GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001432-TA|BGIBMGA001432-PA|undefined
         (126 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   1.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   1.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   7.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   9.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   9.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   9.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 27   VPDSPSQPAILPVTPGQPANIPATSGDSAPGGWVL 61
            +  SPS P +   T GQ   IP  +   +P    L
Sbjct: 1481 IGSSPSSPVLSVRTQGQAPGIPPAATFLSPNSTTL 1515


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 27   VPDSPSQPAILPVTPGQPANIPATSGDSAPGGWVL 61
            +  SPS P +   T GQ   IP  +   +P    L
Sbjct: 1477 IGSSPSSPVLSVRTQGQAPGIPPAATFLSPNSTTL 1511


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 88  YSVRTIQDRGDSNHTMIRTPNFAPYYPT 115
           Y  R   D G+ ++  +  P    YYPT
Sbjct: 270 YLERLSNDMGEVSYVSLDHPIPTGYYPT 297


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 75  YPTLTEPVYKESPYSVRTIQDR 96
           +  LT+P    + Y V T+ D+
Sbjct: 447 FDVLTDPKKNPNVYKVETVGDK 468


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/26 (26%), Positives = 14/26 (53%)

Query: 8    TIGTVPLVGMAGQPVPTAPVPDSPSQ 33
            ++G+   + ++G P P  P P +  Q
Sbjct: 1844 SVGSARNIPVSGSPEPPPPPPRNHDQ 1869


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 75  YPTLTEPVYKESPYSVRTIQDR 96
           +  LT+P    + Y V T+ D+
Sbjct: 447 FDVLTDPKKNPNVYKVETVGDK 468


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.135    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,877
Number of Sequences: 429
Number of extensions: 2149
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 126
length of database: 140,377
effective HSP length: 51
effective length of query: 75
effective length of database: 118,498
effective search space:  8887350
effective search space used:  8887350
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.5 bits)
S2: 39 (19.8 bits)