Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001431-TA|BGIBMGA001431-PA|IPR011021|Arrestin,
N-terminal, IPR011022|Arrestin, C-terminal
(286 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14467| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 1e-23
SB_37987| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_22838| Best HMM Match : Arrestin_N (HMM E-Value=1.1e-30) 79 3e-15
SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-14
SB_14465| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_54257| Best HMM Match : Cache (HMM E-Value=4.4e-09) 32 0.47
SB_20998| Best HMM Match : Extensin_2 (HMM E-Value=0.002) 31 1.4
SB_51384| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 29 5.8
SB_33123| Best HMM Match : Ubiq_cyt_C_chap (HMM E-Value=7.9) 28 7.6
>SB_14467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 107 bits (257), Expect = 1e-23
Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 22/263 (8%)
Query: 36 KVRGIHVKIKGEAHT-----ELYES--KQEE-NAQGKTESTDTMHTGNEEYFQISYYLL- 86
K R +HV+ GEA T E Y + K EE KT +H +S Y+
Sbjct: 52 KFRSVHVEFHGEARTNWDEIENYTTTHKNEEVYFNKKTSLLANVHLYRAVLIYLSGYVYD 111
Query: 87 --GSNTGNEIEIPQGKHIYNFTCTLPPV-LPSSFEGEHGYVRYTVKVTLDRPWKFDQETK 143
G + G+H F+ +PP LPSSFE HG+VRY ++ + RPW+FD+ TK
Sbjct: 112 FAGDKKRAVSVLSAGRHALEFSFKIPPFSLPSSFESTHGHVRYYLRARISRPWRFDEVTK 171
Query: 144 MAFTVINALDLNLNPSYKEPIHIQLEKTFCCFC-CASPPLAVDVQAPVSGYCPGQVIPLK 202
+ VI+ +D+N +P P+ + +K C C + PL V S YCPG+ + L
Sbjct: 172 LQVHVIDLIDVN-SPRLLMPVFGEAQKALNCLCNGTAAPLHALVYTDRSAYCPGERLTLT 230
Query: 203 IDIENKSNVQLHLVKIFLRKVVTYRATSPSSATKKIKDVILTLQEGPAPAGTTKHWNLNI 262
+I N + + ++L + +TY+ S T+ + + LQ +
Sbjct: 231 TEIRNFPLREPYETCVYLVQSITYK--SSCGRTRSVNKQVKVLQRSSMSLELDE-----F 283
Query: 263 EIPPIPPSNLVNCNIIDLDYDLK 285
E+P + P+ + NC I+ + Y LK
Sbjct: 284 EVPDVVPT-MRNCGIVSICYHLK 305
>SB_37987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 89.4 bits (212), Expect = 3e-18
Identities = 53/153 (34%), Positives = 79/153 (51%), Gaps = 11/153 (7%)
Query: 8 IYLDNQWNTYYAGQTVNGRIEYVFDSPKKVRGIHVKIKGEAHTELYESKQEENAQGKTES 67
I L + +Y G+ +NG + + K RGI ++ GEA+ ES + G
Sbjct: 9 ITLTGEKRVFYPGEVLNGSVYLKLNKELKTRGIRLEFHGEANVRWSES----SGSGNNRR 64
Query: 68 TDTMHTGNEEYFQISYYLLGSNTG----NEIEIPQGKHIYNFTCTLPPV-LPSSFEGEHG 122
T T + E Y L G + G N + P G++ Y F+ +P LP+SFEG G
Sbjct: 65 TRT-YRNQEVYINTVATLYGKDPGQGGDNPVH-PPGEYSYPFSFIIPQQNLPTSFEGNFG 122
Query: 123 YVRYTVKVTLDRPWKFDQETKMAFTVINALDLN 155
+VRY +K +DRPW+FD TK AF++I +D+N
Sbjct: 123 HVRYWLKAIIDRPWRFDVTTKAAFSMIEFVDIN 155
>SB_22838| Best HMM Match : Arrestin_N (HMM E-Value=1.1e-30)
Length = 173
Score = 79.4 bits (187), Expect = 3e-15
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 8 IYLDNQWNTYYAGQTVNGRIEYVFDSPKKVRGIHVKIKGEAHT-----ELYES--KQEE- 59
I L+ + Y+ G+ V+G K R +HV+ GEA T E Y + K EE
Sbjct: 9 IVLNRKNRIYHPGEVVSGECVVYSKESLKFRSVHVEFHGEARTNWDEMENYTTTHKNEEV 68
Query: 60 NAQGKTESTDTMHTGNEEYFQISYYLL---GSNTGNEIEIPQGKHIYNFTCTLPPV-LPS 115
KT +H +S Y+ G + G+H F+ +PP LPS
Sbjct: 69 YFNKKTSLLANVHLYRAVLIYLSGYVYDFAGDKKRAVSVLSAGRHALEFSFKIPPFSLPS 128
Query: 116 SFEGEHGYVRYTVKVTLDRPWKFDQETKMAFTVINALDLN 155
SFE HG+VRY ++ + RPW+FD+ TK+ VI+ +D+N
Sbjct: 129 SFESTHGHVRYYLRARISRPWRFDEVTKLQVHVIDLIDVN 168
>SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 75.8 bits (178), Expect = 4e-14
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 22/291 (7%)
Query: 1 MGLKEANIYLDNQWNTYYAGQTVNGRIEYVFDSPKKVRGIHVKIKGEAHTELYESKQEEN 60
M ++ I LD + Y G V+G + + +VR I++ G E+ E +
Sbjct: 1 MTIENYAIELDRKDLVYTLGDYVSGEVRFTLTKEIRVREIYLHFFGRGKVEVMEGR---- 56
Query: 61 AQGKTESTDTMHTGNEEYFQISYYLLGSN--TGNEIEIPQGKHIYNFTCTLP--PVLPSS 116
T G +EY++ LL G + G++ Y F+ LP LP +
Sbjct: 57 ---------TTFIGKQEYYRHVAELLDKEKVAGMNGILKPGEYKYPFSFELPFDGDLPGT 107
Query: 117 FEGEHGYVRYTVKVTLDRPWKFDQETKMAFTVINALDLNLNPSYKEPIHIQLEKTFCCFC 176
+E +HGY++Y+++ +DRP +T TVI+ ++ ++ + EP Q C
Sbjct: 108 YEAKHGYIKYSLEALIDRPLMTPAKTGTLITVIDYVE--IDKTLLEPRQKQENWHVGYNC 165
Query: 177 CASPPLAVDVQAPVSGYCPGQVIPLKIDIENKSNVQLHLVKIFLRKVVTY-RATSPSSAT 235
CAS L V + +G+ G + + ++N+S + V+I L + TY T +
Sbjct: 166 CASGSLTVTAKIDRAGFYIGDEAQVTVFLDNQSTRDVTDVEICLFQFTTYIYGTDENEYQ 225
Query: 236 KKIKDVILTLQEGPAPAGTTKHWNLNIEIPPIPPSNLVNCNIIDLDYDLKV 286
K + + +EG A ++ I IP + P++L II Y ++V
Sbjct: 226 VKDRLIDSVKREGVARGKEVIIDDVTITIPQLRPTSLY--GIITTAYTIEV 274
>SB_14465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 44.4 bits (100), Expect = 1e-04
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 163 PIHIQLEKTFCCFCCASP-PLAVDVQAPVSGYCPGQVIPLKIDIENKSNVQLHLVKIFLR 221
P+ + +K C C + PL V S YCPG+ + L +I N + + ++L
Sbjct: 2 PVFGEAQKALNCLCNGTAAPLHALVYTDRSAYCPGERLTLTTEIRNLPLREPYETCVYLV 61
Query: 222 KVVTYRATSPSSATKKIKDVILTLQEGPAPAGTTKHWNLNIEIPPIPPSNLVNCNIIDLD 281
+ +TY+ S T+ + + LQ + E+P + P+ + NC I+ +
Sbjct: 62 QSITYK--SSCGRTRSVNKQVKVLQRSSMSLELDE-----FEVPDVVPT-MRNCGIVSIC 113
Query: 282 YDLK 285
Y LK
Sbjct: 114 YHLK 117
>SB_54257| Best HMM Match : Cache (HMM E-Value=4.4e-09)
Length = 820
Score = 32.3 bits (70), Expect = 0.47
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Query: 62 QGKTESTDTMHTGNEEYFQISYYLLGSNTGNEIEIPQGKHIYNFTCTLPPVLPSSFEGEH 121
QG+ +T + IS+ G++TGN ++ P + N + + P S +
Sbjct: 152 QGENSLVNTFRNNLVDSSVISWQYFGTSTGNYLQFPASGKVCNGSSSFDPRFQSWYVEAV 211
Query: 122 GYVRYTVKVTLDRPWKFDQETKMAF---TVINALDLNLNPSYK 161
+R + V +DR +MA + LD L P+ K
Sbjct: 212 TRMRTNIVVVIDRSSSMSTAGRMALARQAAVTVLD-TLGPNDK 253
>SB_20998| Best HMM Match : Extensin_2 (HMM E-Value=0.002)
Length = 765
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 177 CASPPLAVDVQAPVSGY---CPGQVIPLKIDIENKSNVQLHLVKIFLRKVVTYRATSPSS 233
C+SPP ++ Q PV Y P + + + + +++ + ++V +R SP
Sbjct: 539 CSSPPFSMTKQVPVYRYHSPRPSRCLSIDTILHDQAGACPSIPFSMTKQVPVHRYHSPRP 598
Query: 234 ATKKIKDVILTLQEGPAPA---GTTKHWNLNIEIPPIP 268
+T IL Q G P+ TTKH ++ P P
Sbjct: 599 STCLFIATILHDQAGACPSIPFSTTKHVPVHRHHSPRP 636
>SB_51384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 58 EENAQGKT-ESTDTMHTGNEEYFQISY-YLLGSNTGNEIEIPQGKHIYNFTCTLPPVLPS 115
E++ +G T ++ D + + +++ L+ T N+++ H++ F P+ P
Sbjct: 135 EQHVRGFTLKAPDNISIPKDGEWEVGLSQLIYPQTWNQVDPEYEYHLWVFPSKAEPLQPD 194
Query: 116 SFEGEHGYVRYTVKVTLDRPWKFDQETKMAFTVINA--LDLNLNPSYKEPIH 165
+H + + TV L W FD K A+ +N D+ + P+H
Sbjct: 195 ETTRKHVWQKITVG-PLRSVWPFDVYKKPAYNKLNQPYFDVEVGRDAWWPVH 245
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 28 EYVFDSPKKVRGIHVKIKGEAHTELYESKQEENAQGKTESTDTMHTGNEEYFQISYYLLG 87
E ++ PK++ + KIK EA E E +E + + E T + ++ + +
Sbjct: 231 ESIWTEPKELTELKEKIKAEAEAENQEEGEESEEEEEEEKPATQNEAKQDTSATNTQAVP 290
Query: 88 SNTG-NEIEIP 97
S + N EIP
Sbjct: 291 SASAVNTSEIP 301
>SB_33123| Best HMM Match : Ubiq_cyt_C_chap (HMM E-Value=7.9)
Length = 271
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 218 IFLRKVVTYRATSPSSATKKIKDVILTLQEGPAPAGTTK 256
I ++ V Y + ATKKI+D I+ L +G P T K
Sbjct: 192 IQVKSVERYIIPNAQKATKKIRDRIMKLFKGAVPWATPK 230
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.135 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,589,096
Number of Sequences: 59808
Number of extensions: 460117
Number of successful extensions: 865
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 851
Number of HSP's gapped (non-prelim): 11
length of query: 286
length of database: 16,821,457
effective HSP length: 81
effective length of query: 205
effective length of database: 11,977,009
effective search space: 2455286845
effective search space used: 2455286845
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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