Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001432-TA|BGIBMGA001432-PA|undefined
(126 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 35 0.003
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 31 0.042
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 31 0.073
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.22
SPAC16.03c |ura2||dihydroorotase Ura2 |Schizosaccharomyces pombe... 29 0.22
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.29
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.29
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 0.68
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 0.68
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 2.1
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 2.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 2.7
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 25 2.7
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 25 2.7
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 4.8
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 25 4.8
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 24 6.3
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 24 6.3
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 24 6.3
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 24 6.3
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 24 6.3
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 24 8.3
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 24 8.3
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 35.1 bits (77), Expect = 0.003
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
Query: 8 TIGTVPLVG--MAGQPVPTAPVPDSPSQPAILPVTP-GQPAN 46
T ++P V MAGQP+ APVP +P+Q A+ P+ P PAN
Sbjct: 222 TYYSIPAVNHPMAGQPIAIAPVP-APNQAALPPIPPQALPAN 262
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 31.5 bits (68), Expect = 0.042
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 11 TVPLV-GMAGQPVPTAP----VPDSPSQPAILPVTPGQPANIPATSGDSAPG 57
T PL+ G G P+P A +P P +P+ PG P PA G APG
Sbjct: 479 TGPLIYGPGGYPIPAAVNGRGMPMVPGHNGPMPMYPGMPTQFPA--GGPAPG 528
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 30.7 bits (66), Expect = 0.073
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDS 54
P+ VPDSP+ PA P T ++ S DS
Sbjct: 206 PITVTAVPDSPNPPAATPATVADNDDLSIVSSDS 239
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.22
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGGWVLXXXXXXXXXXXXLYPTLTE 80
P+ P P +P PA P P P +PA+S S P L T+T
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAP--PPPLPASSAPSVPNPGDRSALLQQIHTGTRLKKTVTT 1768
Query: 81 PVYKESPYSVRTIQDRGDSN 100
K P + R + D D N
Sbjct: 1769 D--KSKPIAGRVL-DASDGN 1785
Score = 24.6 bits (51), Expect = 4.8
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Query: 19 GQPVPTAP--VPDSPSQPA--ILPVTPGQPANIPATSGDSAP 56
G P AP VP +P + P PG N PA S AP
Sbjct: 1437 GAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAP 1478
>SPAC16.03c |ura2||dihydroorotase Ura2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 337
Score = 29.1 bits (62), Expect = 0.22
Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 77 TLTEPVYKESPYSVRTIQD--RGDSNHTMIRTPNFAPYYPTYAAIQ 120
T E +Y+ + +R ++ +G + ++ ++ P+YPT+AA+Q
Sbjct: 78 TTPEVIYEAAKKGIRGVKSYPKGATTNSESGVESYEPFYPTFAAMQ 123
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 0.29
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 23 PTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
P APV PS P++ P P +P AP
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 26.6 bits (56), Expect = 1.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 21 PVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
P P+ P P S P I P P+++P + +AP
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 25.4 bits (53), Expect = 2.7
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 23 PTAPVPDSPSQPAILPVTPGQP-ANIPATSGDSAP 56
P+AP P +P Q + P T P +IP S SAP
Sbjct: 125 PSAPAPPTP-QSELRPPTSAPPRPSIPPPSPASAP 158
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 0.29
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 13 PLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
P G+ PVPTA P P+ + P +++P+ +++P
Sbjct: 1222 PSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASP 1265
Score = 26.6 bits (56), Expect = 1.2
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 21 PVPTAPVPDS----PSQPAILPVTPGQPANIPATSG 52
P T PVP S PS P +P + +IPA SG
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 27.5 bits (58), Expect = 0.68
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 3 DKKYITIGTVPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQP 44
DKK I ++P + A + + V S +I+P+ P +P
Sbjct: 965 DKKSSLIDSIPALSPAPSSLARSSVSSQRSSTSIIPIKPNKP 1006
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.5 bits (58), Expect = 0.68
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 13 PLVGMAGQPVPTAPV-PDSPS--QPAILPVTPGQPA 45
P V QP P APV P++PS QP + PV P P+
Sbjct: 584 PEVPSVPQP-PVAPVVPEAPSVPQPPVAPVAPEVPS 618
Score = 26.2 bits (55), Expect = 1.6
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 9 IGTVPLVGMAGQPVPTAPV-PDSPS--QPAILPVTPGQPA 45
+ VP QP P APV P+ PS QP + PV P P+
Sbjct: 565 VPVVPEALSVPQP-PVAPVAPEVPSVPQPPVAPVVPEAPS 603
Score = 25.4 bits (53), Expect = 2.7
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 12 VPLVGMAGQP--VPTAPVPDSPSQPAILPVTPGQPANIPATSGD 53
VP V QP VP P ++P + P+ P P GD
Sbjct: 673 VPEVPSVPQPPAVPVVPEAGQLNEPVVPPLPPHDETQEPQVGGD 716
Score = 24.6 bits (51), Expect = 4.8
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
Query: 20 QPVPTAPV-PDSPS--QPAILPVTPGQPA 45
QP P APV P++PS QP PV P P+
Sbjct: 516 QP-PAAPVVPEAPSVHQPPAAPVAPEVPS 543
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 2.1
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 12 VPLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGG 58
+P + M+ P+ + P PA P P PA +P G +AP G
Sbjct: 514 MPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPA-MPGIPGATAPPG 559
Score = 25.8 bits (54), Expect = 2.1
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Query: 16 GMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPGGW 59
GMA P AP P P+ PA +P PG AT+ APG +
Sbjct: 528 GMALPPGMPAPFPGYPAVPA-MPGIPG------ATAPPGAPGSY 564
Score = 24.6 bits (51), Expect = 4.8
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 22 VPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPG 57
VP+ P P A LP T P +P APG
Sbjct: 478 VPSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAPG 513
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 2.7
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 100 NHTMIRTPNFAPYYPTYAAIQPPPLP 125
NHT+ +F PY ++A QPP LP
Sbjct: 299 NHTL---QSFHPYESLFSAGQPPSLP 321
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 2.7
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 18 AGQP--VPTAPVPDS--PSQPAILPVTPGQPANIPATSGDSA 55
AG P PT+ +P + P+ + PG PA +P T ++A
Sbjct: 1893 AGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTGKETA 1934
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 25.4 bits (53), Expect = 2.7
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 8 TIGTVPLVGM----AGQPVP----TAPVPDSPSQPAILPVTPGQPANIPAT 50
T T+P + A QPV T+P+P +P + L VTP PA+
Sbjct: 577 TFDTLPTISQGLLAATQPVTSVLNTSPLPKTPEKDRSLNVTPSSSTPTPAS 627
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 2.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 9 IGTVPLVGMAGQPVPTAPVPDSPSQPA 35
+ + PL PVP +P+ SP++P+
Sbjct: 303 VSSYPLSRSVSTPVPMSPISISPAKPS 329
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 24.6 bits (51), Expect = 4.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 23 PTAPV--PDSPSQPAILPVTPGQPANIPA 49
P+ P+ P +P P P+ P PA +PA
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPA 465
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 24.6 bits (51), Expect = 4.8
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 17 MAGQPVPTAPVPDSPSQPAILPVTPGQP 44
+A PVPT P PS PA P P P
Sbjct: 551 IAPSPVPTIIAPALPSTPA--PPLPSHP 576
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 24.2 bits (50), Expect = 6.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 23 PTAPVPDSPSQPAILPV--TPGQPANIPATS 51
P PVP SP AI PV P N+ TS
Sbjct: 590 PADPVPTSPKPLAIEPVKRKPVHAGNLEVTS 620
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 24.2 bits (50), Expect = 6.3
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 15 VGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAP 56
V + + V AP P S+P+ + P QP+ ++ P
Sbjct: 289 VAKSKKKVTPAPAPAPESEPSKPSIAPSQPSKTNVSAAYEKP 330
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 24.2 bits (50), Expect = 6.3
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 13 PLVGMAGQPVPTAPVPDSPSQPAILPVTPGQPANIPATSGDSAPG 57
P + + P P P P+SP P+ L + P T DS G
Sbjct: 589 PTIDYSATPFPLEPPPESPG-PS-LQIPSNNPVYTNLTDTDSMMG 631
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 24.2 bits (50), Expect = 6.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 23 PTAPVPDSPSQPAILPVTPGQP 44
P+APV ++ S+P+ +P P P
Sbjct: 1080 PSAPVANNVSKPSAVPPPPPPP 1101
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 24.2 bits (50), Expect = 6.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 22 VPTAPVPDSPSQPAILPVTPGQPANIPATSGDS 54
+P+ P P + S+P + + A+IP+T+ S
Sbjct: 449 IPSKPAPVNASRPMMPQQSNNSEASIPSTTPQS 481
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 23.8 bits (49), Expect = 8.3
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 5 KYITIGTVPLVGMAGQPVPTAPVP 28
KY+++GT+ L ++G + T+ P
Sbjct: 193 KYLSVGTITLTTISGSDLYTSTFP 216
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 23.8 bits (49), Expect = 8.3
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 79 TEPVYKESPYSVRTIQDRGDSNHTMIRTPNFAPYYPTYAAIQPP 122
+EP+++ S TI GD+ + + + N + T A PP
Sbjct: 489 SEPIFRSDTASPETIAGLGDTKNDPVVSTNNSVSRITVANSSPP 532
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.135 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,499
Number of Sequences: 5004
Number of extensions: 24865
Number of successful extensions: 95
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 56
Number of HSP's gapped (non-prelim): 43
length of query: 126
length of database: 2,362,478
effective HSP length: 65
effective length of query: 61
effective length of database: 2,037,218
effective search space: 124270298
effective search space used: 124270298
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 49 (23.8 bits)
- SilkBase 1999-2023 -