GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001431-TA|BGIBMGA001431-PA|IPR011021|Arrestin,
N-terminal, IPR011022|Arrestin, C-terminal
         (286 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.6  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/26 (23%), Positives = 16/26 (61%)

Query: 4   KEANIYLDNQWNTYYAGQTVNGRIEY 29
           K  ++Y  +QW  + + + ++ ++EY
Sbjct: 320 KNTHMYKGDQWVAFDSPKAISNKVEY 345


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 203 IDIENKSNVQLHLVKIFLRKVVTYRATSPSSATKKIKDVILTLQEG 248
           + IEN      H +K    KV+  R T  S +TK+    + TL  G
Sbjct: 759 LQIENVEQTLNHEIK----KVIPGRITQKSCSTKRYVTPVNTLVRG 800


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.135    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,782
Number of Sequences: 317
Number of extensions: 3610
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 286
length of database: 114,650
effective HSP length: 56
effective length of query: 230
effective length of database: 96,898
effective search space: 22286540
effective search space used: 22286540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)