Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001431-TA|BGIBMGA001431-PA|IPR011021|Arrestin,
N-terminal, IPR011022|Arrestin, C-terminal
(286 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0684 - 26264540-26264661,26264926-26264989,26267168-262673... 29 3.2
11_06_0460 + 23836034-23836083,23836175-23836318,23836397-238364... 29 3.2
05_01_0089 + 589457-589506,589598-589741,589820-589903,590118-59... 29 3.2
02_02_0186 + 7594197-7594281,7594409-7594513,7595062-7595238,759... 29 4.3
01_01_0363 + 2850954-2853675,2853819-2854225 29 5.7
03_02_0127 + 5777564-5779879 28 7.5
11_06_0275 - 21818071-21818192,21818457-21818520,21820699-218209... 28 9.9
07_03_0393 - 17630097-17630367,17630483-17630709 28 9.9
01_01_1096 - 8659091-8659459,8660730-8661050,8661416-8661694,866... 28 9.9
>11_06_0684 -
26264540-26264661,26264926-26264989,26267168-26267371,
26268322-26268456,26269174-26269492,26269581-26269631,
26269721-26269864,26270080-26270160,26270252-26270302,
26270392-26270535,26270750-26270833,26270912-26271055,
26271147-26271196
Length = 530
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 35 KKVRGIHVKIKGEAHTELYESKQEENAQGKTESTDTMHTGNEEYFQISYYLLGSNTGNEI 94
K+ R + ++ G T+ Y S E NA + D TG FQ+S ++TGN +
Sbjct: 36 KRKRKLDLRRSGSPSTKNYSSADETNALQRKRKLDEKRTG----FQMSNNESSADTGNPL 91
Query: 95 E 95
+
Sbjct: 92 Q 92
>11_06_0460 +
23836034-23836083,23836175-23836318,23836397-23836480,
23836695-23836838,23836928-23836978,23837070-23837150,
23837366-23837509,23837599-23837649,23837738-23838056,
23839994-23840062,23840378-23840698,23841218-23841583,
23842241-23842304,23842569-23842690
Length = 669
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 35 KKVRGIHVKIKGEAHTELYESKQEENAQGKTESTDTMHTGNEEYFQISYYLLGSNTGNEI 94
K+ R + ++ G T+ Y S E NA + D TG FQ+S ++TGN +
Sbjct: 36 KRKRKLDLRRSGSPSTKNYSSADETNALQRKRKLDEKRTG----FQMSNNESSADTGNPL 91
Query: 95 E 95
+
Sbjct: 92 Q 92
>05_01_0089 +
589457-589506,589598-589741,589820-589903,
590118-590261,590351-590401,590492-590641,
591175-591488,592685-592815,593131-593451,
594994-595057,595322-595443
Length = 524
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 35 KKVRGIHVKIKGEAHTELYESKQEENAQGKTESTDTMHTGNEEYFQISYYLLGSNTGNEI 94
K+ R + ++ G T+ Y S E NA + D TG FQ+S ++TGN +
Sbjct: 36 KRKRKLDLRRSGSPSTKNYSSADETNALQRKRKLDEKRTG----FQMSNNESSADTGNPL 91
Query: 95 E 95
+
Sbjct: 92 Q 92
>02_02_0186 +
7594197-7594281,7594409-7594513,7595062-7595238,
7595716-7595886,7596198-7596289,7596302-7596407,
7597516-7597601,7597861-7598501,7599065-7599107
Length = 501
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 79 FQISYYLLGSNTGNEIEIPQGKHIYNFTCTLPPVLPSSFEGE 120
F + + GS+T +IE P+ +H + T PP++ S + E
Sbjct: 260 FSVVQHGFGSSTAEKIEAPEDEHQESSTVGKPPLVVESLKEE 301
>01_01_0363 + 2850954-2853675,2853819-2854225
Length = 1042
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 57 QEENAQGKTESTDTMHTGNEEYFQISYYLL--GSNTGNEIE-IPQGKHIYNFTCTL 109
Q +G+ S + E+Y +ISYY L GSN +E + +G++ + CTL
Sbjct: 685 QHRKLKGRQNSQEISPVIEEQYQRISYYALSRGSNEFSEANLLGKGRYGSVYKCTL 740
>03_02_0127 + 5777564-5779879
Length = 771
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 32 DSPKKVRGIHVKIKGEAHTELYESKQEENA-QGKTESTDTMHTGNEEYFQISYYLLGSNT 90
++ ++ VK ++ E +EE A +G ES + + G E++ + LGS +
Sbjct: 427 ENSSEIEADGVKANASMESQDAEGNEEEEAHEGLQESIEQLALG-EKHAKEPGSFLGSTS 485
Query: 91 GNEIEIPQGKHIY-NFTCTLP----PVLPSSFEGE 120
GN +E + I+ +T P P+ +S +GE
Sbjct: 486 GNTVEDVKADEIFEGWTNNSPSHCQPISETSSDGE 520
>11_06_0275 -
21818071-21818192,21818457-21818520,21820699-21820902,
21821852-21821986,21822704-21823022,21823111-21823161,
21823251-21823394,21823610-21823690,21823782-21823832,
21823922-21824065,21824280-21824363,21824442-21824585,
21824677-21824726
Length = 530
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 35 KKVRGIHVKIKGEAHTELYESKQEENAQGKTESTDTMHTGNEEYFQISYYLLGSNTGNEI 94
K+ R + ++ G T+ Y S E N + D TG FQ+S ++TGN +
Sbjct: 36 KRKRKLDLRRSGSPSTKNYSSADETNVLQRKRKLDEKRTG----FQMSNNESSADTGNPL 91
Query: 95 E 95
+
Sbjct: 92 Q 92
>07_03_0393 - 17630097-17630367,17630483-17630709
Length = 165
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 178 ASPPLAVDVQAPVSGYCPGQVIPLKIDI 205
+ P L D +P+ C G+V+P+K+++
Sbjct: 105 SDPNLGADNASPLLSDCTGEVVPVKVEL 132
>01_01_1096 -
8659091-8659459,8660730-8661050,8661416-8661694,
8661781-8661897,8662142-8662210,8663204-8663397,
8663552-8663633
Length = 476
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 93 EIEIPQGKHIYNFTCT--LPPVLPSSFEGEHGYVRYTVKVTLDRP 135
E+ P+ ++ N C P P ++ ++GY RY V D P
Sbjct: 335 ELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 379
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.135 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,081,162
Number of Sequences: 37544
Number of extensions: 396560
Number of successful extensions: 778
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 776
Number of HSP's gapped (non-prelim): 9
length of query: 286
length of database: 14,793,348
effective HSP length: 81
effective length of query: 205
effective length of database: 11,752,284
effective search space: 2409218220
effective search space used: 2409218220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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