Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001432-TA|BGIBMGA001432-PA|undefined
(126 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23540.1 68414.m02960 protein kinase family protein contains ... 36 0.011
At5g43770.1 68418.m05353 proline-rich family protein contains pr... 33 0.044
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 33 0.044
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 33 0.058
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 33 0.076
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 32 0.13
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 31 0.23
At2g10940.2 68415.m01168 protease inhibitor/seed storage/lipid t... 31 0.31
At2g10940.1 68415.m01167 protease inhibitor/seed storage/lipid t... 31 0.31
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 30 0.41
At2g34210.1 68415.m04186 KOW domain-containing transcription fac... 30 0.41
At3g28790.1 68416.m03593 expressed protein 30 0.54
At1g28630.1 68414.m03526 expressed protein ; expression supporte... 29 0.71
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 29 0.94
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 29 1.2
At4g29310.1 68417.m04190 expressed protein 29 1.2
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 29 1.2
At3g25500.1 68416.m03171 formin homology 2 domain-containing pro... 29 1.2
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 28 1.6
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 28 1.6
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 28 1.6
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 28 1.6
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 28 1.6
At2g32300.1 68415.m03949 uclacyanin I identical to uclacyanin I ... 28 1.6
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 28 1.6
At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 1.6
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 1.6
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 28 2.2
At5g06640.1 68418.m00750 proline-rich extensin-like family prote... 28 2.2
At4g32490.1 68417.m04625 plastocyanin-like domain-containing pro... 28 2.2
At4g08630.1 68417.m01420 expressed protein ; expression supporte... 28 2.2
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 28 2.2
At5g61090.1 68418.m07665 proline-rich family protein contains pr... 27 2.9
At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family... 27 2.9
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 27 2.9
At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1 (MSH... 27 2.9
At3g02670.1 68416.m00258 proline-rich family protein contains pr... 27 2.9
At1g80760.1 68414.m09475 major intrinsic family protein / MIP fa... 27 2.9
At1g63550.1 68414.m07184 hypothetical protein low similarity to ... 27 2.9
At1g61080.1 68414.m06877 proline-rich family protein 27 2.9
At4g38080.1 68417.m05378 hydroxyproline-rich glycoprotein family... 27 3.8
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 27 3.8
At4g34440.1 68417.m04894 protein kinase family protein contains ... 27 3.8
At3g56130.2 68416.m06239 biotin/lipoyl attachment domain-contain... 27 3.8
At3g56130.1 68416.m06238 biotin/lipoyl attachment domain-contain... 27 3.8
At1g14280.1 68414.m01693 phytochrome kinase, putative contains s... 27 3.8
At5g52240.1 68418.m06484 cytochrome b5 domain-containing protein... 27 5.0
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 27 5.0
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 27 5.0
At3g24550.1 68416.m03083 protein kinase family protein contains ... 27 5.0
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 5.0
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 27 5.0
At1g47660.1 68414.m05295 hypothetical protein 27 5.0
At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identica... 27 5.0
At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7) 26 6.6
At5g48360.1 68418.m05975 formin homology 2 domain-containing pro... 26 6.6
At4g12770.1 68417.m02004 auxilin-related low similarity to SP|Q2... 26 6.6
At4g08350.1 68417.m01380 KOW domain-containing transcription fac... 26 6.6
At2g43800.1 68415.m05445 formin homology 2 domain-containing pro... 26 6.6
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 26 6.6
At1g45688.1 68414.m05202 expressed protein 26 6.6
At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein ... 26 6.6
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 26 8.8
At4g23700.1 68417.m03411 cation/hydrogen exchanger, putative (CH... 26 8.8
At2g16030.1 68415.m01838 expressed protein 26 8.8
At1g63600.1 68414.m07189 protein kinase-related low similarity t... 26 8.8
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 35.5 bits (78), Expect = 0.011
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 9 IGTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
+G P P TAP P++PS+ + LP P + PA S + P
Sbjct: 4 LGESPSSSPPAPPADTAPPPETPSENSALPPVDSSPPSPPADSSSTPP 51
>At5g43770.1 68418.m05353 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 187
Score = 33.5 bits (73), Expect = 0.044
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 13 PLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGGW 59
P +G P P PVP SPS P +P TP P P T D P W
Sbjct: 116 PPLGPPQTPGPEFPVPPSPSPP--MPDTPNPPT--PKTPPDVVPPIW 158
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 33.5 bits (73), Expect = 0.044
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 21 PVPTAPV--PDSPSQPAILPVTPGQPANIPAT 50
P PT PV P +P+ P + P TP P IP T
Sbjct: 218 PTPTPPVVTPPTPTPPVVTPPTPTPPTPIPET 249
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 21 PVPTAPV--PDSPSQPAILPVTPGQPANIPATSGDSAP 56
P PT PV P +P+ P + P TP P P T P
Sbjct: 208 PTPTPPVITPPTPTPPVVTPPTPTPPVVTPPTPTPPTP 245
Score = 31.5 bits (68), Expect = 0.18
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 21 PVPTAPV--PDSPSQPAILPVTPGQPANIPAT 50
P PT PV P +P+ P I P TP P P T
Sbjct: 168 PTPTPPVVTPPTPTPPVITPPTPTPPVVTPPT 199
Score = 31.5 bits (68), Expect = 0.18
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 21 PVPTAPV--PDSPSQPAILPVTPGQPANIPAT 50
P PT PV P +P+ P I P TP P P T
Sbjct: 188 PTPTPPVVTPPTPTPPVITPPTPTPPVITPPT 219
Score = 31.5 bits (68), Expect = 0.18
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 21 PVPTAPV--PDSPSQPAILPVTPGQPANIPAT 50
P PT PV P +P+ P I P TP P P T
Sbjct: 198 PTPTPPVITPPTPTPPVITPPTPTPPVVTPPT 229
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 21 PVPTAPV--PDSPSQPAILPVTPGQPANIPAT 50
P PT PV P +P+ P + P TP P P T
Sbjct: 178 PTPTPPVITPPTPTPPVVTPPTPTPPVITPPT 209
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQPANIPAT 50
P P P +P+ P + P TP P P T
Sbjct: 160 PTPCPPPTPTPTPPVVTPPTPTPPVITPPT 189
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 33.1 bits (72), Expect = 0.058
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 13 PLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSG 52
P V PT P P PS P + P TP P ++P SG
Sbjct: 205 PSVPSPPDVTPTPPTPSVPSPPDVTP-TPPTPPSVPTPSG 243
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
P+P+ P P SP P P P P P S P
Sbjct: 173 PMPSPPPPVSPPPPTPTPSVPSPPDVTPTPPTPSVP 208
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQPANIPA 49
P PT PVP P PV+P P P+
Sbjct: 163 PSPTPPVPTDPMPSPPPPVSPPPPTPTPS 191
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/46 (30%), Positives = 17/46 (36%)
Query: 11 TVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
T P+ P P+ P P P P TP P+ P D P
Sbjct: 130 TPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMP 175
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 13 PLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPA 49
P V PVPT P+P P P + P P ++P+
Sbjct: 160 PSVPSPTPPVPTDPMPSPP--PPVSPPPPTPTPSVPS 194
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Query: 13 PLVGMAGQPVPTAPVPDSPSQPAILPVTP 41
P V PT P P PS P + P P
Sbjct: 190 PSVPSPPDVTPTPPTPSVPSPPDVTPTPP 218
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 32.7 bits (71), Expect = 0.076
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 12 VPLVGMAGQP-VPTAP--VPDSPSQPAILPVTPGQPANIPATSGDSAP 56
VP++ A P P++P P +PS P P TP P + P+ S P
Sbjct: 116 VPVLAAAPSPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLP 163
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 11 TVPLVGMAGQPVPTAPVPDSPSQPAILPVTPG---QPANIPATSGDSAPGG 58
T P + M P+P AP P + P ++P+TP P +P P G
Sbjct: 68 TPPPMPMTPPPMPMAPPPMPMASPPMMPMTPSTSPSPLTVPDMPSPPMPSG 118
>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 182
Score = 31.1 bits (67), Expect = 0.23
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 6 YITIGTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIP 48
Y+ +VP + VP+ VP P I P TPG N P
Sbjct: 58 YVPTPSVPSPSVPTPSVPSPSVPSPNPTPVIPPRTPGSSGNCP 100
>At2g10940.2 68415.m01168 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
proline-rich cell wall protein [Medicago sativa]
GI:3818416; contains Pfam profile PF00234 Protease
inhibitor/seed storage/LTP family
Length = 291
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 12 VPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIP 48
VP V + PVP VP P P +P P P IP
Sbjct: 48 VPPVTVPKLPVPPVTVPKLPVPPVTVPKLPVPPVTIP 84
Score = 29.1 bits (62), Expect = 0.94
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 7 ITIGTVPLVGMAGQPVPTAPVPD--SPSQPAILPVTPGQPANIPATSGDSAP 56
+T+ +PL ++G P+P P+ P P + P+ P PAT G P
Sbjct: 141 VTVPKLPLPPISGLPIPPVVGPNLPLPPLPIVGPILP-PGTTPPATGGKDCP 191
>At2g10940.1 68415.m01167 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
proline-rich cell wall protein [Medicago sativa]
GI:3818416; contains Pfam profile PF00234 Protease
inhibitor/seed storage/LTP family
Length = 291
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 12 VPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIP 48
VP V + PVP VP P P +P P P IP
Sbjct: 48 VPPVTVPKLPVPPVTVPKLPVPPVTVPKLPVPPVTIP 84
Score = 29.1 bits (62), Expect = 0.94
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 7 ITIGTVPLVGMAGQPVPTAPVPD--SPSQPAILPVTPGQPANIPATSGDSAP 56
+T+ +PL ++G P+P P+ P P + P+ P PAT G P
Sbjct: 141 VTVPKLPLPPISGLPIPPVVGPNLPLPPLPIVGPILP-PGTTPPATGGKDCP 191
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 30.3 bits (65), Expect = 0.41
Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 3/101 (2%)
Query: 23 PTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGGWVLXXX--XXXXXXXXXLYPTLTE 80
PT+P SP+ PA P +PG P+ S S G Y
Sbjct: 1687 PTSP-SYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNA 1745
Query: 81 PVYKESPYSVRTIQDRGDSNHTMIRTPNFAPYYPTYAAIQP 121
+ SPYS + S +P+++P PTY+ P
Sbjct: 1746 RLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 1786
Score = 25.8 bits (54), Expect = 8.8
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 8/105 (7%)
Query: 23 PTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGGWVLXXXXXXXXXXXXLYPTLTEPV 82
PT+P SP+ P P +PG P T S+PG Y + T P
Sbjct: 1554 PTSP-GYSPTSPGYSPTSPGYSPTSP-TYSPSSPG---YSPTSPAYSPTSPSY-SPTSPS 1607
Query: 83 YK-ESP-YSVRTIQDRGDSNHTMIRTPNFAPYYPTYAAIQPPPLP 125
Y SP YS + S +P+++P P Y+ P P
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSP 1652
>At2g34210.1 68415.m04186 KOW domain-containing transcription factor
family protein
Length = 990
Score = 30.3 bits (65), Expect = 0.41
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 25 APVPDSPSQPAILPVTPGQPANIPATSGD 53
AP P +PS + LP TPG A P T D
Sbjct: 855 APSPMTPSSTSYLPTTPGGQAMTPGTDLD 883
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.9 bits (64), Expect = 0.54
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
P P+ P P +P+ P TP P+T S P
Sbjct: 281 PTPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPSTP 316
>At1g28630.1 68414.m03526 expressed protein ; expression supported
by MPSS
Length = 321
Score = 29.5 bits (63), Expect = 0.71
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 11/118 (9%)
Query: 16 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGGWV-LXXXXXXXXXXXXL 74
G+ P + +P + +QP++ P + + IP S D + L L
Sbjct: 42 GIFSSPAISEAIPSTNTQPSVFPCP--ESSTIPQISPDMQQQQQLNLPGPLEQSDLQRLL 99
Query: 75 YPTL--TEPVYKESPYSVRTIQDRG----DSNHTMIRTPNFAP--YYPTYAAIQPPPL 124
P + +EP + S + + + +S+H + PN Y P +A+QPPPL
Sbjct: 100 NPNMMYSEPDFSTSQQQQQLLCNSAGYLQESDHQGLLNPNMLNSFYEPDVSAMQPPPL 157
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.1 bits (62), Expect = 0.94
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 10 GTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 58
G+ P + P T P P SP P G P + P T PGG
Sbjct: 447 GSPPSPSIVPSPPSTTPSPGSPPTSPTTPTPGGSPPSSPTT---PTPGG 492
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 8 TIGTVPLVGMAGQPVPTAPVPD-SPSQPAILPVTPGQPANIPATSGDSAPGG 58
T T P G + PT P P SP P G P + P T +PGG
Sbjct: 470 TSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSPPSSPTT---PSPGG 518
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 23 PTAPVPD-SPSQPAILPVTPGQPANIPATSGDSAPGG 58
PT P P SP P+I +P P +P+ +PGG
Sbjct: 414 PTTPSPGGSPPSPSI---SPSPPITVPSPPTTPSPGG 447
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 23 PTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
P +P +PS P P TP P P + G ++P
Sbjct: 546 PPSPSSPTPSSPIPSPPTPSTPPT-PISPGQNSP 578
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 19 GQPVPTAPVPDSPS-QPAILPVTPGQPANIPATSGDSAPGG 58
G P PT+P +P P P TP + P++ PGG
Sbjct: 466 GSP-PTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGG 505
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 21 PVPTAPVPDSPSQ--PAILPVTPGQPANIPATSGDS 54
PVP PVPD P P +LP P + A++ DS
Sbjct: 211 PVPKLPVPDLPLPLVPPLLPPGPQKSASLHNKKSDS 246
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQP 44
PVP PVP P P + P+ PG P
Sbjct: 358 PVPLPPVPGLPGIPPV-PLIPGIP 380
>At4g29310.1 68417.m04190 expressed protein
Length = 424
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 31 PSQPAILPVTPGQPANIPATSGDSAPG 57
PSQ A+LP++ A+ P S SAPG
Sbjct: 48 PSQKALLPLSSFSDASSPPESSTSAPG 74
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 13 PLVGMAGQPVPTAPVPDSPSQ---PAILPVTPGQPANIP 48
P V P P+ P P PS P P TPG N P
Sbjct: 57 PSVPTPSVPTPSVPTPSVPSPNPTPVTPPRTPGSSGNCP 95
>At3g25500.1 68416.m03171 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 1051
Score = 28.7 bits (61), Expect = 1.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 107 PNFAPYYPTYAAIQPPPLP 125
PN +P++P Y + PPP P
Sbjct: 62 PNASPFFPLYPSSPPPPSP 80
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGD 53
P PT P P PA P +PA PA G+
Sbjct: 101 PAPTPPKPKPAPAPAPTPAPKPKPAPKPAPGGE 133
Score = 25.8 bits (54), Expect = 8.8
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 20 QPVPTAPVPD-----SPSQPAILPVTPGQPANIPATSGDSAPGGWV 60
+P PT P P +P +P P PA P + APGG V
Sbjct: 89 KPAPTPPNPKPTPAPTPPKPKPAPAPAPTPAPKPKPAPKPAPGGEV 134
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 28.3 bits (60), Expect = 1.6
Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 8/119 (6%)
Query: 11 TVPLVGMAGQPVPTAPVPDSPS-QPAILPVTPGQPANIPATSGDSAPGGWVLXXXXXXXX 69
T+P A +P A P +PS +P LP TP +P P T P +
Sbjct: 37 TLPSPSPATKPPSPALKPPTPSYKPPTLPTTPIKP---PTTKPPVKPPTIPVTPVKPPVS 93
Query: 70 XXXXLYPTLTEPVYKESPYSVR--TIQDRGDSNHT-MIRTPNFAPYY-PTYAAIQPPPL 124
P + P YK +V+ ++Q T ++ P +P PT +Q PP+
Sbjct: 94 TPPIKLPPVQPPTYKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPPVQSPPV 152
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 21 PVPTAPVPD---SPSQPAILPVTPG-QPANIPAT 50
P PT P P P PA+ P TP +P +P T
Sbjct: 34 PTPTLPSPSPATKPPSPALKPPTPSYKPPTLPTT 67
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQPANIP 48
P PT+P P SP P+ P +P P+ P
Sbjct: 67 PPPTSPPPPSPPPPSPPPPSPPPPSPPP 94
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 1 MHDKKYITIGTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPA 45
+H + + P P P +P P SP P+ P +P PA
Sbjct: 52 VHQSAIVVVVDEPPPPPPTSPPPPSPPPPSPPPPSPPPPSPPPPA 96
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 11 TVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
+ P+ +P P AP P A VT P +PAT S P
Sbjct: 115 SAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTP 160
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 23 PTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
P A P S QPA P QPA PA+ ++ P
Sbjct: 237 PVARPPASAGQPANPPAQTQQPAAAPASGPNANP 270
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 11 TVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
+ P+ +P P AP P A VT P +PAT S P
Sbjct: 115 SAPVAPAPTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTP 160
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 23 PTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
P A P S QPA P QPA PA+ ++ P
Sbjct: 237 PVARPPASAGQPANPPAQTQQPAAAPASGPNANP 270
>At2g32300.1 68415.m03949 uclacyanin I identical to uclacyanin I
GI:3399767 from [Arabidopsis thaliana]; contains Pfam
profile PF02298: Plastocyanin-like domain; identical to
cDNA uclacyanin I GI:3399766
Length = 261
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 7 ITIGTVPLVGMAGQ-PVP-TAPVPDSPSQPAILPVTPGQPAN-IPATSGDSA 55
+ + VP +A P+P T P ++PS ++LP+ P P N +P S S+
Sbjct: 117 LEVNVVPTATVAPTAPLPNTVPSLNAPSPSSVLPIQPLLPLNPVPVLSPSSS 168
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 28.3 bits (60), Expect = 1.6
Identities = 28/114 (24%), Positives = 36/114 (31%), Gaps = 2/114 (1%)
Query: 13 PLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGGWVLXXXXXXXXXXX 72
P+ P PT P + + P TP A P S + P V
Sbjct: 31 PVTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPA-VTPTSPPAPKVAP 89
Query: 73 XLYPTLTEPVYKES-PYSVRTIQDRGDSNHTMIRTPNFAPYYPTYAAIQPPPLP 125
+ P P +S P S T+ S +P P P A PPP P
Sbjct: 90 VISPATPPPQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAP 143
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 13 PLVGMAGQPVPTAPV--PDSPSQPAILPVTPGQPAN-IPATSGDSAP 56
P + G P T PV P PS P LP PAN + + +S+P
Sbjct: 78 PSPSLTGPPPTTIPVSPPPEPSPPPPLPTEAPPPANPVSSPPPESSP 124
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 23 PTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
PT P+ SPS P P P P ++PA S P
Sbjct: 134 PTTPIT-SPSPPTNPPPPPESPPSLPAPDPPSNP 166
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 18 AGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
A +PVP P P P P PV P P PA + AP
Sbjct: 92 APKPVP-CPSPPKPPAPTPKPVPPHGPPPKPAPAPTPAP 129
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 20 QPVPTAPVPDSPSQPAILPVTPGQP 44
Q P+ P+PD+P QP P P P
Sbjct: 48 QSTPSPPLPDTPDQP-FFPENPSTP 71
>At5g06640.1 68418.m00750 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 689
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 77 TLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNFAPYYPTYAAIQPPP 123
T+T Y SPYS +H ++P +AP+ Y I PPP
Sbjct: 44 TVTSYPYS-SPYSSPQTPHYNSPSHEH-KSPKYAPHPKPYVYISPPP 88
>At4g32490.1 68417.m04625 plastocyanin-like domain-containing
protein
Length = 221
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 4 KKYITIGTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPG 57
K ++ +P+ P PT V PS +L PG A + +G APG
Sbjct: 154 KALLSPAPIPVHKALSSPAPTPGV--DPSHSEVLAPAPGPAAAVRNLAGSVAPG 205
>At4g08630.1 68417.m01420 expressed protein ; expression supported
by MPSS
Length = 845
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 19 GQPVPTAPVPDSPSQPAILPVTPGQPANIP 48
G+P+ TAP+ S ++ PVTP +N P
Sbjct: 383 GRPIRTAPLMPSSVPISLKPVTPAFQSNTP 412
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSA 55
P P P P+SPS P+ +PA +PA S D +
Sbjct: 146 PPPPPPQPESPSSPSY-----PEPAPVPAPSDDDS 175
>At5g61090.1 68418.m07665 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420;
common family members: At4g18570, At3g25690, At4g04980
[Arabidopsis thaliana]
Length = 344
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 20 QPVPTAPVPDSPSQPAILPVTPGQPANIPA 49
+PVP P P++P +P TP P +PA
Sbjct: 117 RPVPARPTPETP-RPVTARPTPEIPRPVPA 145
>At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 162
Score = 27.5 bits (58), Expect = 2.9
Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 11/103 (10%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGGWVLXXXXXXXXXXXXLYPTLTE 80
PV ++P P SP P+ P T P P +SG + + Y +
Sbjct: 45 PVQSSPPPPSPPPPS-TPTTACPPPPSPPSSGGGSSYYYPPPSQSGGGSKYPPPYGGGGQ 103
Query: 81 PVYKESPYSVRTIQDRGDSNHTMIRTPN-FAPYYPTYAAIQPP 122
Y PYS N+ PN PY+P Y PP
Sbjct: 104 GYYYPPPYS---------GNYPTPPPPNPIVPYFPFYYHTPPP 137
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 18 AGQPVPTAPVPDSPSQPAILP--VTPGQPANIPATSGDSAPGG 58
A P P P P + PA P V P PA++P T+ AP G
Sbjct: 52 AATPAPATPPPAATPAPATTPPSVAP-SPADVP-TASPPAPEG 92
>At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1
(MSH6-1) (AGAA.3) identical to SP|O04716 DNA mismatch
repair protein MSH6-1 (AtMsh6-1) cress] {Arabidopsis
thaliana}
Length = 1324
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 18 AGQPVPTAPVPDSPSQPAILP-VTPGQPANIPATSGDSAP 56
+ P P +P P SPS P P + P +N+PA S P
Sbjct: 51 SNNPNPKSPSP-SPSPPKKTPKLNPNPSSNLPARSPSPGP 89
>At3g02670.1 68416.m00258 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 217
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 16 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
G+ G P+P P+P LP P P IP+ G P
Sbjct: 167 GIPGLPLPFPPLPPVTIPGLPLPFPPLPPVTIPSFPGFRFP 207
>At1g80760.1 68414.m09475 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 305
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 27 VPDSPSQPAILPVTPGQP 44
+P +PS PA P TPG P
Sbjct: 6 IPSTPSTPATTPGTPGAP 23
>At1g63550.1 68414.m07184 hypothetical protein low similarity to
receptor-like protein kinase 5 [Arabidopsis thaliana]
GI:13506747; contains Pfam profile: PF01657 Domain of
unknown function DUF26
Length = 299
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 10/42 (23%)
Query: 21 PVPTAPVPDSP----SQPAILPVTPGQPA------NIPATSG 52
P P+AP P SP S P+ LP TP P N+P SG
Sbjct: 228 PSPSAPPPRSPPPKSSPPSSLPQTPSPPLVFTPPQNVPNPSG 269
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 13 PLVGMAGQPVPTAPVPDSPSQPAILPVTPGQ---PANIPATSGDSAPGG 58
P G A P P P P + + P P P Q P+ P G+S GG
Sbjct: 541 PPPGTAAAPPPPPPPPGTQAAPPPPPPPPMQNRAPSPPPMPMGNSGSGG 589
>At4g38080.1 68417.m05378 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member: At2g22510
[Arabidopsis thaliana]
Length = 128
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 13 PLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
PL PVP+ P P + P P P QP +P P
Sbjct: 47 PLPKTTMPPVPSLPTPGQQTLPQPQPTLP-QPTGLPPMPSTQIP 89
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 23 PTAPVPDS-PSQPAILPVTPGQPANIPATSGDSAP 56
P PVP+S P PA + +P +PA DS P
Sbjct: 82 PPTPVPESSPPVPAPMVSSPVSSPPVPAPVADSPP 116
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 17 MAGQPVPTAPVPDSPSQPAILPVTPGQPANIPA 49
++ PVP APV DSP P PV PA P+
Sbjct: 102 VSSPPVP-APVADSPPAPVAAPVA-DVPAPAPS 132
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 23 PTAPVPDSPSQPA---ILPVTPGQPANIPATSGDSAP 56
P+ P++PS PA PVTP P P+ P
Sbjct: 82 PSPQTPENPSPPAPEGSTPVTPPAPPQTPSNQSPERP 118
>At3g56130.2 68416.m06239 biotin/lipoyl attachment
domain-containing protein low similarity to SP|Q06881
Biotin carboxyl carrier protein of acetyl-CoA
carboxylase (BCCP) {Anabaena sp.}; contains Pfam
profile PF00364: Biotin-requiring enzyme
Length = 205
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 24 TAPVPDSPSQPAILPVTPGQPANIPATSGDS 54
T P+P + P + P P +P N A+S S
Sbjct: 51 TNPIPVADISPTVAPPIPSEPMNKSASSAPS 81
>At3g56130.1 68416.m06238 biotin/lipoyl attachment domain-containing
protein low similarity to SP|Q06881 Biotin carboxyl
carrier protein of acetyl-CoA carboxylase (BCCP)
{Anabaena sp.}; contains Pfam profile PF00364:
Biotin-requiring enzyme
Length = 281
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 24 TAPVPDSPSQPAILPVTPGQPANIPATSGDS 54
T P+P + P + P P +P N A+S S
Sbjct: 127 TNPIPVADISPTVAPPIPSEPMNKSASSAPS 157
>At1g14280.1 68414.m01693 phytochrome kinase, putative contains
similarity to Swiss-Prot:Q9SWI1 phytochrome kinase
substrate 1 [Arabidopsis thaliana]
Length = 442
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 89 SVRTIQDRGDSNHTMIRTPNFAPYYPTYA 117
S ++++ GDS +M RTP++ P +P A
Sbjct: 388 SHKSVRVSGDSYTSMNRTPSYVPRFPVEA 416
>At5g52240.1 68418.m06484 cytochrome b5 domain-containing protein
similar to SP|P70580 Membrane associated progesterone
receptor component 1 {Rattus norvegicus}; contains Pfam
profile PF00173: Heme/Steroid binding domain
Length = 220
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 5 KYITIGTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGGWVL 61
KY +GTV + G + + ++ Q A + TPG+ D AP VL
Sbjct: 163 KYAKVGTVKVAGSEPETASVSEPTENVEQDAHVTTTPGKTV---VDKSDDAPAETVL 216
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 21 PVPTAPVPDSPS---QPAILPVTPGQPANIP 48
P P+ P P PS +P P TPG N P
Sbjct: 56 PSPSVPSPSVPSPNPRPVTPPRTPGSSGNCP 86
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 21 PVPTAPVP---DSPSQPAILPVTPGQPANIPATSGDSAP 56
P P+ P P SPS P++ P TP + P + S+P
Sbjct: 130 PTPSLPPPAPKKSPSTPSLPPPTPKKSPPPPPSHHSSSP 168
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 10 GTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
G+ P + ++ P+ P+P +PS P+ P P + P +P
Sbjct: 68 GSAPAISIS----PSTPIPSTPSTPSPPPPAPKKSPPPPTPKKSPSP 110
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Query: 20 QPVPTAPVPDSPSQPAILPVTPGQPANIPA 49
QP P+AP+ +PS P+ P TP P + P+
Sbjct: 79 QPSPSAPI--TPSPPS--PTTPSNPRSPPS 104
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 23 PTAPVPDSPSQPAILPVTPGQ-PANIPATSGDSAP 56
P+ P P +PS P P +P Q P N P+ S P
Sbjct: 88 PSPPSPTTPSNPR-SPPSPNQGPPNTPSGSTPRTP 121
>At1g62760.1 68414.m07083 invertase/pectin methylesterase
inhibitor family protein low similarity to extensin
[Volvox carteri] GI:21992
Length = 312
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 23 PTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
P++P P PS + ++P + P++S SAP
Sbjct: 65 PSSPPPPPPSSSPLSSLSPSLSPSPPSSSPSSAP 98
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQPANIPAT 50
P P+ P P P P + P P +P P T
Sbjct: 85 PPPSPPPPQLPPPPQLPPPAPPKPQPSPPT 114
>At1g47660.1 68414.m05295 hypothetical protein
Length = 275
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 23 PTAPVPDSP-SQPAILPVTP---GQPANIPATSGDSAP 56
PT P P P + P + P TP G P +PA + + P
Sbjct: 34 PTTPPPARPTTPPPVWPTTPPPAGAPVAVPAAAHVAVP 71
>At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identical
to gi_3883128_gb_AAC77827
Length = 133
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Query: 8 TIGTVPLVGMAGQ-PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
TI +P Q P TAP P + P T P + P T AP
Sbjct: 29 TISPLPATPTPSQSPRATAPAPSPSANPPPSAPTTAPPVSQPPTESPPAP 78
>At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)
Length = 130
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 11 TVPLVGMAGQPVPTAPVPDSPSQPAILPV-TPGQPANIPATSGDS 54
TV +A P P P + PA+ P T P++ P+ S D+
Sbjct: 31 TVTPPPVATPPPAATPAPTTTPPPAVSPAPTSSPPSSAPSPSSDA 75
>At5g48360.1 68418.m05975 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 782
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 13 PLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPA 49
P + P P+ P P P+ P V P PANI A
Sbjct: 51 PFFPLESSP-PSPPPPLPPTPPTTFAVFPTFPANISA 86
>At4g12770.1 68417.m02004 auxilin-related low similarity to
SP|Q27974 Auxilin {Bos taurus}
Length = 909
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 3 DKKYITIGTVPLVGM-AGQPVPTAPVPDSPSQP 34
D ++T+ +PL P PT P P P++P
Sbjct: 351 DDVWLTVSEIPLFTQPTSAPPPTRPPPPRPTRP 383
>At4g08350.1 68417.m01380 KOW domain-containing transcription factor
family protein chromatin structural protein homolog
Supt5hp - Mus musculus,PID:g2754752
Length = 1029
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 2 HDKKYITIGTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANI--PATSGDS 54
H Y + L GQP+ + P P P+TPG ++ P GD+
Sbjct: 866 HGSAYANAPSPYLPSTPGQPMTPSSASYLPGTPGGQPMTPGTGLDVMSPVIGGDA 920
>At2g43800.1 68415.m05445 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 894
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 31 PSQPAILPVTPGQPANIPATSGDSAPG 57
P++P P P Q + +PAT S PG
Sbjct: 406 PARPPPPPPPPPQVSEVPATMSHSLPG 432
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing
protein contains Pfam profiles PF01480: PWI domain,
PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or
RNP domain)
Length = 899
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 21 PVPTAPVPDSPSQPAILP-VTPGQPANIPA 49
P T P P SQP + P V PG P PA
Sbjct: 33 PSLTPPPPQQHSQPPVAPLVPPGPPYAPPA 62
>At1g45688.1 68414.m05202 expressed protein
Length = 342
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Query: 12 VPLVGMAGQ---PVPTAPVPDSPSQ---PAILPVTPGQPANIPAT 50
+PL G P P AP+P + P +P P PA +P T
Sbjct: 248 IPLYGSGSTLLPPAPPAPLPKPKKKKGAPVPIPDPPAPPAPVPMT 292
>At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|O59800 Cell cycle control protein cwf5
{Schizosaccharomyces pombe}, RNA Binding Protein 47
[Nicotiana plumbaginifolia] GI:9663769; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 481
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 18 AGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 58
A P P P P S P+ V+ P + PA SG AP G
Sbjct: 427 AAYPYPQQPGPGSRPAPSPTAVSAISPDSAPAGSG--APSG 465
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 25.8 bits (54), Expect = 8.8
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 10/52 (19%)
Query: 17 MAGQPVPTAPVPDSPSQPAILPVT--PGQPA--------NIPATSGDSAPGG 58
M P P AP S P+ P+T PG A N P S APGG
Sbjct: 234 MTSPPAPMAPKSSSTIPPSSAPMTSPPGSMAPKSSSPVSNSPTVSPSLAPGG 285
>At4g23700.1 68417.m03411 cation/hydrogen exchanger, putative
(CHX17) similar to Na+/H+-exchanging protein slr1595 -
Synechocystis sp., EMBL:D90902; monovalent cation:proton
antiporter family 2 (CPA2) member, PMID:11500563
Length = 820
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 75 YPTLTEPVYKESPYSVRTIQDRGDSNHTMIRTPNFA 110
Y + + V +ESP SV + DRG T + + +F+
Sbjct: 594 YRWINKKVMEESPCSVAILVDRGLGGTTRVASSDFS 629
>At2g16030.1 68415.m01838 expressed protein
Length = 231
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 6 YITIGTVPLVGMAGQPVPTAPVPDSPSQP 34
+++IGTV +V M Q T P++PS+P
Sbjct: 16 FLSIGTVLMVIMILQTPKTCISPEAPSKP 44
>At1g63600.1 68414.m07189 protein kinase-related low similarity to
receptor-like protein kinase 5 [Arabidopsis thaliana]
GI:13506747; contains Pfam profile: PF01657 Domain of
unknown function DUF26
Length = 302
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQP 44
P P P P PS P P+ P P
Sbjct: 256 PPPPYPSPPPPSSPLFSPLLPSPP 279
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.135 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,261,563
Number of Sequences: 28952
Number of extensions: 136117
Number of successful extensions: 644
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 486
Number of HSP's gapped (non-prelim): 175
length of query: 126
length of database: 12,070,560
effective HSP length: 73
effective length of query: 53
effective length of database: 9,957,064
effective search space: 527724392
effective search space used: 527724392
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)
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