Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001439-TA|BGIBMGA001439-PA|undefined
(195 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013600-1|AAH13600.2| 358|Homo sapiens CCDC47 protein protein. 31 2.0
BC008905-1|AAH08905.1| 483|Homo sapiens coiled-coil domain cont... 31 2.0
AK075387-1|BAC11587.1| 483|Homo sapiens protein ( Homo sapiens ... 31 2.0
AK027844-1|BAB55407.1| 483|Homo sapiens protein ( Homo sapiens ... 31 2.0
AK027786-1|BAB55367.1| 480|Homo sapiens protein ( Homo sapiens ... 31 2.0
AF226054-1|AAF86954.1| 483|Homo sapiens GK001 protein. 31 2.0
Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein. 30 4.5
BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium p... 30 4.5
BC067215-1|AAH67215.1| 1160|Homo sapiens EHBP1 protein protein. 30 4.5
AY531390-1|AAS48537.1| 1196|Homo sapiens EH domain binding prote... 30 4.5
AY331186-1|AAQ97141.1| 1231|Homo sapiens NPF/calponin-like prote... 30 4.5
AC007098-1|AAY14789.1| 893|Homo sapiens unknown protein. 30 4.5
AB020710-1|BAA74926.1| 962|Homo sapiens KIAA0903 protein protein. 30 4.5
BC017587-1|AAH17587.1| 244|Homo sapiens chromosome 7 open readi... 29 7.9
AL158822-4|CAI39240.1| 1315|Homo sapiens potassium channel, subf... 29 7.9
AK097635-1|BAC05126.1| 244|Homo sapiens protein ( Homo sapiens ... 29 7.9
>BC013600-1|AAH13600.2| 358|Homo sapiens CCDC47 protein protein.
Length = 358
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 11 VINFLIENYEKESRLRAKWFNLHKEKIEKCATLKVD 46
++N++I K SRL WFN H+E +E TL D
Sbjct: 25 IMNYIIGK-NKNSRLAQAWFNTHRELLESNFTLVGD 59
>BC008905-1|AAH08905.1| 483|Homo sapiens coiled-coil domain
containing 47 protein.
Length = 483
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 11 VINFLIENYEKESRLRAKWFNLHKEKIEKCATLKVD 46
++N++I K SRL WFN H+E +E TL D
Sbjct: 150 IMNYIIGK-NKNSRLAQAWFNTHRELLESNFTLVGD 184
>AK075387-1|BAC11587.1| 483|Homo sapiens protein ( Homo sapiens
cDNA PSEC0077 fis, clone NT2RP2003902, highly similar to
GK001 protein. ).
Length = 483
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 11 VINFLIENYEKESRLRAKWFNLHKEKIEKCATLKVD 46
++N++I K SRL WFN H+E +E TL D
Sbjct: 150 IMNYIIGK-NKNSRLAQAWFNTHRELLESNFTLVGD 184
>AK027844-1|BAB55407.1| 483|Homo sapiens protein ( Homo sapiens
cDNA FLJ14938 fis, clone PLACE1010622, weakly similar to
TROPONIN T, CARDIAC MUSCLE ISOFORMS. ).
Length = 483
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 11 VINFLIENYEKESRLRAKWFNLHKEKIEKCATLKVD 46
++N++I K SRL WFN H+E +E TL D
Sbjct: 150 IMNYIIGK-NKNSRLAQAWFNTHRELLESNFTLVGD 184
>AK027786-1|BAB55367.1| 480|Homo sapiens protein ( Homo sapiens
cDNA FLJ14880 fis, clone PLACE1003369. ).
Length = 480
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 11 VINFLIENYEKESRLRAKWFNLHKEKIEKCATLKVD 46
++N++I K SRL WFN H+E +E TL D
Sbjct: 150 IMNYIIGK-NKNSRLAQAWFNTHRELLESNFTLVGD 184
>AF226054-1|AAF86954.1| 483|Homo sapiens GK001 protein.
Length = 483
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 11 VINFLIENYEKESRLRAKWFNLHKEKIEKCATLKVD 46
++N++I K SRL WFN H+E +E TL D
Sbjct: 150 IMNYIIGK-NKNSRLAQAWFNTHRELLESNFTLVGD 184
>Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein.
Length = 916
Score = 30.3 bits (65), Expect = 4.5
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 19 YEKESR-LRAKWFNLHKEKIEKCATLKVDTKNYTHSDIAEATMISGMEAITRDHVSAVIH 77
Y++E R LRA ++ EK A +++D+ ++ DI EA RD A I
Sbjct: 150 YDQEIRELRATLEMVNHEK----AQVQLDS-DHLEEDIHRLKERFEEEARLRDDTEAAIR 204
Query: 78 RFRKPVPDYLLAKVETVRKIQ 98
RK + + L KVE +K+Q
Sbjct: 205 ALRKDIEEASLVKVELDKKVQ 225
>BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium
polypeptide 150kDa protein.
Length = 916
Score = 30.3 bits (65), Expect = 4.5
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 19 YEKESR-LRAKWFNLHKEKIEKCATLKVDTKNYTHSDIAEATMISGMEAITRDHVSAVIH 77
Y++E R LRA ++ EK A +++D+ ++ DI EA RD A I
Sbjct: 150 YDQEIRELRATLEMVNHEK----AQVQLDS-DHLEEDIHRLKERFEEEARLRDDTEAAIR 204
Query: 78 RFRKPVPDYLLAKVETVRKIQ 98
RK + + L KVE +K+Q
Sbjct: 205 ALRKDIEEASLVKVELDKKVQ 225
>BC067215-1|AAH67215.1| 1160|Homo sapiens EHBP1 protein protein.
Length = 1160
Score = 30.3 bits (65), Expect = 4.5
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 53 SDIAEATMISGMEAITRDHVSAVIHRFRKPVPDYLLAKVETVRKIQPPMIAATSSEKDIL 112
++ +E M SG E + + + RFR PV + +K TVRK Q + + +
Sbjct: 903 TESSEQDMKSGTEDLRTERLQKTTERFRNPV---VFSKDSTVRKTQLQSFSQYIENRPEM 959
Query: 113 KESKKSYLNMRNKRGPDDKYLYMESE 138
K + + K+G ++K E++
Sbjct: 960 KRQRS--IQEDTKKGNEEKAAITETQ 983
>AY531390-1|AAS48537.1| 1196|Homo sapiens EH domain binding protein 1
protein.
Length = 1196
Score = 30.3 bits (65), Expect = 4.5
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 53 SDIAEATMISGMEAITRDHVSAVIHRFRKPVPDYLLAKVETVRKIQPPMIAATSSEKDIL 112
++ +E M SG E + + + RFR PV + +K TVRK Q + + +
Sbjct: 939 TESSEQDMKSGTEDLRTERLQKTTERFRNPV---VFSKDSTVRKTQLQSFSQYIENRPEM 995
Query: 113 KESKKSYLNMRNKRGPDDKYLYMESE 138
K + + K+G ++K E++
Sbjct: 996 KRQRS--IQEDTKKGNEEKAAITETQ 1019
>AY331186-1|AAQ97141.1| 1231|Homo sapiens NPF/calponin-like protein
protein.
Length = 1231
Score = 30.3 bits (65), Expect = 4.5
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 53 SDIAEATMISGMEAITRDHVSAVIHRFRKPVPDYLLAKVETVRKIQPPMIAATSSEKDIL 112
++ +E M SG E + + + RFR PV + +K TVRK Q + + +
Sbjct: 974 TESSEQDMKSGTEDLRTERLQKTTERFRNPV---VFSKDSTVRKTQLQSFSQYIENRPEM 1030
Query: 113 KESKKSYLNMRNKRGPDDKYLYMESE 138
K + + K+G ++K E++
Sbjct: 1031 KRQRS--IQEDTKKGNEEKAAITETQ 1054
>AC007098-1|AAY14789.1| 893|Homo sapiens unknown protein.
Length = 893
Score = 30.3 bits (65), Expect = 4.5
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 53 SDIAEATMISGMEAITRDHVSAVIHRFRKPVPDYLLAKVETVRKIQPPMIAATSSEKDIL 112
++ +E M SG E + + + RFR PV + +K TVRK Q + + +
Sbjct: 762 TESSEQDMKSGTEDLRTERLQKTTERFRNPV---VFSKDSTVRKTQLQSFSQYIENRPEM 818
Query: 113 KESKKSYLNMRNKRGPDDKYLYMESE 138
K + + K+G ++K E++
Sbjct: 819 KRQRS--IQEDTKKGNEEKAAITETQ 842
>AB020710-1|BAA74926.1| 962|Homo sapiens KIAA0903 protein protein.
Length = 962
Score = 30.3 bits (65), Expect = 4.5
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 53 SDIAEATMISGMEAITRDHVSAVIHRFRKPVPDYLLAKVETVRKIQPPMIAATSSEKDIL 112
++ +E M SG E + + + RFR PV + +K TVRK Q + + +
Sbjct: 705 TESSEQDMKSGTEDLRTERLQKTTERFRNPV---VFSKDSTVRKTQLQSFSQYIENRPEM 761
Query: 113 KESKKSYLNMRNKRGPDDKYLYMESE 138
K + + K+G ++K E++
Sbjct: 762 KRQRS--IQEDTKKGNEEKAAITETQ 785
>BC017587-1|AAH17587.1| 244|Homo sapiens chromosome 7 open reading
frame 45 protein.
Length = 244
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 165 LHSLVSRVGPQPDPVHYALPDTGYEC 190
L SL V P P PV+ A+P+ YEC
Sbjct: 4 LFSLFWEVDPPPIPVNCAIPNQDYEC 29
>AL158822-4|CAI39240.1| 1315|Homo sapiens potassium channel, subfamily
T, member 1 protein.
Length = 1315
Score = 29.5 bits (63), Expect = 7.9
Identities = 21/88 (23%), Positives = 34/88 (38%)
Query: 46 DTKNYTHSDIAEATMISGMEAITRDHVSAVIHRFRKPVPDYLLAKVETVRKIQPPMIAAT 105
D N T SD+ + ++ DH + + + P PD L + V I+ +A
Sbjct: 1228 DVANLTASDVMNRVNLGYLQDEMNDHQNTLSYVLINPPPDTRLEPSDIVYLIRSDPLAHV 1287
Query: 106 SSEKDILKESKKSYLNMRNKRGPDDKYL 133
+S K S L+ N D+ L
Sbjct: 1288 ASSSQSRKSSCSHKLSSCNPETRDETQL 1315
>AK097635-1|BAC05126.1| 244|Homo sapiens protein ( Homo sapiens
cDNA FLJ40316 fis, clone TESTI2030342. ).
Length = 244
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 165 LHSLVSRVGPQPDPVHYALPDTGYEC 190
L SL V P P PV+ A+P+ YEC
Sbjct: 4 LFSLFWEVDPPPIPVNCAIPNQDYEC 29
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,638,585
Number of Sequences: 224733
Number of extensions: 1208743
Number of successful extensions: 3056
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3051
Number of HSP's gapped (non-prelim): 18
length of query: 195
length of database: 73,234,838
effective HSP length: 86
effective length of query: 109
effective length of database: 53,907,800
effective search space: 5875950200
effective search space used: 5875950200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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