GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001433-TA|BGIBMGA001433-PA|undefined
         (73 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089653-1|AAL90391.1|  376|Drosophila melanogaster RH12051p pro...    27   3.2  
AY060911-1|AAL28459.1|  376|Drosophila melanogaster GM05661p pro...    27   3.2  
AE014296-2614|AAF49552.1|  376|Drosophila melanogaster CG5904-PA...    27   3.2  
BT022488-1|AAY54904.1|  446|Drosophila melanogaster IP11787p pro...    26   7.3  
AE014297-1215|AAF54567.2|  446|Drosophila melanogaster CG14694-P...    26   7.3  
AF217400-1|AAF73385.1|  237|Drosophila melanogaster unknown prot...    25   9.7  

>AY089653-1|AAL90391.1|  376|Drosophila melanogaster RH12051p
           protein.
          Length = 376

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 24  FQMLVAWCDAKHVWTDDMTRVELGSDDVNREVQDSIDTFMHTVELQPS 71
           F+ +V W D K VW   +   +   D+ N +  + I    H  +  PS
Sbjct: 271 FEQMVLWTDQKKVWRFPINNEQDWEDEHNVDFSEHIFLEQHLEDWCPS 318


>AY060911-1|AAL28459.1|  376|Drosophila melanogaster GM05661p
           protein.
          Length = 376

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 24  FQMLVAWCDAKHVWTDDMTRVELGSDDVNREVQDSIDTFMHTVELQPS 71
           F+ +V W D K VW   +   +   D+ N +  + I    H  +  PS
Sbjct: 271 FEQMVLWTDQKKVWRFPINNEQDWEDEHNVDFSEHIFLEQHLEDWCPS 318


>AE014296-2614|AAF49552.1|  376|Drosophila melanogaster CG5904-PA
           protein.
          Length = 376

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 24  FQMLVAWCDAKHVWTDDMTRVELGSDDVNREVQDSIDTFMHTVELQPS 71
           F+ +V W D K VW   +   +   D+ N +  + I    H  +  PS
Sbjct: 271 FEQMVLWTDQKKVWRFPINNEQDWEDEHNVDFSEHIFLEQHLEDWCPS 318


>BT022488-1|AAY54904.1|  446|Drosophila melanogaster IP11787p
           protein.
          Length = 446

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 11  KMEVRCSLFKLLLFQMLVAWCDAKHVWTDDMTRVELG 47
           ++  R SL  + L  +L   C     WTDD+    LG
Sbjct: 308 RLNTRSSLLSMALLSVLEGGCVLLSCWTDDIYLSYLG 344


>AE014297-1215|AAF54567.2|  446|Drosophila melanogaster CG14694-PA
           protein.
          Length = 446

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 11  KMEVRCSLFKLLLFQMLVAWCDAKHVWTDDMTRVELG 47
           ++  R SL  + L  +L   C     WTDD+    LG
Sbjct: 308 RLNTRSSLLSMALLSVLEGGCVLLSCWTDDIYLSYLG 344


>AF217400-1|AAF73385.1|  237|Drosophila melanogaster unknown
           protein.
          Length = 237

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 11/46 (23%), Positives = 20/46 (43%)

Query: 24  FQMLVAWCDAKHVWTDDMTRVELGSDDVNREVQDSIDTFMHTVELQ 69
           F+ +V W D K VW   +   +   D+ N +  + I    H  + +
Sbjct: 101 FEQMVLWTDQKKVWRFPINNEQDWEDEHNVDFSEHIFLEQHLEDFE 146


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.324    0.132    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,968,364
Number of Sequences: 52641
Number of extensions: 88372
Number of successful extensions: 225
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 219
Number of HSP's gapped (non-prelim): 6
length of query: 73
length of database: 24,830,863
effective HSP length: 53
effective length of query: 20
effective length of database: 22,040,890
effective search space: 440817800
effective search space used: 440817800
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 53 (25.4 bits)