Silkworm BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001433-TA|BGIBMGA001433-PA|undefined
         (73 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25720| Best HMM Match : Enterotoxin_HS (HMM E-Value=1.9)            28   0.94 
SB_57607| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   0.94 
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)                   26   3.8  
SB_11872| Best HMM Match : C1_2 (HMM E-Value=5.5)                      26   5.0  
SB_34801| Best HMM Match : Vicilin_N (HMM E-Value=0.3)                 25   8.8  
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 25   8.8  
SB_22164| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   8.8  
SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   8.8  
SB_31661| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   8.8  

>SB_25720| Best HMM Match : Enterotoxin_HS (HMM E-Value=1.9)
          Length = 706

 Score = 28.3 bits (60), Expect = 0.94
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)

Query: 34  KHVWTDDMTRVELGSDDVNREVQD 57
           + VW DD+ R   G+DDVNR + D
Sbjct: 656 RRVWIDDVVR---GTDDVNRVIDD 676


>SB_57607| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 435

 Score = 28.3 bits (60), Expect = 0.94
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 28  VAWCDAKHVWTDDMTRVELGSDDVNREVQDSIDTFMHTVELQPS 71
           + WC   H W  D        DD   E +++ D+ +H++   P+
Sbjct: 86  IGWCARDHPWNRDYLEQNDDIDDDETEDENNDDSLLHSLLNPPT 129


>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
          Length = 807

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 10/44 (22%), Positives = 21/44 (47%)

Query: 28  VAWCDAKHVWTDDMTRVELGSDDVNREVQDSIDTFMHTVELQPS 71
           + WC   H W  D    +   DD   + +++ D+ +H++   P+
Sbjct: 460 IGWCARDHPWNRDDLGQDDDIDDDETDDENNDDSLLHSLLNPPT 503


>SB_11872| Best HMM Match : C1_2 (HMM E-Value=5.5)
          Length = 425

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 32  DAKHVWTDDMTRVELGSDDVNREVQDSIDTFMHTVELQPSM 72
           ++KH+ ++ MT     + +V +E Q S  T +HT   +PS+
Sbjct: 278 ESKHICSN-MTSQPAMNKNVRKETQPSCVTVVHTTLREPSL 317


>SB_34801| Best HMM Match : Vicilin_N (HMM E-Value=0.3)
          Length = 451

 Score = 25.0 bits (52), Expect = 8.8
 Identities = 11/38 (28%), Positives = 16/38 (42%)

Query: 28  VAWCDAKHVWTDDMTRVELGSDDVNREVQDSIDTFMHT 65
           + W    H W+ D T    G+D    E +D  +T   T
Sbjct: 177 IGWRSRDHPWSRDYTEQNDGADSDETEDEDEDNTLPTT 214


>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 2629

 Score = 25.0 bits (52), Expect = 8.8
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 34   KH-VWTDDMTRVELGSDDVNREVQDSIDTFMHTVELQPS 71
            KH V+T+ + +V L  +D  R + D  ++ ++ +   PS
Sbjct: 1702 KHDVYTETVNKVALSHEDDKRVICDDAESSLNRITFNPS 1740


>SB_22164| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 142

 Score = 25.0 bits (52), Expect = 8.8
 Identities = 8/18 (44%), Positives = 14/18 (77%)

Query: 54  EVQDSIDTFMHTVELQPS 71
           ++Q+S+D F  TV++ PS
Sbjct: 85  KIQESLDLFQRTVQINPS 102


>SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1998

 Score = 25.0 bits (52), Expect = 8.8
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 34   KH-VWTDDMTRVELGSDDVNREVQDSIDTFMHTVELQPS 71
            KH V+T+ + +V L  +D  R + D  ++ ++ +   PS
Sbjct: 1334 KHDVYTETVNKVALSHEDDKRVICDDAESSLNRITFNPS 1372


>SB_31661| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 864

 Score = 25.0 bits (52), Expect = 8.8
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 34 KH-VWTDDMTRVELGSDDVNREVQDSIDTFMHTVELQPS 71
          KH V+T+ + +V L  +D  R + D  ++ ++ +   PS
Sbjct: 48 KHDVYTETVNKVALSHEDDKRVICDDAESSLNRITFNPS 86


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.324    0.132    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,123,458
Number of Sequences: 59808
Number of extensions: 64981
Number of successful extensions: 169
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 165
Number of HSP's gapped (non-prelim): 9
length of query: 73
length of database: 16,821,457
effective HSP length: 51
effective length of query: 22
effective length of database: 13,771,249
effective search space: 302967478
effective search space used: 302967478
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 52 (25.0 bits)