Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001438-TA|BGIBMGA001438-PA|IPR009730|Micro-fibrillar-
associated 1, C-terminal
(441 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-8|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 206 3e-53
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 2.8
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 2.8
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 2.8
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 2.8
AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 30 2.8
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 30 2.8
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 30 2.8
AL033536-2|CAA22139.1| 319|Caenorhabditis elegans Hypothetical ... 30 3.7
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 30 3.7
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 30 3.7
Z81038-15|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 29 6.5
Z81038-14|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 29 6.5
Z50874-11|CAA90766.1| 259|Caenorhabditis elegans Hypothetical p... 29 6.5
Z96102-2|CAI79216.1| 746|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z78536-1|CAB01715.2| 417|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 29 8.6
>Z79755-8|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 206 bits (502), Expect = 3e-53
Identities = 98/259 (37%), Positives = 152/259 (58%), Gaps = 3/259 (1%)
Query: 185 SSDTEYTDSEEDTGPRVKPVFVRASERMTVAERERKMXXXXXXXXXXXXXXXXXXXXXXX 244
SS+ E +D ++D PR+KP+F R +R+T+ E E++
Sbjct: 208 SSEEEDSDEDDDPVPRLKPIFTRKKDRITLQEAEKEKEKEILKKIEDEKRAEERKRESAK 267
Query: 245 XXXXTIRSEQRGAQGEQKEG-NINDVCTDDENDELEYEAWKLXXXXXXXXXXXXXXXXXX 303
++ E+ + + ++ +++ V TDDE + + YEAWKL
Sbjct: 268 LVEKVLQEEEAAEKRKTEDRVDLSSVLTDDETENMAYEAWKLREMKRLKRNRDEREEAAR 327
Query: 304 XXLTLERLRNMTEDERRLEQRINPKVVTNKAVKGKYKFLQKYYHRGAFYLDKEEDVFKQD 363
L+++ M+E+ER R+NPKV+TNK KGKYKFLQKY+HRGAF+LD+E++V K++
Sbjct: 328 EKAELDKIHAMSEEERLKYLRLNPKVITNKQDKGKYKFLQKYFHRGAFFLDEEDEVLKRN 387
Query: 364 FSGPTLDDHFDKTVLPKVMQVKKFGRSGRTKYTHLVDQDTTEFDSAW--SNETSAARLTN 421
F+ T DD FDKT+LPKVMQVK FG++ RTKYTHL ++DTT+ W +N+ ++ T
Sbjct: 388 FAEATNDDQFDKTILPKVMQVKNFGKASRTKYTHLTEEDTTDHQGVWASTNQLNSQFSTK 447
Query: 422 FRGGMKQVFEKPSAERKHN 440
GG + VFE+P+ +++ N
Sbjct: 448 RAGGSRPVFERPATKKRKN 466
Score = 57.6 bits (133), Expect = 2e-08
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 14 TAGAIPIRNEKGEISMQKVKVQRYISGKKPDYAQGMXXXXXXXXXXFIEQQRPERKQVLP 73
T GAIPI+NEKG+ MQKVKV RY++GK P+YA+ E R +
Sbjct: 25 TLGAIPIKNEKGQTVMQKVKVSRYVAGKAPEYARNYDSDSSESDR---ETDRDD------ 75
Query: 74 QIITRKEEHHSDSEKEVDDPRLRRLRNIAQSPPRRAEHKPEIIDAEPEAESE 125
R+ +S E D R RR + + RR KPE++ + SE
Sbjct: 76 ---DRRRRRRRESSDEEDRRRHRRHEDYGR---RRQVEKPEVLGKVEDESSE 121
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 62 EQQRPERKQVLPQIITRKEEHHSDSEKEVDDPRLRRLRNIAQSPPRRAEHKPE 114
E + P +K+ PQ + K + EK + + +++ + P +AE KP+
Sbjct: 1683 EVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPK 1735
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 62 EQQRPERKQVLPQIITRKEEHHSDSEKEVDDPRLRRLRNIAQSPPRRAEHKPE 114
E + P +K+ PQ + K + EK + + +++ + P +AE KP+
Sbjct: 1683 EVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPK 1735
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 62 EQQRPERKQVLPQIITRKEEHHSDSEKEVDDPRLRRLRNIAQSPPRRAEHKPE 114
E + P +K+ PQ + K + EK + + +++ + P +AE KP+
Sbjct: 1683 EVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPK 1735
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 62 EQQRPERKQVLPQIITRKEEHHSDSEKEVDDPRLRRLRNIAQSPPRRAEHKPE 114
E + P +K+ PQ + K + EK + + +++ + P +AE KP+
Sbjct: 1683 EVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPK 1735
>AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5c protein.
Length = 391
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 62 EQQRPERKQVLPQIITRKEEHHSDSEKEVD 91
E +RPE Q HHSDSE+E+D
Sbjct: 118 EPERPESHQSAHSAAVSNASHHSDSEEELD 147
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 62 EQQRPERKQVLPQIITRKEEHHSDSEKEVD 91
E +RPE Q HHSDSE+E+D
Sbjct: 253 EPERPESHQSAHSAAVSNASHHSDSEEELD 282
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 62 EQQRPERKQVLPQIITRKEEHHSDSEKEVD 91
E +RPE Q HHSDSE+E+D
Sbjct: 298 EPERPESHQSAHSAAVSNASHHSDSEEELD 327
>AL033536-2|CAA22139.1| 319|Caenorhabditis elegans Hypothetical
protein Y53C10A.5 protein.
Length = 319
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 353 LDKEEDVFKQDFSGPTLDDHFDKTVLPKVMQ 383
L KEE+ FK PTLD+ D LP +++
Sbjct: 25 LKKEEERFKSPDPAPTLDEEVDIDTLPSMLE 55
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 29.9 bits (64), Expect = 3.7
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
Query: 20 IRNEKGEISMQKVKVQRYISGKKPDYAQ--GMXXXXXXXXXXFIEQQRPERKQVLPQIIT 77
I NE+ E QK+K +R GK P + E++ P + +
Sbjct: 27 IENERKEKRAQKLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKSRKRA 86
Query: 78 RKEEHHSDSEKEVDDPRLRRLRNIAQSPPRRAEHKPEIIDAEPEAESE 125
+ E +S++E D + + + + Q +++ K +E E E
Sbjct: 87 KSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDE 134
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 29.9 bits (64), Expect = 3.7
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
Query: 20 IRNEKGEISMQKVKVQRYISGKKPDYAQ--GMXXXXXXXXXXFIEQQRPERKQVLPQIIT 77
I NE+ E QK+K +R GK P + E++ P + +
Sbjct: 27 IENERKEKRAQKLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKSRKRA 86
Query: 78 RKEEHHSDSEKEVDDPRLRRLRNIAQSPPRRAEHKPEIIDAEPEAESE 125
+ E +S++E D + + + + Q +++ K +E E E
Sbjct: 87 KSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDE 134
>Z81038-15|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 62 EQQRPERKQVLPQIITRKEEHHSDSEKEVDDPRLRRLRNIAQSPPRRAEHKPEIIDAEPE 121
++++P KQ P ++ +KE+ S S+ DD + + ++ P+++ K + D +
Sbjct: 441 DEKKPVVKQT-PNVVPKKEKAASSSDDSSDDEKKPTAKPTPKATPKQSAKKADSSDDSSD 499
Query: 122 AES 124
E+
Sbjct: 500 DEA 502
>Z81038-14|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 62 EQQRPERKQVLPQIITRKEEHHSDSEKEVDDPRLRRLRNIAQSPPRRAEHKPEIIDAEPE 121
++++P KQ P ++ +KE+ S S+ DD + + ++ P+++ K + D +
Sbjct: 716 DEKKPVVKQT-PNVVPKKEKAASSSDDSSDDEKKPTAKPTPKATPKQSAKKADSSDDSSD 774
Query: 122 AES 124
E+
Sbjct: 775 DEA 777
>Z50874-11|CAA90766.1| 259|Caenorhabditis elegans Hypothetical
protein R10E4.5 protein.
Length = 259
Score = 29.1 bits (62), Expect = 6.5
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 345 YYHRGAFYLDKEEDVFKQDFSGPTLDDHFDKTVLPKV 381
+Y R A YL K + K DFSG D LP V
Sbjct: 80 FYKRKAVYLQKTAKILKDDFSGDIPDSLDGLCALPGV 116
>Z96102-2|CAI79216.1| 746|Caenorhabditis elegans Hypothetical
protein H39E23.3 protein.
Length = 746
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/66 (19%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 62 EQQRPERKQV-LPQIITRKEEHHSDSEKEVDDPRLRRLRNIAQSPPRRAEHKPEIIDAEP 120
E++ P +++ P+ + E + +++E D P+ + ++P +R KP+ A+
Sbjct: 182 EKKAPAKREADKPKTESADSEKKAPAKREADKPKTESADSEKKAPAKRESDKPKTESADS 241
Query: 121 EAESEI 126
E ++ +
Sbjct: 242 EKKAPV 247
>Z78536-1|CAB01715.2| 417|Caenorhabditis elegans Hypothetical
protein C07A4.2 protein.
Length = 417
Score = 28.7 bits (61), Expect = 8.6
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 354 DKEEDVFKQDFSGPTLDDHFDKTVLP----KVMQVKKFGRSGRTKYTHLV--DQDTTEFD 407
++ E +F + F G T+ + D VLP K + + K +S + + T+ D D T
Sbjct: 116 EQGEKLFVKVFIGSTVLTYPDYQVLPARSTKSVAILKTNKSSKIRLTYSTETDDDGTSKT 175
Query: 408 SAWSNETSAARLTNFRGGMKQVFEKPSAERKHNV 441
+ S L + RGG F + + ++K+++
Sbjct: 176 AIEKTHWSNTILRDSRGGALDFFSRLTNQKKYDL 209
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 28.7 bits (61), Expect = 8.6
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 308 LERLRNMTEDERRLEQRINPKVVTNKAVKGKYKFLQKYYHRGAFYLDKEEDVFKQDFSGP 367
LE+LRNM+E E+ + R N + GKY+ + L ++E + KQ P
Sbjct: 643 LEKLRNMSETEKLM--RFNKLETAADLLNGKYEECSDLIKKLRMSLSEKESLRKQAILSP 700
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 61 IEQQRPERKQVLPQIITRKEEHHSDSEKEVDDPRLRRLRNIAQSPPRRAEHKP 113
I ++ P + TR++ H SD+ PR R R+ SPPRR P
Sbjct: 167 IREESPSARNRRSPPRTRRDRHDSDNSP----PRNRSRRDSDNSPPRRRPSSP 215
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.130 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,628,815
Number of Sequences: 27539
Number of extensions: 315491
Number of successful extensions: 951
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 909
Number of HSP's gapped (non-prelim): 50
length of query: 441
length of database: 12,573,161
effective HSP length: 84
effective length of query: 357
effective length of database: 10,259,885
effective search space: 3662778945
effective search space used: 3662778945
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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