Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001438-TA|BGIBMGA001438-PA|IPR009730|Micro-fibrillar-
associated 1, C-terminal
(441 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27494| Best HMM Match : MFAP1_C (HMM E-Value=0) 96 4e-20
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.3
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 30 4.3
SB_44424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_34539| Best HMM Match : SIR2 (HMM E-Value=1.7) 29 7.5
SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.9
SB_7123| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.9
SB_3166| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.9
>SB_27494| Best HMM Match : MFAP1_C (HMM E-Value=0)
Length = 808
Score = 96.3 bits (229), Expect = 4e-20
Identities = 41/61 (67%), Positives = 51/61 (83%)
Query: 354 DKEEDVFKQDFSGPTLDDHFDKTVLPKVMQVKKFGRSGRTKYTHLVDQDTTEFDSAWSNE 413
D+E+ V+K++F+ PTL+DHFDKT++PKVMQVK FGRSGRTKYTHLVDQDTT + W
Sbjct: 433 DEEDTVYKRNFAQPTLEDHFDKTIVPKVMQVKNFGRSGRTKYTHLVDQDTTNEKTDWLTV 492
Query: 414 T 414
T
Sbjct: 493 T 493
Score = 45.6 bits (103), Expect = 8e-05
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 25 GEISMQKVKVQRYISGKKPDYAQ------------------GMXXXXXXXXXXFIEQQRP 66
GEI+M+KVKV RY++GK+P+YA+ G F + ++
Sbjct: 113 GEITMEKVKVTRYVAGKRPEYAKYSSDEEDVDMEVFTGQVLGGQTDDQDLEQAFEQAEKT 172
Query: 67 ERKQVLPQIITRKEEHHSDSEKEVDDPRLRRLRNIAQ-SPPRRAEHKPEIIDAEPEAESE 125
+R+ Q +R ++ E+E+D+ + R R + + ++ E + +++D E E +SE
Sbjct: 173 DRRLRRLQERSRGDQDEEIDEEEIDEEEIERRRQMLRLKAQQKKEAEKDLLDLEDEVKSE 232
Score = 41.1 bits (92), Expect = 0.002
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 209 SERMTVAERERKMXXXXXXXXXXXXXXXXXXXXXXXXXXXTIRSEQRGAQGEQKEGNIND 268
S+R+TV ER++ +R E + QG +K+ ++
Sbjct: 326 SDRVTVQERQKMELDEERQEENKKKMMEERRKYSRKIVEDLVRKELQEEQGVEKDEDV-- 383
Query: 269 VCTDDENDELEYEAWKL 285
V TD+ENDE EYEAWK+
Sbjct: 384 VITDNENDEEEYEAWKV 400
Score = 40.3 bits (90), Expect = 0.003
Identities = 16/19 (84%), Positives = 19/19 (100%)
Query: 189 EYTDSEEDTGPRVKPVFVR 207
EY+DSEE+TGPR+KPVFVR
Sbjct: 244 EYSDSEEETGPRLKPVFVR 262
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 62 EQQRPERKQVLPQIITRKEEHHSDSEKEVDDPRLRRLRN--IAQSPPRRAEHKPEIIDAE 119
E++R E ++ + KEE D E+E + + + ++ P E +PE +AE
Sbjct: 1056 EKKRKEEEESKKKDEKEKEEEDEDEEEEEEKKEDAKTDDSETKEAEPESKEAEPESKEAE 1115
Query: 120 PEAESE 125
PE++ E
Sbjct: 1116 PESKEE 1121
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 96 RRLRNIAQSPPRRAEHKPEIIDAE 119
R+LR SPPRR +KP+ +D +
Sbjct: 1818 RKLREYLLSPPRRGMYKPDCVDGQ 1841
>SB_44424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1350
Score = 29.1 bits (62), Expect = 7.5
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 355 KEEDVFKQDFS--GPTLDDHFDKTVLPKVMQVKKFGRSGRTK 394
K+ED+F QDF+ D F LP++++ + FGR G +K
Sbjct: 1240 KKEDIF-QDFTQTSAVFVDPFSLEELPRMVEGRTFGRFGSSK 1280
>SB_34539| Best HMM Match : SIR2 (HMM E-Value=1.7)
Length = 1384
Score = 29.1 bits (62), Expect = 7.5
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 355 KEEDVFKQDFS--GPTLDDHFDKTVLPKVMQVKKFGRSGRTK 394
K+ED+F QDF+ D F LP++++ + FGR G +K
Sbjct: 589 KKEDIF-QDFTQTSAVFVDPFSLEELPRMVEGRTFGRFGSSK 629
>SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 28.7 bits (61), Expect = 9.9
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 67 ERKQVLPQIITRKEEHHSDSEKEVDDPRLRRLRNIAQSPPRRAEHKPEI--IDAEPEAE 123
E Q+ + T EE EKE D + + +SPP R +H+P + +D P E
Sbjct: 282 EAPQLKEEPNTDPEEKEGPDEKENADEVFQERSKLDRSPPLRKKHEPFVAPLDDTPVPE 340
>SB_7123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 66 PERKQVLPQIITRKEEHHSDSEKEVDDPRLRRLRN 100
P+ K VLP + K S SE V PRLRRLR+
Sbjct: 201 PKGKVVLPNVPLTKTPSTS-SEDSVHTPRLRRLRS 234
>SB_3166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 28.7 bits (61), Expect = 9.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 377 VLPKVMQVKKFGRSGRTKYTHLVDQDTTEFDSAW 410
+ PK++ V F R+ H V Q EFDS W
Sbjct: 298 IFPKLLNVVCFSRTLDNVGNHFVIQTLLEFDSVW 331
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.130 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,609,495
Number of Sequences: 59808
Number of extensions: 413054
Number of successful extensions: 1058
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1050
Number of HSP's gapped (non-prelim): 15
length of query: 441
length of database: 16,821,457
effective HSP length: 84
effective length of query: 357
effective length of database: 11,797,585
effective search space: 4211737845
effective search space used: 4211737845
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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