAQFGR 164
>SB_31822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 92 ETVRKIQPPMIAATSSEKDILKESKKS-YLNMRNKRGPDDKYLYMESENWKYGWKLNESE 150
+ VRK Q P + ATS K K+ K L++R + + +S + W N
Sbjct: 85 QAVRKRQTPPLFATSDAKRSKKDDKDGCILDLRQRCDEHLIDMGQKSRVHGFSWARNSVF 144
Query: 151 LKLRGPE 157
+ +RGPE
Sbjct: 145 MAVRGPE 151
>SB_14676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 905
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 118 SYLNMRNKRGPDDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPD 177
SY++ +++ ++ + +E + G K N S++KLR E ++++ H L S+ G QPD
Sbjct: 531 SYMHKTSQKWMENCLMVLERSR-EVGLKFNPSKVKLRVDE---VSYVGHRLTSQ-GLQPD 585
Query: 178 P 178
P
Sbjct: 586 P 586
>SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19)
Length = 1451
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 118 SYLNMRNKRGPDDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPD 177
SY++ +++ ++ + +E + G K N S++KLR E ++++ H L S+ G QPD
Sbjct: 531 SYMHKTSQKWMENCLMVLERSR-EVGLKFNPSKVKLRVDE---VSYVGHRLTSQ-GLQPD 585
Query: 178 P 178
P
Sbjct: 586 P 586
>SB_51200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 938
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
DDK + + + + G K N + KLR PE + HL + G +PDP
Sbjct: 285 DDKMIAVLKRSREIGLKFNPRKAKLRVPEVSYVGHLF----TADGLKPDP 330
>SB_8572| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17)
Length = 1432
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
DDK + + + + G K N + KLR PE + HL + G +PDP
Sbjct: 501 DDKMIAVLKRSREIGLKFNPRKAKLRVPEVSYVGHLF----TADGLKPDP 546
>SB_2895| Best HMM Match : RnaseH (HMM E-Value=3.1)
Length = 342
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
DDK + + + + G K N + KLR PE + HL + G +PDP
Sbjct: 72 DDKMIAVLKRSREIGLKFNPRKAKLRVPEVSYVGHLF----TADGLKPDP 117
>SB_42289| Best HMM Match : RVT_1 (HMM E-Value=5.2e-17)
Length = 429
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
DDK + + + + G K N + KLR PE + HL + G +PDP
Sbjct: 239 DDKMIAVLKRSREIGLKFNPRKAKLRVPEVSYVGHLF----TADGLKPDP 284
>SB_34611| Best HMM Match : rve (HMM E-Value=6.6e-22)
Length = 875
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
DDK + + + + G K N + KLR PE + HL + G +PDP
Sbjct: 154 DDKMIAVLKRSREIGLKFNPRKAKLRVPEVSYVGHLF----TADGLKPDP 199
>SB_27267| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17)
Length = 649
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
DDK + + + + G K N + KLR PE + HL + G +PDP
Sbjct: 557 DDKMIAVLKRSREIGLKFNPRKAKLRVPEVSYVGHLF----TADGLKPDP 602
>SB_27043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
DDK + + + + G K N + KLR PE + HL + G +PDP
Sbjct: 95 DDKMIAVLKRSREIGLKFNPRKAKLRVPEVSYVGHLF----TADGLKPDP 140
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D+K + + + G K N S++KLR E ++++ H L S+ G QPDP
Sbjct: 333 DEKLSMVLERSREVGLKFNPSKVKLRVDE---VSYVGHRLTSQ-GLQPDP 378
>SB_37239| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19)
Length = 690
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D+K + + + G K N S++KLR E ++++ H L S+ G QPDP
Sbjct: 333 DEKLSMVLERSREVGLKFNPSKVKLRVDE---VSYVGHRLTSQ-GLQPDP 378
>SB_17208| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19)
Length = 1053
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D+K + + + G K N S++KLR E ++++ H L S+ G QPDP
Sbjct: 819 DEKLSMVLERSREVGLKFNPSKVKLRVDE---VSYVGHRLTSQ-GLQPDP 864
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D+K + + + G K N S++KLR E ++++ H L S+ G QPDP
Sbjct: 333 DEKLSMVLERSREVGLKFNPSKVKLRVDE---VSYVGHRLTSQ-GLQPDP 378
>SB_50204| Best HMM Match : rve (HMM E-Value=6.6e-22)
Length = 800
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDPV 179
DDK + + + + G K N + KLR PE + HL + P P+ V
Sbjct: 333 DDKMIAVLKRSREIGLKFNPRKAKLRVPEVSYVGHLF--TADGLXPDPEKV 381
>SB_27075| Best HMM Match : rve (HMM E-Value=1.5e-16)
Length = 656
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D+K + + + G K N S++KLR E ++++ H L S+ G QPDP
Sbjct: 28 DEKLSMVLERSREVGLKFNPSKVKLRVDE---VSYVGHRLTSQ-GLQPDP 73
>SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1451
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D+K + + + G K N S++KLR K++++ H L S+ G QPDP
Sbjct: 488 DEKLSMVLERSREVGLKFNPSKVKLR---VDKVSYVGHRLTSQ-GLQPDP 533
>SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099)
Length = 2489
Score = 27.9 bits (59), Expect = 5.9
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 85 DYLLAKVETVRKIQPPMIAATSSEKDIL-KESKKSYLNMRNKRGPDDKYLYMESENWKYG 143
D+ +A E +P A +S +++ KES+KS G D+ + W
Sbjct: 547 DFEMASWEQHASFEPGRKAPSSKVAEVINKESRKS-------SGESDRRI---ENQWSAF 596
Query: 144 WKLNESELKLRGPEHGKINHLLHSLVSRVGP 174
ESE + GP HG I ++L+S P
Sbjct: 597 SSSKESEDVVCGPSHGSIEKEGYTLISDENP 627
>SB_51018| Best HMM Match : RVT_1 (HMM E-Value=5.8e-17)
Length = 635
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + K G K N + KLR PE + HL + G +PDP
Sbjct: 333 DHKMIAVLKRSRKIGLKFNPRKAKLRVPEVSYVGHLF----TADGLKPDP 378
>SB_32231| Best HMM Match : PRKCSH (HMM E-Value=4.3e-12)
Length = 917
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/37 (27%), Positives = 24/37 (64%)
Query: 112 LKESKKSYLNMRNKRGPDDKYLYMESENWKYGWKLNE 148
+K +++ + ++R + GP++ Y S N++YGW + +
Sbjct: 675 VKYTERLHKHIRPENGPNEIYDRKISTNYEYGWWMRD 711
>SB_53148| Best HMM Match : rve (HMM E-Value=4.8e-21)
Length = 1329
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 624 DRKMIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 669
>SB_47242| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 450
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 314 DRKMIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 359
>SB_44206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 154 DRKMIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 199
>SB_31616| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 1183
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 463 DRKMIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 508
>SB_28476| Best HMM Match : RVT_1 (HMM E-Value=1.1e-19)
Length = 332
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 239 DRKMIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 284
>SB_24272| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 1197
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 477 DRKMIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 522
>SB_17257| Best HMM Match : rve (HMM E-Value=8.3e-08)
Length = 962
Score = 27.5 bits (58), Expect = 7.7
Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 17 ENYEKESRLRAKWFNLHKEKIEKCATLKVDTKNYTHSDIAEATMISGMEAITRDHVSAVI 76
E +EK + K LH + K T++ D+ NY + +T DH
Sbjct: 617 EAFEKIKMMITKAPVLHYYDVNKEVTIESDSSNYKPGPTMYLSDSLSRGTLTLDHA---- 672
Query: 77 HRFRKPVPDYLLAKVETVRKIQPPMIAATSSEKDILKESKKSYLNMRNKRGPDDKYLYME 136
R P Y + ++ KI P I +K + ++ N+R + D +
Sbjct: 673 ---RPDTPAYQIFQISEEEKI-PEEIEDIDMQKSMFVTDER-LDNIRRETAKDPSLQTLM 727
Query: 137 SENWKYGWKLNESEL 151
+ K GW N++E+
Sbjct: 728 TVT-KQGWPENKAEV 741
>SB_6769| Best HMM Match : rve (HMM E-Value=3.5e-19)
Length = 577
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 145 KLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
KLN +LKLR PE I HLL + G +PDP
Sbjct: 66 KLNPKKLKLRLPEVPYIGHLL----TPGGVKPDP 95
>SB_4272| Best HMM Match : RVT_1 (HMM E-Value=2e-28)
Length = 876
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 145 KLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
KLN +LKLR PE I HLL + G +PDP
Sbjct: 289 KLNPKKLKLRLPEVPYIGHLL----TPGGVKPDP 318
>SB_1718| Best HMM Match : I-set (HMM E-Value=3.8e-07)
Length = 1017
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 145 KLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
KLN +LKLR PE I HLL + G +PDP
Sbjct: 643 KLNPKKLKLRLPEVPYIGHLL----TPGGVKPDP 672
>SB_59670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 419 DRKMIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 464
>SB_50912| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 302
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 154 DRKMIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 199
>SB_47642| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 1336
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 561 DRKMIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 606
>SB_39940| Best HMM Match : Mnd1 (HMM E-Value=4.5e-16)
Length = 179
Score = 27.5 bits (58), Expect = 7.7
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 20 EKESRLRAKWFNLHKEKIEKCATLKVDTKNYTHSDIAEATM--ISGMEAITRDHVSAVIH 77
EK RL+ +F K KI++ +T D + S + + E+ R+ + +
Sbjct: 43 EKRHRLQELFFEKRKRKIDELSTAVADYEKKISSSSKQIKQANVGREESENRESLLQQLA 102
Query: 78 RFRKPVPDYLLAKVETVRKIQPPMIAATSSEKDILKES 115
++ + L A++ET R+ P ++ E + KE+
Sbjct: 103 D-KEELCHKLEAELETYRECDPDVLDKLQQETAVAKEA 139
>SB_34858| Best HMM Match : RVT_1 (HMM E-Value=2.9e-19)
Length = 201
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 154 DRKMIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 199
>SB_32461| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 320
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 273 DRKMIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 318
>SB_22228| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 302
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 154 DRKMIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 199
>SB_10467| Best HMM Match : zf-PARP (HMM E-Value=5.6e-35)
Length = 1311
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 878 DRKVIAVLERSREVGLKFNPKKIKLRVPEVSYVGHVFTS----EGLKPDP 923
>SB_2465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 129 DDKYLYMESENWKYGWKLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
D K + + + + G K N ++KLR PE + H+ S G +PDP
Sbjct: 196 DRKMIAVLERSREVGLKFNPKKIKLRVPEISYVGHVFTS----EGLKPDP 241
>SB_1625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 145 KLNESELKLRGPEHGKINHLLHSLVSRVGPQPDP 178
KLN +LKLR PE I HLL + G +PDP
Sbjct: 452 KLNPKKLKLRLPEVPYIGHLL----TPGGVKPDP 481
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,915,625
Number of Sequences: 59808
Number of extensions: 266303
Number of successful extensions: 809
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 792
Number of HSP's gapped (non-prelim): 48
length of query: 195
length of database: 16,821,457
effective HSP length: 78
effective length of query: 117
effective length of database: 12,156,433
effective search space: 1422302661
effective search space used: 1422302661
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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