GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001433-TA|BGIBMGA001433-PA|undefined
         (73 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB000782-1|BAB46923.1|  470|Homo sapiens cerebral protein-10 pro...    30   1.3  
BC063844-1|AAH63844.1|  470|Homo sapiens family with sequence si...    29   1.7  
BC008970-1|AAH08970.2|  289|Homo sapiens FAM82C protein protein.       29   1.7  
AY358793-1|AAQ89153.1|  470|Homo sapiens SRLG3122 protein.             29   1.7  
AK025963-1|BAB15298.1|  246|Homo sapiens protein ( Homo sapiens ...    29   1.7  
AK001441-1|BAA91693.1|  470|Homo sapiens protein ( Homo sapiens ...    29   1.7  
AJ242719-1|CAC39480.1|  393|Homo sapiens putative TCPTP-interact...    29   1.7  

>AB000782-1|BAB46923.1|  470|Homo sapiens cerebral protein-10
           protein.
          Length = 470

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 26  MLVAWC-DAKHV-WTDDMTRVELGSDDVNREVQDSIDTFMHTVELQPSM 72
           +L  WC    H+ W +  T   L    ++  V+D++ +F+   ELQP +
Sbjct: 368 LLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQPGV 416


>BC063844-1|AAH63844.1|  470|Homo sapiens family with sequence
           similarity 82, member C protein.
          Length = 470

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 26  MLVAWC-DAKHV-WTDDMTRVELGSDDVNREVQDSIDTFMHTVELQP 70
           +L  WC    H+ W +  T   L    ++  V+D++ +F+   ELQP
Sbjct: 368 LLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQP 414


>BC008970-1|AAH08970.2|  289|Homo sapiens FAM82C protein protein.
          Length = 289

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 26  MLVAWC-DAKHV-WTDDMTRVELGSDDVNREVQDSIDTFMHTVELQP 70
           +L  WC    H+ W +  T   L    ++  V+D++ +F+   ELQP
Sbjct: 187 LLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQP 233


>AY358793-1|AAQ89153.1|  470|Homo sapiens SRLG3122 protein.
          Length = 470

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 26  MLVAWC-DAKHV-WTDDMTRVELGSDDVNREVQDSIDTFMHTVELQP 70
           +L  WC    H+ W +  T   L    ++  V+D++ +F+   ELQP
Sbjct: 368 LLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQP 414


>AK025963-1|BAB15298.1|  246|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22310 fis, clone HRC05110. ).
          Length = 246

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 26  MLVAWC-DAKHV-WTDDMTRVELGSDDVNREVQDSIDTFMHTVELQP 70
           +L  WC    H+ W +  T   L    ++  V+D++ +F+   ELQP
Sbjct: 162 LLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQP 208


>AK001441-1|BAA91693.1|  470|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10579 fis, clone NT2RP2003446. ).
          Length = 470

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 26  MLVAWC-DAKHV-WTDDMTRVELGSDDVNREVQDSIDTFMHTVELQP 70
           +L  WC    H+ W +  T   L    ++  V+D++ +F+   ELQP
Sbjct: 368 LLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQP 414


>AJ242719-1|CAC39480.1|  393|Homo sapiens putative TCPTP-interacting
           protein protein.
          Length = 393

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 26  MLVAWC-DAKHV-WTDDMTRVELGSDDVNREVQDSIDTFMHTVELQP 70
           +L  WC    H+ W +  T   L    ++  V+D++ +F+   ELQP
Sbjct: 291 LLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQP 337


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.324    0.132    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,985,691
Number of Sequences: 224733
Number of extensions: 278940
Number of successful extensions: 930
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 930
Number of HSP's gapped (non-prelim): 7
length of query: 73
length of database: 73,234,838
effective HSP length: 52
effective length of query: 21
effective length of database: 61,548,722
effective search space: 1292523162
effective search space used: 1292523162
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 57 (27.1 bits)